Cow genome map

Conread name: Ss1.1-Pig3-SRG8022E11.3

Conread position: 143-379
Cow position:
Alignm length: 241
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 95

Conread position: 158-344
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 78

Conread position: 158-380
Cow position:
Alignm length: 224
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 32

Conread position: 158-490
Cow position:
Alignm length: 336
Alignm identity: 233
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 54, 67

Conread position: 158-565
Cow position:
Alignm length: 410
Alignm identity: 287
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 44, 25

Conread position: 158-631
Cow position:
Alignm length: 490
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 78

Conread position: 158-765
Cow position:
Alignm length: 632
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 78

Conread position: 158-766
Cow position:
Alignm length: 626
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 76

Conread position: 159-381
Cow position:
Alignm length: 228
Alignm identity: 156
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 94

Conread position: 159-497
Cow position:
Alignm length: 343
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 14

Conread position: 159-567
Cow position:
Alignm length: 416
Alignm identity: 282
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 52, 77

Conread position: 160-359
Cow position:
Alignm length: 203
Alignm identity: 149
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 53, 45

Conread position: 163-554
Cow position:
Alignm length: 405
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 72

Conread position: 166-691
Cow position:
Alignm length: 538
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 10

Conread position: 167-484
Cow position:
Alignm length: 332
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 70

Conread position: 245-404
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 90, 0

Conread position: 291-766
Cow position:
Alignm length: 487
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 78

Conread position: 294-766
Cow position:
Alignm length: 481
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 79

Conread position: 318-766
Cow position:
Alignm length: 458
Alignm identity: 310
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 45, 69

Conread position: 319-510
Cow position:
Alignm length: 208
Alignm identity: 149
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 77, 24

Conread position: 328-765
Cow position:
Alignm length: 449
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 58

Conread position: 341-518
Cow position:
Alignm length: 185
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 78, 122

Conread position: 364-720
Cow position:
Alignm length: 368
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 32

Conread position: 375-725
Cow position:
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 377-688
Cow position:
Alignm length: 325
Alignm identity: 234
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 43, 153

Conread position: 378-674
Cow position:
Alignm length: 308
Alignm identity: 217
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 42, 9

Conread position: 420-765
Cow position:
Alignm length: 369
Alignm identity: 268
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 16, 117

Conread position: 444-758
Cow position:
Alignm length: 319
Alignm identity: 220
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 157, 42

Conread position: 447-765
Cow position:
Alignm length: 328
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 48

Conread position: 456-754
Cow position:
Alignm length: 309
Alignm identity: 220
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 40, 73

Conread position: 460-633
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 57

Conread position: 460-766
Cow position:
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 68

Conread position: 460-766
Cow position:
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 71

Conread position: 473-766
Cow position:
Alignm length: 297
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 64

Conread position: 479-766
Cow position:
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 59

Conread position: 483-766
Cow position:
Alignm length: 290
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 55

Conread position: 488-753
Cow position:
Alignm length: 271
Alignm identity: 193
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 11, 51

Conread position: 489-740
Cow position:
Alignm length: 260
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 49

Conread position: 492-700
Cow position:
Alignm length: 227
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 163

Conread position: 502-766
Cow position:
Alignm length: 276
Alignm identity: 200
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 90, 18

Conread position: 503-765
Cow position:
Alignm length: 263
Alignm identity: 187
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 536-732
Cow position:
Alignm length: 206
Alignm identity: 158
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 53, 129

Conread position: 536-766
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 211

Conread position: 547-714
Cow position:
Alignm length: 174
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 22

Conread position: 551-766
Cow position:
Alignm length: 220
Alignm identity: 170
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 33, 94

Conread position: 561-764
Cow position:
Alignm length: 214
Alignm identity: 167
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 31, 109

Conread position: 571-767
Cow position:
Alignm length: 204
Alignm identity: 160
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 21, 32

Conread position: 589-766
Cow position:
Alignm length: 186
Alignm identity: 145
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 29, 150

Conread position: 589-769
Cow position:
Alignm length: 185
Alignm identity: 139
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 21, 56

Conread position: 605-765
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 27, 9

Conread position: 609-726
Cow position:
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 610-766
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 100, 108

Conread position: 610-766
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 66, 83

Conread position: 614-765
Cow position:
Alignm length: 152
Alignm identity: 119
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 617-770
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 118

Conread position: 625-766
Cow position:
Alignm length: 143
Alignm identity: 115
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 16, 108

Conread position: 648-766
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 0

Show alignments to all cow chromosomes.