Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8022E11.3
        

               Conread position:
               154-379
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               60, 5
               

               Conread position:
               157-320
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               95, 54
               

               Conread position:
               157-375
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               30, 79
               

               Conread position:
               157-771
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 79
               

               Conread position:
               158-350
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               52, 72
               

               Conread position:
               158-372
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               55, 66
               

               Conread position:
               158-378
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               55, 80
               

               Conread position:
               158-390
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               55, 94
               

               Conread position:
               158-726
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 21
               

               Conread position:
               158-758
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               158-766
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 79
               

               Conread position:
               158-767
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               158-767
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 79
               

               Conread position:
               158-769
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 260
               

               Conread position:
               158-776
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               158-777
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 16
               

               Conread position:
               159-404
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               90, 76
               

               Conread position:
               159-725
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               161-520
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 198
               

               Conread position:
               161-779
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 89
               

               Conread position:
               166-335
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               46, 58
               

               Conread position:
               166-767
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 68
               

               Conread position:
               167-379
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 122
               

               Conread position:
               168-418
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               44, 69
               

               Conread position:
               171-595
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 63
               

               Conread position:
               181-582
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               280
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               62, 54
               

               Conread position:
               183-407
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               209-756
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 23
               

               Conread position:
               218-732
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 17
               

               Conread position:
               221-370
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               9, 69
               

               Conread position:
               251-515
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               141, 59
               

               Conread position:
               256-720
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 26
               

               Conread position:
               269-411
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               273-774
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 113
               

               Conread position:
               277-667
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               266
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               17, 5
               

               Conread position:
               308-686
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 245
               

               Conread position:
               365-758
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               34, 182
               

               Conread position:
               366-766
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 12
               

               Conread position:
               380-749
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               260
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               40, 158
               

               Conread position:
               380-769
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 59
               

               Conread position:
               383-766
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               283
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               36, 95
               

               Conread position:
               384-736
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               256
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               19, 30
               

               Conread position:
               387-758
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               35, 64
               

               Conread position:
               391-603
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 44
               

               Conread position:
               418-750
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               84, 120
               

               Conread position:
               422-667
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               168, 67
               

               Conread position:
               424-680
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               18, 109
               

               Conread position:
               425-766
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 94
               

               Conread position:
               430-766
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 37
               

               Conread position:
               432-756
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               67, 7
               

               Conread position:
               440-753
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               46, 93
               

               Conread position:
               441-766
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               243
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               62, 35
               

               Conread position:
               447-729
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 23
               

               Conread position:
               447-756
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 91
               

               Conread position:
               452-672
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               50, 67
               

               Conread position:
               460-769
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 57
               

               Conread position:
               461-721
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               140, 21
               

               Conread position:
               473-751
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               214
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               119, 9
               

               Conread position:
               475-690
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               28, 57
               

               Conread position:
               487-750
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               16, 90
               

               Conread position:
               488-719
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               16, 50
               

               Conread position:
               492-758
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               11, 46
               

               Conread position:
               494-732
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               193
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               5, 35
               

               Conread position:
               498-766
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               7, 41
               

               Conread position:
               500-768
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               81, 29
               

               Conread position:
               502-769
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               43, 68
               

               Conread position:
               509-767
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               106, 22
               

               Conread position:
               510-766
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 22
               

               Conread position:
               527-769
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               65, 19
               

               Conread position:
               536-753
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               54, 203
               

               Conread position:
               536-763
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               152, 56
               

               Conread position:
               536-765
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               56, 178
               

               Conread position:
               538-770
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               64, 199
               

               Conread position:
               539-766
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               68, 32
               

               Conread position:
               540-766
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 67
               

               Conread position:
               547-766
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               45, 162
               

               Conread position:
               549-763
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               43, 10
               

               Conread position:
               550-766
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               25, 16
               

               Conread position:
               550-766
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               25, 16
               

               Conread position:
               589-770
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               610-766
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               611-767
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               614-766
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               116, 70
               

               Conread position:
               617-764
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               621-754
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               627-775
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               133, 106
               

               Conread position:
               632-766
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               99, 0
               
Show alignments to all cow chromosomes.