Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8022E11.3
        

               Conread position:
               154-767
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 34
               

               Conread position:
               157-379
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               55, 33
               

               Conread position:
               157-401
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               48, 30
               

               Conread position:
               157-560
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 77
               

               Conread position:
               157-732
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 81
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               53, 76
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               55, 78
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               55, 78
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               53, 78
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               55, 18
               

               Conread position:
               158-410
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               56, 228
               

               Conread position:
               158-535
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               54, 40
               

               Conread position:
               158-542
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               268
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               52, 32
               

               Conread position:
               158-589
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 62
               

               Conread position:
               158-641
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 72
               

               Conread position:
               158-758
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 69
               

               Conread position:
               158-758
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               158-766
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 76
               

               Conread position:
               158-766
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 64
               

               Conread position:
               158-766
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 24
               

               Conread position:
               159-416
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 77
               

               Conread position:
               159-485
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 74
               

               Conread position:
               159-485
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               160-381
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               52, 27
               

               Conread position:
               160-767
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 77
               

               Conread position:
               163-353
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               50, 73
               

               Conread position:
               166-329
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 21
               

               Conread position:
               176-563
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               177-376
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               33, 59
               

               Conread position:
               209-766
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 26
               

               Conread position:
               215-766
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 20
               

               Conread position:
               235-418
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 106
               

               Conread position:
               243-685
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               311
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               177, 11
               

               Conread position:
               276-757
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 89
               

               Conread position:
               290-769
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 94
               

               Conread position:
               308-616
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               44, 79
               

               Conread position:
               346-753
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 202
               

               Conread position:
               350-693
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               36, 192
               

               Conread position:
               360-758
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 138
               

               Conread position:
               363-758
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 20
               

               Conread position:
               370-753
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               373-703
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 10
               

               Conread position:
               377-765
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               47, 132
               

               Conread position:
               387-768
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               262
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               61, 146
               

               Conread position:
               387-769
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 51
               

               Conread position:
               393-766
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 122
               

               Conread position:
               395-765
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 98
               

               Conread position:
               396-766
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 8
               

               Conread position:
               405-750
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               72, 92
               

               Conread position:
               408-766
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               70, 9
               

               Conread position:
               418-754
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               85, 114
               

               Conread position:
               425-764
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 20
               

               Conread position:
               427-766
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 52
               

               Conread position:
               431-695
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               68, 61
               

               Conread position:
               434-755
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               69, 21
               

               Conread position:
               440-690
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 96
               

               Conread position:
               449-758
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               291, 68
               

               Conread position:
               451-766
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 86
               

               Conread position:
               452-765
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               7, 87
               

               Conread position:
               460-766
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 28
               

               Conread position:
               460-766
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               42, 78
               

               Conread position:
               461-757
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 79
               

               Conread position:
               463-761
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               127, 53
               

               Conread position:
               465-771
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 74
               

               Conread position:
               466-766
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 29
               

               Conread position:
               473-714
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               116, 29
               

               Conread position:
               474-766
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               29, 57
               

               Conread position:
               474-766
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               30, 57
               

               Conread position:
               478-689
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               25, 59
               

               Conread position:
               479-766
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               24, 58
               

               Conread position:
               495-758
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               8, 43
               

               Conread position:
               499-696
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               91, 38
               

               Conread position:
               500-766
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               92, 24
               

               Conread position:
               501-714
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               171
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               90, 36
               

               Conread position:
               504-767
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 33
               

               Conread position:
               505-685
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               91, 20
               

               Conread position:
               506-766
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 31
               

               Conread position:
               509-766
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               8, 29
               

               Conread position:
               522-765
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               70, 33
               

               Conread position:
               523-764
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 13
               

               Conread position:
               535-766
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 200
               

               Conread position:
               537-749
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               53, 6
               

               Conread position:
               538-758
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               10, 32
               

               Conread position:
               539-764
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               53, 200
               

               Conread position:
               550-758
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               42, 19
               

               Conread position:
               552-758
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               39, 22
               

               Conread position:
               555-701
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               558-757
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               54, 42
               

               Conread position:
               561-725
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 127
               

               Conread position:
               564-766
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               17, 170
               

               Conread position:
               571-748
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               19, 11
               

               Conread position:
               573-768
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               34, 11
               

               Conread position:
               608-756
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               16, 127
               

               Conread position:
               608-757
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               608-766
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               610-766
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               69, 129
               

               Conread position:
               611-766
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               634-765
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               126, 99
               
Show alignments to all cow chromosomes.