Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8022E11.3
        

               Conread position:
               155-418
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 82
               

               Conread position:
               155-523
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 74
               

               Conread position:
               155-535
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 83
               

               Conread position:
               157-390
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               52, 73
               

               Conread position:
               158-331
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               94, 39
               

               Conread position:
               158-428
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               55, 78
               

               Conread position:
               158-463
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               51, 43
               

               Conread position:
               158-622
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 41
               

               Conread position:
               158-641
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 76
               

               Conread position:
               158-663
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               158-698
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 154
               

               Conread position:
               158-698
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 25
               

               Conread position:
               159-757
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 77
               

               Conread position:
               159-768
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 77
               

               Conread position:
               159-774
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 77
               

               Conread position:
               162-381
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               49, 75
               

               Conread position:
               169-353
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               40, 58
               

               Conread position:
               198-767
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 41
               

               Conread position:
               200-384
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               12, 36
               

               Conread position:
               209-758
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 26
               

               Conread position:
               220-765
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 15
               

               Conread position:
               273-406
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-639
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               264
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               148, 13
               

               Conread position:
               288-532
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               99, 49
               

               Conread position:
               291-590
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               237
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               88, 230
               

               Conread position:
               292-765
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 48
               

               Conread position:
               315-580
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 222
               

               Conread position:
               333-711
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 105
               

               Conread position:
               393-677
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               214
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               415-754
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 13
               

               Conread position:
               418-765
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 11
               

               Conread position:
               418-767
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               424-725
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               19, 69
               

               Conread position:
               430-766
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               250
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               12, 111
               

               Conread position:
               460-764
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 58
               

               Conread position:
               460-765
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               41, 78
               

               Conread position:
               461-730
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               40, 109
               

               Conread position:
               461-746
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               130, 38
               

               Conread position:
               471-640
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               34, 73
               

               Conread position:
               477-766
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               222
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               26, 58
               

               Conread position:
               479-765
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               20, 59
               

               Conread position:
               491-756
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               12, 122
               

               Conread position:
               495-725
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               119, 7
               

               Conread position:
               500-766
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               112, 37
               

               Conread position:
               513-766
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               79, 24
               

               Conread position:
               535-727
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               57, 172
               

               Conread position:
               536-769
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               185
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               54, 33
               

               Conread position:
               542-771
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               51, 112
               

               Conread position:
               551-766
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               39, 59
               

               Conread position:
               551-766
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               551-768
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               9, 82
               

               Conread position:
               563-770
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               22, 180
               

               Conread position:
               568-758
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               12, 89
               

               Conread position:
               568-773
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               26, 63
               

               Conread position:
               605-755
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               76, 131
               

               Conread position:
               621-766
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               622-767
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               86, 80
               

               Conread position:
               626-765
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               84, 60
               
Show alignments to all cow chromosomes.