Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8022E11.3
        

               Conread position:
               158-389
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               223, 17
               

               Conread position:
               158-407
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               54, 79
               

               Conread position:
               158-418
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               53, 173
               

               Conread position:
               158-730
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 80
               

               Conread position:
               159-379
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               52, 77
               

               Conread position:
               160-418
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 131
               

               Conread position:
               161-743
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               163-398
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               50, 38
               

               Conread position:
               166-766
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 43
               

               Conread position:
               169-379
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               44, 67
               

               Conread position:
               170-723
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 67
               

               Conread position:
               174-418
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               72, 55
               

               Conread position:
               176-428
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               275-711
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 66
               

               Conread position:
               310-673
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               110, 161
               

               Conread position:
               326-693
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 218
               

               Conread position:
               333-767
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 208
               

               Conread position:
               334-766
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 31
               

               Conread position:
               339-534
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               164, 28
               

               Conread position:
               341-766
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 127
               

               Conread position:
               358-765
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 185
               

               Conread position:
               377-754
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 125
               

               Conread position:
               381-771
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 30
               

               Conread position:
               388-756
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               448-769
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 111
               

               Conread position:
               451-767
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 87
               

               Conread position:
               454-766
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 63
               

               Conread position:
               460-765
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               43, 71
               

               Conread position:
               461-690
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               187
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               42, 55
               

               Conread position:
               462-693
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               75, 42
               

               Conread position:
               498-766
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               500-766
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               204
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               71, 27
               

               Conread position:
               530-765
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               62, 43
               

               Conread position:
               531-754
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               65, 61
               

               Conread position:
               536-765
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               55, 122
               

               Conread position:
               547-761
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               45, 192
               

               Conread position:
               556-757
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               51, 189
               

               Conread position:
               556-766
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               36, 117
               

               Conread position:
               559-765
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               33, 94
               

               Conread position:
               565-766
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               165
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               27, 82
               

               Conread position:
               608-766
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               98, 11
               

               Conread position:
               635-768
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 41
               
Show alignments to all cow chromosomes.