Cow genome map
Conread name: | Ss1.1-Pig3-SRG8022E11.3 |
Conread position: | 155-338 |
Cow position: | chr27:25676199-25676016 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 138 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 5, 13 |
Conread position: | 158-350 |
Cow position: | chr27:9184592-9184395 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 149 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 45, 13 |
Conread position: | 158-375 |
Cow position: | chr27:5530719-5530501 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 168 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 56, 79 |
Conread position: | 158-379 |
Cow position: | chr27:1142070-1142290 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 149 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 56, 76 |
Conread position: | 158-379 |
Cow position: | chr27:4007289-4007511 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 147 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 53, 78 |
Conread position: | 158-418 |
Cow position: | chr27:31237988-31238262 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 191 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 51, 71 |
Conread position: | 158-705 |
Cow position: | chr27:11935652-11935110 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 233, 54 |
Conread position: | 158-766 |
Cow position: | chr27:3934717-3935351 (view UCSC Genome Browser custom track) |
Alignm length: | 642 |
Alignm identity: | 450 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 94 |
Conread position: | 158-769 |
Cow position: | chr27:9261799-9261174 (view UCSC Genome Browser custom track) |
Alignm length: | 642 |
Alignm identity: | 478 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 79 |
Conread position: | 160-767 |
Cow position: | chr27:30888932-30889530 (view UCSC Genome Browser custom track) |
Alignm length: | 622 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 49 |
Conread position: | 251-418 |
Cow position: | chr27:30738371-30738534 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 123 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 144, 0 |
Conread position: | 255-766 |
Cow position: | chr27:26091533-26092052 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 99 |
Conread position: | 264-391 |
Cow position: | chr27:28105297-28105424 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 96 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 294-766 |
Cow position: | chr27:13860777-13861212 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 68 |
Conread position: | 360-766 |
Cow position: | chr27:17564800-17564390 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 38 |
Conread position: | 378-667 |
Cow position: | chr27:11755728-11756010 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 206 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 42, 15 |
Conread position: | 386-766 |
Cow position: | chr27:23074037-23073643 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 273 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 33, 115 |
Conread position: | 387-757 |
Cow position: | chr27:4962404-4962759 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 261 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 33, 120 |
Conread position: | 418-671 |
Cow position: | chr27:6534354-6534604 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 94 |
Conread position: | 422-756 |
Cow position: | chr27:2246694-2246372 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 118 |
Conread position: | 425-758 |
Cow position: | chr27:18589439-18589115 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 18 |
Conread position: | 444-766 |
Cow position: | chr27:11021436-11021128 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 43 |
Conread position: | 447-753 |
Cow position: | chr27:4449649-4449938 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 221 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 145, 40 |
Conread position: | 450-754 |
Cow position: | chr27:16100024-16100317 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 207 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 11, 68 |
Conread position: | 457-752 |
Cow position: | chr27:1540613-1540881 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 217 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 49, 77 |
Conread position: | 460-768 |
Cow position: | chr27:18057167-18056860 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 81 |
Conread position: | 473-744 |
Cow position: | chr27:15211414-15211136 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 65 |
Conread position: | 500-766 |
Cow position: | chr27:7860140-7860405 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 209 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 92, 18 |
Conread position: | 536-719 |
Cow position: | chr27:12547773-12547963 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 148 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 536-766 |
Cow position: | chr27:18179082-18179316 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 183 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 54, 118 |
Conread position: | 536-772 |
Cow position: | chr27:28292964-28292732 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 162 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 54, 71 |
Conread position: | 541-766 |
Cow position: | chr27:4921868-4922096 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 179 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 51, 26 |
Conread position: | 542-755 |
Cow position: | chr27:5531311-5531514 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 159 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 49, 24 |
Conread position: | 544-761 |
Cow position: | chr27:31376184-31375969 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 165 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 46, 122 |
Conread position: | 545-767 |
Cow position: | chr27:31524120-31523897 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 172 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 46, 120 |
Conread position: | 546-766 |
Cow position: | chr27:18573478-18573254 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 171 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 46, 20 |
Conread position: | 548-773 |
Cow position: | chr27:18546497-18546280 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 581-764 |
Cow position: | chr27:12000117-12000307 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 145 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 11, 159 |
Conread position: | 610-766 |
Cow position: | chr27:23966302-23966146 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 114 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 77, 124 |
Conread position: | 611-763 |
Cow position: | chr27:7183796-7183947 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 117 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 618-767 |
Cow position: | chr27:14881378-14881526 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 110 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 75, 116 |
Conread position: | 652-766 |
Cow position: | chr27:18780190-18780077 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 92 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 81, 0 |
Show alignments to all cow chromosomes.