Cow genome map

Conread name: Ss1.1-Pig3-SRG8022E11.3

Conread position: 157-767
Cow position: chr21:23399007-23399620 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 14

Conread position: 158-311
Cow position: chr21:37282354-37282506 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 94, 53

Conread position: 158-378
Cow position: chr21:30897468-30897684 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 79, 90

Conread position: 158-381
Cow position: chr21:33292767-33292993 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 55, 78

Conread position: 158-418
Cow position: chr21:24944844-24944576 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 20, 79

Conread position: 158-505
Cow position: chr21:6280345-6280696 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 240
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 65, 17

Conread position: 158-548
Cow position: chr21:8273512-8273092 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 294
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 54, 142

Conread position: 158-754
Cow position: chr21:16166588-16166004 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 19

Conread position: 158-758
Cow position: chr21:1991339-1991929 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 43

Conread position: 158-758
Cow position: chr21:24972553-24971976 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 74

Conread position: 158-766
Cow position: chr21:15543896-15543296 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 17

Conread position: 159-378
Cow position: chr21:9040921-9041140 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 62

Conread position: 159-600
Cow position: chr21:5597205-5597632 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 310
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 54, 92

Conread position: 159-642
Cow position: chr21:25018920-25019399 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 12

Conread position: 159-683
Cow position: chr21:37355730-37356235 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 97

Conread position: 168-329
Cow position: chr21:37941623-37941460 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 112

Conread position: 173-766
Cow position: chr21:45447656-45448242 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 175-321
Cow position: chr21:12077419-12077566 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 61

Conread position: 192-534
Cow position: chr21:39765922-39766267 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 24

Conread position: 192-771
Cow position: chr21:26632357-26631797 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 43

Conread position: 254-683
Cow position: chr21:16678958-16679363 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 305
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 35, 10

Conread position: 310-629
Cow position: chr21:7724743-7724443 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 227
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 168, 18

Conread position: 328-766
Cow position: chr21:39075270-39074824 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 180

Conread position: 333-644
Cow position: chr21:37941271-37940964 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 240
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 46, 107

Conread position: 348-756
Cow position: chr21:22941621-22942024 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 86

Conread position: 351-767
Cow position: chr21:45962639-45963060 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 91

Conread position: 362-766
Cow position: chr21:29943160-29943564 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 274
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 36, 130

Conread position: 379-583
Cow position: chr21:27089849-27089645 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 48, 15

Conread position: 383-764
Cow position: chr21:26742228-26741868 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 110

Conread position: 404-612
Cow position: chr21:30793973-30793761 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 18, 42

Conread position: 431-754
Cow position: chr21:9976498-9976830 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 247
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 112, 8

Conread position: 447-757
Cow position: chr21:23286298-23285996 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 45

Conread position: 462-728
Cow position: chr21:26579660-26579925 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 25

Conread position: 463-721
Cow position: chr21:29644001-29643734 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 40, 69

Conread position: 466-690
Cow position: chr21:5994616-5994396 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 37, 28

Conread position: 474-765
Cow position: chr21:38021267-38021550 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 147, 47

Conread position: 476-779
Cow position: chr21:12079591-12079886 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 131, 19

Conread position: 477-780
Cow position: chr21:17672007-17671705 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 34

Conread position: 500-764
Cow position: chr21:37282919-37283171 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 211
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 92, 15

Conread position: 536-765
Cow position: chr21:5486980-5487191 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 536-766
Cow position: chr21:30567538-30567312 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 55, 38

Conread position: 536-766
Cow position: chr21:42396409-42396641 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 54, 64

Conread position: 540-736
Cow position: chr21:33975069-33975275 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 60, 33

Conread position: 551-766
Cow position: chr21:6282368-6282579 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 62, 106

Conread position: 558-766
Cow position: chr21:27678461-27678673 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 33, 16

Conread position: 609-778
Cow position: chr21:27089450-27089284 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 129, 0

Conread position: 610-766
Cow position: chr21:37170271-37170423 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 105, 82

Conread position: 611-753
Cow position: chr21:28650851-28650990 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 98, 0

Conread position: 617-757
Cow position: chr21:39527396-39527533 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 108, 74

Conread position: 626-766
Cow position: chr21:25019518-25019657 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 107, 0

Conread position: 631-754
Cow position: chr21:5588907-5588786 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 65, 0

Show alignments to all cow chromosomes.