Cow genome map

Conread name: Ss1.1-Pig3-SRG8022E11.3

Conread position: 155-338
Cow position: chr27:25676199-25676016 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 13

Conread position: 158-350
Cow position: chr27:9184592-9184395 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 13

Conread position: 158-375
Cow position: chr27:5530719-5530501 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 56, 79

Conread position: 158-379
Cow position: chr27:1142070-1142290 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 76

Conread position: 158-379
Cow position: chr27:4007289-4007511 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 78

Conread position: 158-418
Cow position: chr27:31237988-31238262 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 71

Conread position: 158-705
Cow position: chr27:11935652-11935110 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 54

Conread position: 158-766
Cow position: chr27:3934717-3935351 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 94

Conread position: 158-769
Cow position: chr27:9261799-9261174 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 79

Conread position: 160-767
Cow position: chr27:30888932-30889530 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 49

Conread position: 251-418
Cow position: chr27:30738371-30738534 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 144, 0

Conread position: 255-766
Cow position: chr27:26091533-26092052 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 99

Conread position: 264-391
Cow position: chr27:28105297-28105424 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 294-766
Cow position: chr27:13860777-13861212 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 68

Conread position: 360-766
Cow position: chr27:17564800-17564390 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 38

Conread position: 378-667
Cow position: chr27:11755728-11756010 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 42, 15

Conread position: 386-766
Cow position: chr27:23074037-23073643 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 273
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 33, 115

Conread position: 387-757
Cow position: chr27:4962404-4962759 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 261
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 33, 120

Conread position: 418-671
Cow position: chr27:6534354-6534604 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 94

Conread position: 422-756
Cow position: chr27:2246694-2246372 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 118

Conread position: 425-758
Cow position: chr27:18589439-18589115 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 18

Conread position: 444-766
Cow position: chr27:11021436-11021128 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 43

Conread position: 447-753
Cow position: chr27:4449649-4449938 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 221
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 145, 40

Conread position: 450-754
Cow position: chr27:16100024-16100317 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 207
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 11, 68

Conread position: 457-752
Cow position: chr27:1540613-1540881 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 49, 77

Conread position: 460-768
Cow position: chr27:18057167-18056860 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 81

Conread position: 473-744
Cow position: chr27:15211414-15211136 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 65

Conread position: 500-766
Cow position: chr27:7860140-7860405 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 92, 18

Conread position: 536-719
Cow position: chr27:12547773-12547963 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 56, 0

Conread position: 536-766
Cow position: chr27:18179082-18179316 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 183
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 54, 118

Conread position: 536-772
Cow position: chr27:28292964-28292732 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 54, 71

Conread position: 541-766
Cow position: chr27:4921868-4922096 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 51, 26

Conread position: 542-755
Cow position: chr27:5531311-5531514 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 49, 24

Conread position: 544-761
Cow position: chr27:31376184-31375969 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 46, 122

Conread position: 545-767
Cow position: chr27:31524120-31523897 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 46, 120

Conread position: 546-766
Cow position: chr27:18573478-18573254 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 46, 20

Conread position: 548-773
Cow position: chr27:18546497-18546280 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 581-764
Cow position: chr27:12000117-12000307 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 159

Conread position: 610-766
Cow position: chr27:23966302-23966146 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 77, 124

Conread position: 611-763
Cow position: chr27:7183796-7183947 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 618-767
Cow position: chr27:14881378-14881526 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 75, 116

Conread position: 652-766
Cow position: chr27:18780190-18780077 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 81, 0

Show alignments to all cow chromosomes.