Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8022E11.3
        

               Conread position:
               155-501
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 82
               

               Conread position:
               157-428
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               157-535
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 72
               

               Conread position:
               157-766
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 56
               

               Conread position:
               158-312
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 72
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               52, 76
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               52, 45
               

               Conread position:
               158-463
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               158-667
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 79
               

               Conread position:
               158-756
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 51
               

               Conread position:
               158-766
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 47
               

               Conread position:
               159-340
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               50, 71
               

               Conread position:
               159-411
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 78
               

               Conread position:
               159-419
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               95, 54
               

               Conread position:
               159-510
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 74
               

               Conread position:
               159-528
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 60
               

               Conread position:
               159-732
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 77
               

               Conread position:
               159-767
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 77
               

               Conread position:
               159-769
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 77
               

               Conread position:
               160-378
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               53, 43
               

               Conread position:
               160-766
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 33
               

               Conread position:
               161-417
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               56, 11
               

               Conread position:
               161-535
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 52
               

               Conread position:
               161-754
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 21
               

               Conread position:
               163-378
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               47, 73
               

               Conread position:
               166-385
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               45, 39
               

               Conread position:
               179-335
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               34, 57
               

               Conread position:
               179-686
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 57
               

               Conread position:
               187-396
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               26, 49
               

               Conread position:
               191-371
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               66, 44
               

               Conread position:
               200-626
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 35
               

               Conread position:
               209-528
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               45, 26
               

               Conread position:
               212-765
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 23
               

               Conread position:
               240-766
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 6
               

               Conread position:
               256-535
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               262-761
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               338
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               72, 42
               

               Conread position:
               275-495
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               119, 164
               

               Conread position:
               276-620
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               109, 47
               

               Conread position:
               276-696
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 132
               

               Conread position:
               330-766
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 92
               

               Conread position:
               333-666
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               251
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               52, 103
               

               Conread position:
               338-723
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 217
               

               Conread position:
               343-754
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               291
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               39, 185
               

               Conread position:
               345-767
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 149
               

               Conread position:
               346-754
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               288
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               36, 182
               

               Conread position:
               388-641
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               29, 12
               

               Conread position:
               388-756
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               30, 52
               

               Conread position:
               400-616
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               127, 19
               

               Conread position:
               409-603
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               90, 55
               

               Conread position:
               417-767
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 119
               

               Conread position:
               418-714
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               86, 10
               

               Conread position:
               418-766
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 125
               

               Conread position:
               422-756
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               242
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               77, 9
               

               Conread position:
               428-665
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               192
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               74, 19
               

               Conread position:
               431-758
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 85
               

               Conread position:
               431-758
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               68, 97
               

               Conread position:
               438-657
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               64, 54
               

               Conread position:
               439-748
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 99
               

               Conread position:
               442-766
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 22
               

               Conread position:
               447-758
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               231
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               55, 17
               

               Conread position:
               460-733
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               43, 79
               

               Conread position:
               461-715
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               16, 78
               

               Conread position:
               461-766
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 70
               

               Conread position:
               461-766
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 76
               

               Conread position:
               468-765
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               36, 235
               

               Conread position:
               474-766
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               220
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               30, 18
               

               Conread position:
               477-780
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 61
               

               Conread position:
               479-744
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 46
               

               Conread position:
               479-752
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               25, 48
               

               Conread position:
               483-679
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               21, 55
               

               Conread position:
               492-703
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               12, 46
               

               Conread position:
               497-758
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               106, 40
               

               Conread position:
               497-765
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               503-713
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               104, 33
               

               Conread position:
               508-717
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               68, 31
               

               Conread position:
               511-762
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               83, 23
               

               Conread position:
               536-684
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               53, 64
               

               Conread position:
               536-766
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               536-766
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               56, 19
               

               Conread position:
               538-724
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               68, 12
               

               Conread position:
               540-732
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               50, 150
               

               Conread position:
               540-766
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               52, 10
               

               Conread position:
               545-766
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               45, 120
               

               Conread position:
               547-742
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               62, 193
               

               Conread position:
               559-762
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               33, 186
               

               Conread position:
               608-758
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               608-769
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               610-754
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               629-748
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               104, 0
               
Show alignments to all cow chromosomes.