Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8022E11.3
        

               Conread position:
               148-381
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               63, 89
               

               Conread position:
               157-501
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               157-533
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 79
               

               Conread position:
               157-765
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 52
               

               Conread position:
               157-765
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 79
               

               Conread position:
               157-766
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 16
               

               Conread position:
               158-418
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               158-425
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 78
               

               Conread position:
               158-478
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               48, 79
               

               Conread position:
               158-499
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 39
               

               Conread position:
               158-529
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               54, 16
               

               Conread position:
               158-765
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 79
               

               Conread position:
               158-767
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 25
               

               Conread position:
               158-768
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 21
               

               Conread position:
               158-769
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 73
               

               Conread position:
               159-767
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 77
               

               Conread position:
               160-398
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               160-404
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               49, 42
               

               Conread position:
               160-767
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 76
               

               Conread position:
               161-766
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 76
               

               Conread position:
               163-726
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 49
               

               Conread position:
               167-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 69
               

               Conread position:
               167-535
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               265
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               45, 15
               

               Conread position:
               191-477
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               63, 54
               

               Conread position:
               193-766
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 41
               

               Conread position:
               203-379
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               49, 32
               

               Conread position:
               209-766
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 26
               

               Conread position:
               217-560
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               253
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               39, 10
               

               Conread position:
               221-558
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 164
               

               Conread position:
               252-418
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               131, 42
               

               Conread position:
               255-418
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               255-766
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 35
               

               Conread position:
               275-620
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 77
               

               Conread position:
               283-493
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               284-490
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               327-621
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               220
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               64, 121
               

               Conread position:
               344-726
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               270
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               7, 23
               

               Conread position:
               361-771
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 74
               

               Conread position:
               377-754
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               28, 9
               

               Conread position:
               377-768
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 168
               

               Conread position:
               378-526
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               387-653
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               387-690
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               33, 9
               

               Conread position:
               425-749
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               74, 103
               

               Conread position:
               439-766
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 99
               

               Conread position:
               450-732
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 46
               

               Conread position:
               460-765
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               239
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               44, 71
               

               Conread position:
               460-767
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 64
               

               Conread position:
               460-767
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 78
               

               Conread position:
               465-756
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               39, 75
               

               Conread position:
               466-755
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               124, 73
               

               Conread position:
               468-766
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               35, 60
               

               Conread position:
               477-753
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               213
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               479-680
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               25, 19
               

               Conread position:
               486-769
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               105, 16
               

               Conread position:
               488-753
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               99, 10
               

               Conread position:
               496-771
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               501-766
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 36
               

               Conread position:
               520-766
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               70, 46
               

               Conread position:
               538-758
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               74, 158
               

               Conread position:
               539-766
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               53, 27
               

               Conread position:
               543-766
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               49, 199
               

               Conread position:
               544-766
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 194
               

               Conread position:
               547-764
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               548-686
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               42, 117
               

               Conread position:
               556-757
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               29, 64
               

               Conread position:
               556-758
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               36, 44
               

               Conread position:
               560-767
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               571-769
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               19, 32
               

               Conread position:
               572-739
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               573-765
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               19, 34
               

               Conread position:
               610-768
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               155, 38
               

               Conread position:
               617-766
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               621-754
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               621-764
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               52, 114
               

               Conread position:
               621-766
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               25, 113
               
Show alignments to all cow chromosomes.