Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8022E11.3
        

               Conread position:
               155-766
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 56
               

               Conread position:
               157-536
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               30, 308
               

               Conread position:
               158-342
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               89, 31
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               18, 79
               

               Conread position:
               158-388
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               53, 95
               

               Conread position:
               158-402
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               53, 34
               

               Conread position:
               158-418
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               48, 56
               

               Conread position:
               158-433
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 96
               

               Conread position:
               158-478
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               52, 72
               

               Conread position:
               158-730
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 78
               

               Conread position:
               158-732
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 14
               

               Conread position:
               158-743
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 32
               

               Conread position:
               158-754
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 79
               

               Conread position:
               158-766
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 71
               

               Conread position:
               158-768
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 78
               

               Conread position:
               159-304
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               83, 70
               

               Conread position:
               159-335
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               90, 48
               

               Conread position:
               159-536
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               273
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               83, 47
               

               Conread position:
               159-722
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 27
               

               Conread position:
               159-766
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 78
               

               Conread position:
               160-557
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 74
               

               Conread position:
               160-766
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 17
               

               Conread position:
               161-757
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 75
               

               Conread position:
               170-482
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               42, 66
               

               Conread position:
               171-766
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 65
               

               Conread position:
               176-730
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 60
               

               Conread position:
               232-766
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 106
               

               Conread position:
               277-758
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 104
               

               Conread position:
               293-634
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               71, 109
               

               Conread position:
               293-766
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 91
               

               Conread position:
               293-769
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 63
               

               Conread position:
               300-766
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 43
               

               Conread position:
               308-646
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               69, 120
               

               Conread position:
               338-724
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 151
               

               Conread position:
               363-686
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               241
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               55, 136
               

               Conread position:
               384-766
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               268
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               62, 50
               

               Conread position:
               388-710
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               234
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               49, 102
               

               Conread position:
               391-670
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               29, 146
               

               Conread position:
               400-763
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               257
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               33, 60
               

               Conread position:
               416-756
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 19
               

               Conread position:
               422-742
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               236
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               20, 119
               

               Conread position:
               424-761
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 7
               

               Conread position:
               431-765
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 26
               

               Conread position:
               447-758
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               52, 84
               

               Conread position:
               447-766
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 22
               

               Conread position:
               448-766
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 90
               

               Conread position:
               448-766
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 44
               

               Conread position:
               460-766
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 65
               

               Conread position:
               463-766
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 108
               

               Conread position:
               473-721
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               30, 100
               

               Conread position:
               477-754
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               26, 60
               

               Conread position:
               487-750
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               15, 22
               

               Conread position:
               492-756
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               11, 39
               

               Conread position:
               496-766
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               14, 7
               

               Conread position:
               498-766
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 40
               

               Conread position:
               501-775
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               264, 36
               

               Conread position:
               534-765
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               58, 32
               

               Conread position:
               535-766
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               225, 39
               

               Conread position:
               536-696
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               75, 97
               

               Conread position:
               536-766
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               61, 56
               

               Conread position:
               538-758
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               52, 62
               

               Conread position:
               544-774
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               182
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               82, 48
               

               Conread position:
               552-766
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               25, 138
               

               Conread position:
               556-764
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               559-755
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               151, 55
               

               Conread position:
               561-765
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               10, 179
               

               Conread position:
               564-767
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               159
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               570-725
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               22, 105
               

               Conread position:
               571-758
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               37, 30
               

               Conread position:
               610-766
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               610-767
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               150, 16
               

               Conread position:
               614-765
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               626-757
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               649-768
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               659-758
               

               Cow position:
               
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               74, 0
               
Show alignments to all cow chromosomes.