Cow genome map
Conread name: | Ss1.1-Pig3-SRG8022E11.3 |
Conread position: | 157-767 |
Cow position: | chr21:23399007-23399620 (view UCSC Genome Browser custom track) |
Alignm length: | 639 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 14 |
Conread position: | 158-311 |
Cow position: | chr21:37282354-37282506 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 124 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 94, 53 |
Conread position: | 158-378 |
Cow position: | chr21:30897468-30897684 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 157 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 79, 90 |
Conread position: | 158-381 |
Cow position: | chr21:33292767-33292993 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 174 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 55, 78 |
Conread position: | 158-418 |
Cow position: | chr21:24944844-24944576 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 201 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 20, 79 |
Conread position: | 158-505 |
Cow position: | chr21:6280345-6280696 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 240 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 65, 17 |
Conread position: | 158-548 |
Cow position: | chr21:8273512-8273092 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 294 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 54, 142 |
Conread position: | 158-754 |
Cow position: | chr21:16166588-16166004 (view UCSC Genome Browser custom track) |
Alignm length: | 614 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 19 |
Conread position: | 158-758 |
Cow position: | chr21:1991339-1991929 (view UCSC Genome Browser custom track) |
Alignm length: | 611 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 43 |
Conread position: | 158-758 |
Cow position: | chr21:24972553-24971976 (view UCSC Genome Browser custom track) |
Alignm length: | 612 |
Alignm identity: | 437 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 74 |
Conread position: | 158-766 |
Cow position: | chr21:15543896-15543296 (view UCSC Genome Browser custom track) |
Alignm length: | 626 |
Alignm identity: | 467 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 17 |
Conread position: | 159-378 |
Cow position: | chr21:9040921-9041140 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 154 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 52, 62 |
Conread position: | 159-600 |
Cow position: | chr21:5597205-5597632 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 310 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 54, 92 |
Conread position: | 159-642 |
Cow position: | chr21:25018920-25019399 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 12 |
Conread position: | 159-683 |
Cow position: | chr21:37355730-37356235 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 97 |
Conread position: | 168-329 |
Cow position: | chr21:37941623-37941460 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 125 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 44, 112 |
Conread position: | 173-766 |
Cow position: | chr21:45447656-45448242 (view UCSC Genome Browser custom track) |
Alignm length: | 604 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 63 |
Conread position: | 175-321 |
Cow position: | chr21:12077419-12077566 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 110 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 35, 61 |
Conread position: | 192-534 |
Cow position: | chr21:39765922-39766267 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 24 |
Conread position: | 192-771 |
Cow position: | chr21:26632357-26631797 (view UCSC Genome Browser custom track) |
Alignm length: | 596 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 215, 43 |
Conread position: | 254-683 |
Cow position: | chr21:16678958-16679363 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 305 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 35, 10 |
Conread position: | 310-629 |
Cow position: | chr21:7724743-7724443 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 227 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 168, 18 |
Conread position: | 328-766 |
Cow position: | chr21:39075270-39074824 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 180 |
Conread position: | 333-644 |
Cow position: | chr21:37941271-37940964 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 240 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 46, 107 |
Conread position: | 348-756 |
Cow position: | chr21:22941621-22942024 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 86 |
Conread position: | 351-767 |
Cow position: | chr21:45962639-45963060 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 91 |
Conread position: | 362-766 |
Cow position: | chr21:29943160-29943564 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 274 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 36, 130 |
Conread position: | 379-583 |
Cow position: | chr21:27089849-27089645 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 154 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 48, 15 |
Conread position: | 383-764 |
Cow position: | chr21:26742228-26741868 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 110 |
Conread position: | 404-612 |
Cow position: | chr21:30793973-30793761 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 154 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 18, 42 |
Conread position: | 431-754 |
Cow position: | chr21:9976498-9976830 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 247 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 112, 8 |
Conread position: | 447-757 |
Cow position: | chr21:23286298-23285996 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 45 |
Conread position: | 462-728 |
Cow position: | chr21:26579660-26579925 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 195 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 42, 25 |
Conread position: | 463-721 |
Cow position: | chr21:29644001-29643734 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 197 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 40, 69 |
Conread position: | 466-690 |
Cow position: | chr21:5994616-5994396 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 168 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 37, 28 |
Conread position: | 474-765 |
Cow position: | chr21:38021267-38021550 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 210 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 147, 47 |
Conread position: | 476-779 |
Cow position: | chr21:12079591-12079886 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 227 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 131, 19 |
Conread position: | 477-780 |
Cow position: | chr21:17672007-17671705 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 34 |
Conread position: | 500-764 |
Cow position: | chr21:37282919-37283171 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 211 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 92, 15 |
Conread position: | 536-765 |
Cow position: | chr21:5486980-5487191 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 166 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 536-766 |
Cow position: | chr21:30567538-30567312 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 177 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 55, 38 |
Conread position: | 536-766 |
Cow position: | chr21:42396409-42396641 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 176 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 54, 64 |
Conread position: | 540-736 |
Cow position: | chr21:33975069-33975275 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 154 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 60, 33 |
Conread position: | 551-766 |
Cow position: | chr21:6282368-6282579 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 164 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 62, 106 |
Conread position: | 558-766 |
Cow position: | chr21:27678461-27678673 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 168 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 33, 16 |
Conread position: | 609-778 |
Cow position: | chr21:27089450-27089284 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 124 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 610-766 |
Cow position: | chr21:37170271-37170423 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 125 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 105, 82 |
Conread position: | 611-753 |
Cow position: | chr21:28650851-28650990 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 117 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 617-757 |
Cow position: | chr21:39527396-39527533 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 113 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 108, 74 |
Conread position: | 626-766 |
Cow position: | chr21:25019518-25019657 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 110 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 631-754 |
Cow position: | chr21:5588907-5588786 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 101 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 65, 0 |
Show alignments to all cow chromosomes.