Cow genome map
Conread name: | Ss1.1-Pig3-SRG8022E11.3 |
Conread position: | 154-379 |
Cow position: | chr6:1095334-1095111 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 167 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 60, 5 |
Conread position: | 157-320 |
Cow position: | chr6:3374538-3374379 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 122 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 95, 54 |
Conread position: | 157-375 |
Cow position: | chr6:20332457-20332240 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 164 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 30, 79 |
Conread position: | 157-771 |
Cow position: | chr6:45617406-45616798 (view UCSC Genome Browser custom track) |
Alignm length: | 628 |
Alignm identity: | 451 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 79 |
Conread position: | 158-350 |
Cow position: | chr6:38899744-38899551 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 140 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 52, 72 |
Conread position: | 158-372 |
Cow position: | chr6:32428265-32428476 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 160 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 55, 66 |
Conread position: | 158-378 |
Cow position: | chr6:7998043-7998264 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 151 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 55, 80 |
Conread position: | 158-390 |
Cow position: | chr6:51071736-51071969 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 169 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 55, 94 |
Conread position: | 158-726 |
Cow position: | chr6:44377300-44377866 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 434 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 21 |
Conread position: | 158-758 |
Cow position: | chr6:11159975-11159369 (view UCSC Genome Browser custom track) |
Alignm length: | 626 |
Alignm identity: | 440 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 78 |
Conread position: | 158-766 |
Cow position: | chr6:29077762-29078361 (view UCSC Genome Browser custom track) |
Alignm length: | 631 |
Alignm identity: | 454 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 79 |
Conread position: | 158-767 |
Cow position: | chr6:23891585-23892187 (view UCSC Genome Browser custom track) |
Alignm length: | 620 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 78 |
Conread position: | 158-767 |
Cow position: | chr6:41557497-41558117 (view UCSC Genome Browser custom track) |
Alignm length: | 631 |
Alignm identity: | 458 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 79 |
Conread position: | 158-769 |
Cow position: | chr6:31688158-31687555 (view UCSC Genome Browser custom track) |
Alignm length: | 621 |
Alignm identity: | 462 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 260 |
Conread position: | 158-776 |
Cow position: | chr6:3017478-3018114 (view UCSC Genome Browser custom track) |
Alignm length: | 662 |
Alignm identity: | 477 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 78 |
Conread position: | 158-777 |
Cow position: | chr6:62754458-62753855 (view UCSC Genome Browser custom track) |
Alignm length: | 643 |
Alignm identity: | 454 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 16 |
Conread position: | 159-404 |
Cow position: | chr6:29803830-29804075 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 172 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 90, 76 |
Conread position: | 159-725 |
Cow position: | chr6:39917198-39917759 (view UCSC Genome Browser custom track) |
Alignm length: | 589 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 77 |
Conread position: | 161-520 |
Cow position: | chr6:4666765-4666397 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 198 |
Conread position: | 161-779 |
Cow position: | chr6:45692628-45692019 (view UCSC Genome Browser custom track) |
Alignm length: | 628 |
Alignm identity: | 448 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 89 |
Conread position: | 166-335 |
Cow position: | chr6:57686187-57686356 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 125 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 46, 58 |
Conread position: | 166-767 |
Cow position: | chr6:58594067-58593511 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 68 |
Conread position: | 167-379 |
Cow position: | chr6:16337708-16337494 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 149 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 14, 122 |
Conread position: | 168-418 |
Cow position: | chr6:12519536-12519780 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 175 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 44, 69 |
Conread position: | 171-595 |
Cow position: | chr6:69274748-69274318 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 63 |
Conread position: | 181-582 |
Cow position: | chr6:6244855-6244472 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 280 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 62, 54 |
Conread position: | 183-407 |
Cow position: | chr6:27710702-27710921 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 162 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 27, 7 |
Conread position: | 209-756 |
Cow position: | chr6:6635224-6635764 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 23 |
Conread position: | 218-732 |
Cow position: | chr6:23932874-23932398 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 17 |
Conread position: | 221-370 |
Cow position: | chr6:20172348-20172499 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 120 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 9, 69 |
Conread position: | 251-515 |
Cow position: | chr6:19459163-19459436 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 190 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 141, 59 |
Conread position: | 256-720 |
Cow position: | chr6:41157357-41157809 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 26 |
Conread position: | 269-411 |
Cow position: | chr6:66388204-66388055 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 115 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 109, 0 |
Conread position: | 273-774 |
Cow position: | chr6:5678900-5678397 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 113 |
Conread position: | 277-667 |
Cow position: | chr6:29082912-29082550 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 266 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 17, 5 |
Conread position: | 308-686 |
Cow position: | chr6:3374268-3373862 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 245 |
Conread position: | 365-758 |
Cow position: | chr6:66676945-66677358 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 276 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 34, 182 |
Conread position: | 366-766 |
Cow position: | chr6:32428677-32429052 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 12 |
Conread position: | 380-749 |
Cow position: | chr6:66840109-66840484 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 260 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 40, 158 |
Conread position: | 380-769 |
Cow position: | chr6:53416712-53416318 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 59 |
Conread position: | 383-766 |
Cow position: | chr6:6722393-6722776 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 283 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 36, 95 |
Conread position: | 384-736 |
Cow position: | chr6:55661989-55662339 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 256 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 19, 30 |
Conread position: | 387-758 |
Cow position: | chr6:29299808-29300167 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 265 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 35, 64 |
Conread position: | 391-603 |
Cow position: | chr6:39798730-39798515 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 150 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 34, 44 |
Conread position: | 418-750 |
Cow position: | chr6:26692841-26692510 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 236 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 84, 120 |
Conread position: | 422-667 |
Cow position: | chr6:55743360-55743593 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 172 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 168, 67 |
Conread position: | 424-680 |
Cow position: | chr6:812115-811852 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 195 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 18, 109 |
Conread position: | 425-766 |
Cow position: | chr6:20332604-20332941 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 94 |
Conread position: | 430-766 |
Cow position: | chr6:35698120-35697783 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 37 |
Conread position: | 432-756 |
Cow position: | chr6:55659682-55659368 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 221 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 67, 7 |
Conread position: | 440-753 |
Cow position: | chr6:23648613-23648305 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 220 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 46, 93 |
Conread position: | 441-766 |
Cow position: | chr6:1077112-1076789 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 243 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 62, 35 |
Conread position: | 447-729 |
Cow position: | chr6:35831862-35832151 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 23 |
Conread position: | 447-756 |
Cow position: | chr6:44389932-44389625 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 91 |
Conread position: | 452-672 |
Cow position: | chr6:22098342-22098129 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 161 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 50, 67 |
Conread position: | 460-769 |
Cow position: | chr6:14279985-14280297 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 57 |
Conread position: | 461-721 |
Cow position: | chr6:5500729-5500473 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 193 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 140, 21 |
Conread position: | 473-751 |
Cow position: | chr6:34556855-34557128 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 214 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 119, 9 |
Conread position: | 475-690 |
Cow position: | chr6:33311452-33311664 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 162 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 28, 57 |
Conread position: | 487-750 |
Cow position: | chr6:55398145-55398414 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 207 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 16, 90 |
Conread position: | 488-719 |
Cow position: | chr6:39293531-39293755 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 169 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 16, 50 |
Conread position: | 492-758 |
Cow position: | chr6:54295988-54296236 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 186 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 11, 46 |
Conread position: | 494-732 |
Cow position: | chr6:37085258-37085493 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 193 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 5, 35 |
Conread position: | 498-766 |
Cow position: | chr6:40241053-40241315 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 210 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 7, 41 |
Conread position: | 500-768 |
Cow position: | chr6:62327913-62328174 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 192 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 81, 29 |
Conread position: | 502-769 |
Cow position: | chr6:20748749-20749021 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 195 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 43, 68 |
Conread position: | 509-767 |
Cow position: | chr6:4666120-4665873 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 194 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 106, 22 |
Conread position: | 510-766 |
Cow position: | chr6:35126726-35126480 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 22 |
Conread position: | 527-769 |
Cow position: | chr6:19715850-19715608 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 181 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 65, 19 |
Conread position: | 536-753 |
Cow position: | chr6:43596146-43595924 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 161 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 54, 203 |
Conread position: | 536-763 |
Cow position: | chr6:5516931-5516715 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 161 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 152, 56 |
Conread position: | 536-765 |
Cow position: | chr6:27711030-27711265 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 178 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 56, 178 |
Conread position: | 538-770 |
Cow position: | chr6:24496527-24496291 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 172 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 64, 199 |
Conread position: | 539-766 |
Cow position: | chr6:14162209-14161985 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 169 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 68, 32 |
Conread position: | 540-766 |
Cow position: | chr6:50502001-50502225 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 67 |
Conread position: | 547-766 |
Cow position: | chr6:1940086-1939855 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 174 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 45, 162 |
Conread position: | 549-763 |
Cow position: | chr6:44771248-44771452 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 163 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 43, 10 |
Conread position: | 550-766 |
Cow position: | chr6:15261001-15261221 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 164 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 25, 16 |
Conread position: | 550-766 |
Cow position: | chr6:15262046-15262266 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 164 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 25, 16 |
Conread position: | 589-770 |
Cow position: | chr6:3936165-3935988 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 142 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 610-766 |
Cow position: | chr6:24260329-24260175 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 120 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 611-767 |
Cow position: | chr6:35266009-35265861 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 119 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 614-766 |
Cow position: | chr6:16495129-16494977 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 118 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 116, 70 |
Conread position: | 617-764 |
Cow position: | chr6:13092589-13092443 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 119 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 116, 0 |
Conread position: | 621-754 |
Cow position: | chr6:28008965-28008833 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 108 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 112, 0 |
Conread position: | 627-775 |
Cow position: | chr6:24337576-24337427 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 119 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 133, 106 |
Conread position: | 632-766 |
Cow position: | chr6:30287046-30287179 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 103 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 99, 0 |
Show alignments to all cow chromosomes.