Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8022E11.3
        

               Conread position:
               157-766
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 80
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               98, 54
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               54, 24
               

               Conread position:
               158-379
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               85, 71
               

               Conread position:
               158-413
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               91, 24
               

               Conread position:
               158-417
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               54, 97
               

               Conread position:
               158-418
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               52, 28
               

               Conread position:
               158-418
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               97, 29
               

               Conread position:
               158-506
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 80
               

               Conread position:
               158-535
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               158-590
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 16
               

               Conread position:
               158-758
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 72
               

               Conread position:
               158-766
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               159-378
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               51, 98
               

               Conread position:
               159-766
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               160-389
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               68, 27
               

               Conread position:
               166-643
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 71
               

               Conread position:
               166-780
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 70
               

               Conread position:
               167-748
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 53
               

               Conread position:
               168-390
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               81, 37
               

               Conread position:
               170-766
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 66
               

               Conread position:
               173-766
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 36
               

               Conread position:
               178-769
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 58
               

               Conread position:
               194-589
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               280
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               12, 42
               

               Conread position:
               218-490
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               255-725
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 76
               

               Conread position:
               262-557
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               158, 121
               

               Conread position:
               275-637
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 264
               

               Conread position:
               280-719
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 265
               

               Conread position:
               291-766
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 50
               

               Conread position:
               292-680
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 18
               

               Conread position:
               293-766
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 212
               

               Conread position:
               315-766
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 98
               

               Conread position:
               338-684
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               266
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               82, 16
               

               Conread position:
               356-613
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               148, 43
               

               Conread position:
               373-778
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               57, 13
               

               Conread position:
               378-750
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               21, 9
               

               Conread position:
               378-753
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 115
               

               Conread position:
               380-766
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 165
               

               Conread position:
               386-765
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               34, 156
               

               Conread position:
               388-622
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               62, 31
               

               Conread position:
               392-749
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               111, 46
               

               Conread position:
               418-766
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               83, 114
               

               Conread position:
               422-766
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 44
               

               Conread position:
               424-758
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 107
               

               Conread position:
               430-732
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               18, 46
               

               Conread position:
               451-766
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               150, 40
               

               Conread position:
               460-603
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 78
               

               Conread position:
               460-756
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 58
               

               Conread position:
               460-757
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               460-766
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               128, 35
               

               Conread position:
               460-766
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               218
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               42, 60
               

               Conread position:
               473-714
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               30, 67
               

               Conread position:
               492-766
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               11, 26
               

               Conread position:
               492-771
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 36
               

               Conread position:
               493-748
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 43
               

               Conread position:
               505-766
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               199
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               17, 98
               

               Conread position:
               507-637
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               522-767
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               18, 46
               

               Conread position:
               535-766
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               57, 166
               

               Conread position:
               543-685
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 41
               

               Conread position:
               547-726
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               42, 99
               

               Conread position:
               549-766
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               173
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               43, 24
               

               Conread position:
               551-764
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               65, 15
               

               Conread position:
               553-769
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               39, 185
               

               Conread position:
               561-766
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               35, 18
               

               Conread position:
               564-728
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               565-754
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               26, 42
               

               Conread position:
               569-710
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 38
               

               Conread position:
               571-758
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               20, 39
               

               Conread position:
               572-766
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               22, 168
               

               Conread position:
               573-725
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 96
               

               Conread position:
               582-766
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               25, 43
               

               Conread position:
               589-749
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               17, 139
               

               Conread position:
               589-765
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               17, 72
               

               Conread position:
               605-766
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               610-758
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               610-766
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               610-766
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               100, 30
               

               Conread position:
               614-766
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               626-766
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               639-767
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               94, 0
               
Show alignments to all cow chromosomes.