Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8022E11.3
        

               Conread position:
               144-379
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               16, 69
               

               Conread position:
               157-379
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               54, 153
               

               Conread position:
               157-391
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               53, 80
               

               Conread position:
               157-400
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 80
               

               Conread position:
               157-480
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               241
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               55, 79
               

               Conread position:
               157-766
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 69
               

               Conread position:
               158-727
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               158-765
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 18
               

               Conread position:
               158-766
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 79
               

               Conread position:
               158-766
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 29
               

               Conread position:
               158-766
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 68
               

               Conread position:
               159-325
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               51, 77
               

               Conread position:
               159-372
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               159-378
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               159-742
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 77
               

               Conread position:
               159-758
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               160-758
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 11
               

               Conread position:
               162-377
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               49, 74
               

               Conread position:
               162-742
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 25
               

               Conread position:
               166-766
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 43
               

               Conread position:
               167-390
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               43, 69
               

               Conread position:
               168-379
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               42, 62
               

               Conread position:
               169-766
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 38
               

               Conread position:
               171-507
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               247
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               41, 27
               

               Conread position:
               194-769
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 42
               

               Conread position:
               209-766
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 26
               

               Conread position:
               216-690
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 20
               

               Conread position:
               255-501
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               165, 142
               

               Conread position:
               255-567
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               227
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               108, 142
               

               Conread position:
               264-493
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               133, 21
               

               Conread position:
               275-766
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 100
               

               Conread position:
               291-510
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               106, 148
               

               Conread position:
               291-765
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 17
               

               Conread position:
               315-765
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               313
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               277, 63
               

               Conread position:
               322-592
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               37, 65
               

               Conread position:
               327-767
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 109
               

               Conread position:
               345-640
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               223
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               74, 90
               

               Conread position:
               362-696
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               253
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               58, 20
               

               Conread position:
               363-780
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               283
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               28, 82
               

               Conread position:
               367-766
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               288
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               25, 392
               

               Conread position:
               368-744
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               52, 123
               

               Conread position:
               371-612
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               49, 12
               

               Conread position:
               378-758
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               42, 104
               

               Conread position:
               380-767
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 164
               

               Conread position:
               387-637
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               203, 41
               

               Conread position:
               387-755
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               11, 154
               

               Conread position:
               388-750
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               110, 43
               

               Conread position:
               392-726
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               64, 42
               

               Conread position:
               393-769
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 160
               

               Conread position:
               401-719
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 28
               

               Conread position:
               418-766
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 23
               

               Conread position:
               425-766
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 10
               

               Conread position:
               427-761
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 17
               

               Conread position:
               428-766
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 42
               

               Conread position:
               439-780
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               64, 40
               

               Conread position:
               440-766
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               230
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               54, 101
               

               Conread position:
               445-707
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               447-766
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               166, 39
               

               Conread position:
               448-766
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               248
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               55, 22
               

               Conread position:
               448-766
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 90
               

               Conread position:
               454-755
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 13
               

               Conread position:
               460-757
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               43, 52
               

               Conread position:
               460-766
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               130, 42
               

               Conread position:
               461-605
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 16
               

               Conread position:
               461-616
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               38, 77
               

               Conread position:
               463-708
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               40, 19
               

               Conread position:
               469-765
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 71
               

               Conread position:
               486-714
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               17, 55
               

               Conread position:
               488-769
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 50
               

               Conread position:
               489-737
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               237, 48
               

               Conread position:
               496-755
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               96, 41
               

               Conread position:
               497-758
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 40
               

               Conread position:
               498-758
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               92, 32
               

               Conread position:
               500-773
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 37
               

               Conread position:
               504-758
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               80, 33
               

               Conread position:
               505-766
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               201
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               506-766
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               209
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               65, 31
               

               Conread position:
               514-683
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               35, 22
               

               Conread position:
               536-758
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               57, 33
               

               Conread position:
               536-766
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               56, 30
               

               Conread position:
               536-766
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               56, 44
               

               Conread position:
               538-766
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               46, 55
               

               Conread position:
               541-743
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               59, 51
               

               Conread position:
               542-766
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               48, 28
               

               Conread position:
               547-764
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               45, 189
               

               Conread position:
               550-769
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               42, 97
               

               Conread position:
               552-766
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               37, 112
               

               Conread position:
               566-725
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               568-732
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               24, 121
               

               Conread position:
               570-769
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               22, 168
               

               Conread position:
               571-768
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               21, 105
               

               Conread position:
               571-769
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               170
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               25, 21
               

               Conread position:
               581-758
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               11, 165
               

               Conread position:
               589-766
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               35, 19
               

               Conread position:
               608-766
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               154, 68
               

               Conread position:
               608-766
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               90, 40
               

               Conread position:
               609-774
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               160, 122
               

               Conread position:
               610-769
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               51, 124
               

               Conread position:
               614-766
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               629-766
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               131, 104
               

               Conread position:
               665-764
               

               Cow position:
               
               

               Alignm length:
               100
               

               Alignm identity:
               83
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               68, 0
               
Show alignments to all cow chromosomes.