Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8022E11.3
        

               Conread position:
               155-390
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               9, 55
               

               Conread position:
               157-374
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               54, 79
               

               Conread position:
               157-569
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 74
               

               Conread position:
               157-725
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 79
               

               Conread position:
               158-329
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               54, 13
               

               Conread position:
               158-331
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               158-332
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               52, 72
               

               Conread position:
               158-358
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               54, 68
               

               Conread position:
               158-373
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               52, 70
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               90, 46
               

               Conread position:
               158-411
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               158-416
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               91, 77
               

               Conread position:
               158-555
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 45
               

               Conread position:
               158-660
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               158-706
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               158-765
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 68
               

               Conread position:
               158-766
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 78
               

               Conread position:
               158-766
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               159-774
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 77
               

               Conread position:
               160-343
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               50, 70
               

               Conread position:
               160-381
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               39, 90
               

               Conread position:
               160-535
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 77
               

               Conread position:
               160-764
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 43
               

               Conread position:
               162-379
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               49, 74
               

               Conread position:
               166-376
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               40, 89
               

               Conread position:
               166-390
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               44, 70
               

               Conread position:
               167-380
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               47, 20
               

               Conread position:
               167-647
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 70
               

               Conread position:
               167-679
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 69
               

               Conread position:
               169-766
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 169
               

               Conread position:
               176-484
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 44
               

               Conread position:
               178-767
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 28
               

               Conread position:
               187-766
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 16
               

               Conread position:
               255-523
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               62, 138
               

               Conread position:
               257-507
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               122, 32
               

               Conread position:
               257-756
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 28
               

               Conread position:
               261-758
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 33
               

               Conread position:
               265-766
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 20
               

               Conread position:
               275-766
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 48
               

               Conread position:
               286-766
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 69
               

               Conread position:
               291-641
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 204
               

               Conread position:
               295-766
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 52
               

               Conread position:
               334-580
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               85, 49
               

               Conread position:
               358-756
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 182
               

               Conread position:
               366-689
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               54, 32
               

               Conread position:
               374-699
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               99, 9
               

               Conread position:
               378-716
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               10, 54
               

               Conread position:
               378-765
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               272
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               11, 63
               

               Conread position:
               387-757
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               58, 34
               

               Conread position:
               388-755
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               10, 152
               

               Conread position:
               416-674
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               417-766
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               232
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               83, 23
               

               Conread position:
               418-764
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               171, 11
               

               Conread position:
               418-766
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               425-703
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               10, 66
               

               Conread position:
               426-766
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               46, 71
               

               Conread position:
               430-766
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 8
               

               Conread position:
               439-766
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               234
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               63, 99
               

               Conread position:
               447-726
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 91
               

               Conread position:
               447-746
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 251
               

               Conread position:
               451-768
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 43
               

               Conread position:
               460-756
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               43, 127
               

               Conread position:
               460-761
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 12
               

               Conread position:
               460-766
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 21
               

               Conread position:
               465-769
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 20
               

               Conread position:
               473-766
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 65
               

               Conread position:
               475-721
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               11, 27
               

               Conread position:
               476-766
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               14, 64
               

               Conread position:
               477-685
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               47, 92
               

               Conread position:
               477-757
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               26, 61
               

               Conread position:
               477-766
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 54
               

               Conread position:
               479-756
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               16, 42
               

               Conread position:
               481-719
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               9, 58
               

               Conread position:
               483-766
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 54
               

               Conread position:
               488-766
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               216
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               15, 52
               

               Conread position:
               492-763
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               83, 25
               

               Conread position:
               496-712
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               8, 42
               

               Conread position:
               500-769
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 25
               

               Conread position:
               511-707
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               522-769
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               70, 132
               

               Conread position:
               530-769
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               185
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               6, 48
               

               Conread position:
               535-740
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               66, 40
               

               Conread position:
               536-756
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               60, 35
               

               Conread position:
               536-768
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               65, 43
               

               Conread position:
               537-742
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               56, 29
               

               Conread position:
               539-756
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               53, 64
               

               Conread position:
               540-758
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               52, 198
               

               Conread position:
               541-766
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               177
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               51, 141
               

               Conread position:
               547-773
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               25, 60
               

               Conread position:
               564-764
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               28, 99
               

               Conread position:
               568-766
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               24, 176
               

               Conread position:
               572-766
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               19, 31
               

               Conread position:
               575-743
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               16, 165
               

               Conread position:
               577-766
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               15, 59
               

               Conread position:
               606-766
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               104, 112
               

               Conread position:
               609-766
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               11, 127
               

               Conread position:
               609-766
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               11, 41
               

               Conread position:
               610-758
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               21, 44
               

               Conread position:
               610-766
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               621-766
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               626-773
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               649-766
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               84, 0
               
Show alignments to all cow chromosomes.