Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8022E11.3
        

               Conread position:
               157-767
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               158-311
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               94, 53
               

               Conread position:
               158-378
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               79, 90
               

               Conread position:
               158-381
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               55, 78
               

               Conread position:
               158-418
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               20, 79
               

               Conread position:
               158-505
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               240
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               65, 17
               

               Conread position:
               158-548
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               294
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               54, 142
               

               Conread position:
               158-754
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               158-758
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 43
               

               Conread position:
               158-758
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 74
               

               Conread position:
               158-766
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 17
               

               Conread position:
               159-378
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               52, 62
               

               Conread position:
               159-600
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               310
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               54, 92
               

               Conread position:
               159-642
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 12
               

               Conread position:
               159-683
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 97
               

               Conread position:
               168-329
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               44, 112
               

               Conread position:
               173-766
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 63
               

               Conread position:
               175-321
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               35, 61
               

               Conread position:
               192-534
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 24
               

               Conread position:
               192-771
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 43
               

               Conread position:
               254-683
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               305
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               35, 10
               

               Conread position:
               310-629
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               168, 18
               

               Conread position:
               328-766
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 180
               

               Conread position:
               333-644
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               46, 107
               

               Conread position:
               348-756
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 86
               

               Conread position:
               351-767
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 91
               

               Conread position:
               362-766
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               36, 130
               

               Conread position:
               379-583
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               48, 15
               

               Conread position:
               383-764
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 110
               

               Conread position:
               404-612
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               18, 42
               

               Conread position:
               431-754
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               112, 8
               

               Conread position:
               447-757
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 45
               

               Conread position:
               462-728
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               42, 25
               

               Conread position:
               463-721
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               40, 69
               

               Conread position:
               466-690
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               37, 28
               

               Conread position:
               474-765
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               147, 47
               

               Conread position:
               476-779
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               227
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               131, 19
               

               Conread position:
               477-780
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 34
               

               Conread position:
               500-764
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               92, 15
               

               Conread position:
               536-765
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               536-766
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               55, 38
               

               Conread position:
               536-766
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               54, 64
               

               Conread position:
               540-736
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               60, 33
               

               Conread position:
               551-766
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               62, 106
               

               Conread position:
               558-766
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               33, 16
               

               Conread position:
               609-778
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               610-766
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               105, 82
               

               Conread position:
               611-753
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               617-757
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               108, 74
               

               Conread position:
               626-766
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               631-754
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               65, 0
               
Show alignments to all cow chromosomes.