Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8022E11.3
        

               Conread position:
               156-727
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 72
               

               Conread position:
               157-379
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               56, 73
               

               Conread position:
               157-668
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 66
               

               Conread position:
               158-350
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               158-367
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               56, 78
               

               Conread position:
               158-380
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               54, 24
               

               Conread position:
               158-381
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               177
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               52, 39
               

               Conread position:
               158-393
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               181
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               61, 78
               

               Conread position:
               158-411
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               54, 10
               

               Conread position:
               158-419
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               158-510
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               158-756
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               158-757
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 78
               

               Conread position:
               158-766
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 47
               

               Conread position:
               158-766
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 79
               

               Conread position:
               158-766
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 14
               

               Conread position:
               158-766
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 78
               

               Conread position:
               158-767
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               158-767
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 49
               

               Conread position:
               159-391
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               159-590
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 53
               

               Conread position:
               159-766
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 282
               

               Conread position:
               160-499
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               10, 51
               

               Conread position:
               161-379
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               41, 75
               

               Conread position:
               161-703
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 60
               

               Conread position:
               175-718
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 30
               

               Conread position:
               184-701
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 156
               

               Conread position:
               187-418
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               193, 50
               

               Conread position:
               248-478
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               172, 38
               

               Conread position:
               251-379
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               270-767
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 190
               

               Conread position:
               281-535
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               160, 108
               

               Conread position:
               296-764
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 120
               

               Conread position:
               297-725
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 86
               

               Conread position:
               313-748
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 165
               

               Conread position:
               333-565
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               70, 50
               

               Conread position:
               356-603
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               29, 11
               

               Conread position:
               363-766
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               188, 19
               

               Conread position:
               379-754
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               61, 163
               

               Conread position:
               385-758
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               39, 151
               

               Conread position:
               386-768
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               274
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               36, 152
               

               Conread position:
               386-769
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               272
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               36, 152
               

               Conread position:
               388-754
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               260
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               32, 98
               

               Conread position:
               400-755
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 45
               

               Conread position:
               418-764
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               42, 18
               

               Conread position:
               419-742
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               432-673
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               71, 100
               

               Conread position:
               444-642
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               59, 101
               

               Conread position:
               460-754
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               43, 26
               

               Conread position:
               460-769
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 35
               

               Conread position:
               477-758
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               220
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               6, 60
               

               Conread position:
               478-703
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 50
               

               Conread position:
               487-636
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               41, 13
               

               Conread position:
               487-758
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               15, 62
               

               Conread position:
               488-757
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               113, 31
               

               Conread position:
               500-758
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 36
               

               Conread position:
               500-768
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               501-765
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               111, 36
               

               Conread position:
               501-766
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               96, 34
               

               Conread position:
               526-769
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               66, 21
               

               Conread position:
               532-739
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               7, 16
               

               Conread position:
               536-720
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               56, 30
               

               Conread position:
               536-758
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               49, 63
               

               Conread position:
               539-756
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               53, 31
               

               Conread position:
               542-757
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               48, 24
               

               Conread position:
               544-774
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               48, 59
               

               Conread position:
               552-748
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               141, 78
               

               Conread position:
               568-727
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 134
               

               Conread position:
               573-769
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               40, 155
               

               Conread position:
               588-757
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               19, 148
               

               Conread position:
               608-765
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               134
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               609-765
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               609-766
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               91, 10
               

               Conread position:
               610-766
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               612-766
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               618-766
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               619-753
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               631-769
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               131, 14
               
Show alignments to all cow chromosomes.