Cow genome map

Conread name: Ss1.1-Pig3-SRG8022E11.3

Conread position: 155-750
Cow position:
Alignm length: 615
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 55

Conread position: 157-739
Cow position:
Alignm length: 604
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 79

Conread position: 158-379
Cow position:
Alignm length: 226
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 34

Conread position: 158-402
Cow position:
Alignm length: 248
Alignm identity: 175
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 56, 79

Conread position: 158-507
Cow position:
Alignm length: 353
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 78

Conread position: 158-530
Cow position:
Alignm length: 385
Alignm identity: 258
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 40, 100

Conread position: 158-622
Cow position:
Alignm length: 486
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 19

Conread position: 158-764
Cow position:
Alignm length: 626
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 79

Conread position: 158-766
Cow position:
Alignm length: 631
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 79

Conread position: 158-779
Cow position:
Alignm length: 647
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 76

Conread position: 159-392
Cow position:
Alignm length: 237
Alignm identity: 168
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 54, 132

Conread position: 159-416
Cow position:
Alignm length: 265
Alignm identity: 193
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 51, 71

Conread position: 160-752
Cow position:
Alignm length: 602
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 72

Conread position: 164-765
Cow position:
Alignm length: 616
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 57

Conread position: 166-311
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 38

Conread position: 166-494
Cow position:
Alignm length: 337
Alignm identity: 234
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 45, 62

Conread position: 168-755
Cow position:
Alignm length: 611
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 68

Conread position: 171-378
Cow position:
Alignm length: 209
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 66

Conread position: 197-573
Cow position:
Alignm length: 394
Alignm identity: 273
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 15, 105

Conread position: 216-683
Cow position:
Alignm length: 493
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 20

Conread position: 229-766
Cow position:
Alignm length: 549
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 56

Conread position: 255-766
Cow position:
Alignm length: 521
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 179

Conread position: 278-766
Cow position:
Alignm length: 496
Alignm identity: 334
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 115, 13

Conread position: 282-548
Cow position:
Alignm length: 271
Alignm identity: 196
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 157, 70

Conread position: 291-510
Cow position:
Alignm length: 226
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 129, 92

Conread position: 298-723
Cow position:
Alignm length: 447
Alignm identity: 299
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 95, 80

Conread position: 301-485
Cow position:
Alignm length: 191
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 314-758
Cow position:
Alignm length: 456
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 126

Conread position: 333-772
Cow position:
Alignm length: 468
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 207

Conread position: 334-632
Cow position:
Alignm length: 308
Alignm identity: 223
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 100, 48

Conread position: 352-622
Cow position:
Alignm length: 285
Alignm identity: 199
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 8, 14

Conread position: 386-714
Cow position:
Alignm length: 338
Alignm identity: 225
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 64, 104

Conread position: 388-763
Cow position:
Alignm length: 393
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 10

Conread position: 398-724
Cow position:
Alignm length: 335
Alignm identity: 222
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 47

Conread position: 418-766
Cow position:
Alignm length: 360
Alignm identity: 250
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 87, 120

Conread position: 433-709
Cow position:
Alignm length: 284
Alignm identity: 211
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 157, 53

Conread position: 452-766
Cow position:
Alignm length: 323
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 40

Conread position: 460-689
Cow position:
Alignm length: 236
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 131, 68

Conread position: 473-706
Cow position:
Alignm length: 242
Alignm identity: 186
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 26, 65

Conread position: 474-767
Cow position:
Alignm length: 305
Alignm identity: 209
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 109, 51

Conread position: 481-672
Cow position:
Alignm length: 196
Alignm identity: 149
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 24, 57

Conread position: 489-766
Cow position:
Alignm length: 296
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 29

Conread position: 505-767
Cow position:
Alignm length: 267
Alignm identity: 191
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 40, 35

Conread position: 507-758
Cow position:
Alignm length: 257
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 31

Conread position: 510-771
Cow position:
Alignm length: 276
Alignm identity: 197
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 81, 21

Conread position: 522-767
Cow position:
Alignm length: 249
Alignm identity: 169
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 99

Conread position: 536-766
Cow position:
Alignm length: 231
Alignm identity: 156
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 56, 0

Conread position: 540-761
Cow position:
Alignm length: 234
Alignm identity: 163
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 76

Conread position: 546-766
Cow position:
Alignm length: 240
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 50, 46

Conread position: 546-766
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 49, 12

Conread position: 547-767
Cow position:
Alignm length: 237
Alignm identity: 168
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 45, 166

Conread position: 547-769
Cow position:
Alignm length: 233
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 27

Conread position: 548-780
Cow position:
Alignm length: 240
Alignm identity: 179
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 65, 189

Conread position: 605-766
Cow position:
Alignm length: 162
Alignm identity: 127
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 127, 0

Conread position: 610-766
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 653-766
Cow position:
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 107, 8

Show alignments to all cow chromosomes.