Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8022E11.3 |
| Conread position: | 155-758 |
| Cow position: | chr26:15632488-15633082 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 67 |
| Conread position: | 157-378 |
| Cow position: | chr26:14364079-14363858 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 158-379 |
| Cow position: | chr26:34032104-34032321 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 53, 27 |
| Conread position: | 158-418 |
| Cow position: | chr26:22161856-22161596 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 158-502 |
| Cow position: | chr26:15558511-15558846 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 244 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 55, 72 |
| Conread position: | 158-765 |
| Cow position: | chr26:21013352-21013971 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 159-443 |
| Cow position: | chr26:12069624-12069902 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 211 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 159-766 |
| Cow position: | chr26:28421756-28421145 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 75 |
| Conread position: | 159-766 |
| Cow position: | chr26:30603097-30602498 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 77 |
| Conread position: | 166-566 |
| Cow position: | chr26:4560234-4559844 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 175-466 |
| Cow position: | chr26:12871412-12871715 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 35, 77 |
| Conread position: | 191-757 |
| Cow position: | chr26:14509810-14509246 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 44 |
| Conread position: | 192-757 |
| Cow position: | chr26:16214302-16214868 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 45 |
| Conread position: | 209-390 |
| Cow position: | chr26:15938895-15939075 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 258-774 |
| Cow position: | chr26:4663983-4663469 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 59 |
| Conread position: | 281-418 |
| Cow position: | chr26:34089809-34089942 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 290-515 |
| Cow position: | chr26:19492899-19493128 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 98, 177 |
| Conread position: | 365-671 |
| Cow position: | chr26:33214610-33214304 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 58, 86 |
| Conread position: | 422-757 |
| Cow position: | chr26:14081658-14081975 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 240 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 81, 17 |
| Conread position: | 422-766 |
| Cow position: | chr26:5718078-5717735 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 254 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 72, 110 |
| Conread position: | 444-769 |
| Cow position: | chr26:34037947-34037621 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 94 |
| Conread position: | 460-727 |
| Cow position: | chr26:6828290-6828557 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 460-766 |
| Cow position: | chr26:28864713-28864413 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 43, 54 |
| Conread position: | 477-779 |
| Cow position: | chr26:12872049-12872338 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 22, 54 |
| Conread position: | 479-766 |
| Cow position: | chr26:5196826-5197109 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 26 |
| Conread position: | 492-766 |
| Cow position: | chr26:19958177-19958454 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 46 |
| Conread position: | 492-766 |
| Cow position: | chr26:22161192-22160931 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 536-769 |
| Cow position: | chr26:4559839-4559613 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 54, 73 |
| Conread position: | 539-775 |
| Cow position: | chr26:2362420-2362650 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 62, 5 |
| Conread position: | 540-755 |
| Cow position: | chr26:14363714-14363499 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 52, 40 |
| Conread position: | 542-766 |
| Cow position: | chr26:30011399-30011180 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 50, 61 |
| Conread position: | 546-766 |
| Cow position: | chr26:1069057-1068831 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 28, 136 |
| Conread position: | 556-764 |
| Cow position: | chr26:19493133-19493344 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 170 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 36, 92 |
| Conread position: | 571-756 |
| Cow position: | chr26:5794109-5794296 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 48, 165 |
| Conread position: | 601-757 |
| Cow position: | chr26:4798360-4798514 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 610-756 |
| Cow position: | chr26:13346119-13346261 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
Show alignments to all cow chromosomes.