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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8022G19.5
        

               
Conread position:
               
79-479
               

               
Cow position:
               
chr15:1786578-1786983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 93
               

               
Conread position:
               
99-513
               

               
Cow position:
               
chr15:23567688-23568108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
27, 126
               

               
Conread position:
               
105-366
               

               
Cow position:
               
chr15:33679125-33678870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
18, 171
               

               
Conread position:
               
105-572
               

               
Cow position:
               
chr15:6530415-6530893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 100
               

               
Conread position:
               
108-367
               

               
Cow position:
               
chr15:24821955-24822210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
21, 111
               

               
Conread position:
               
111-631
               

               
Cow position:
               
chr15:33306529-33306018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
115-474
               

               
Cow position:
               
chr15:2615601-2615237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
93, 56
               

               
Conread position:
               
117-328
               

               
Cow position:
               
chr15:28150666-28150451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
122-388
               

               
Cow position:
               
chr15:2994004-2993736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
122-407
               

               
Cow position:
               
chr15:22713417-22713706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
19, 15
               

               
Conread position:
               
124-514
               

               
Cow position:
               
chr15:24044688-24045083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
53, 98
               

               
Conread position:
               
130-319
               

               
Cow position:
               
chr15:5003388-5003196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 88
               

               
Conread position:
               
130-365
               

               
Cow position:
               
chr15:26388429-26388191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
88, 198
               

               
Conread position:
               
130-390
               

               
Cow position:
               
chr15:33605326-33605069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 144
               

               
Conread position:
               
130-645
               

               
Cow position:
               
chr15:43626863-43626348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
94, 41
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr15:35850732-35850388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
77, 48
               

               
Conread position:
               
131-665
               

               
Cow position:
               
chr15:30985876-30986423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
12, 140
               

               
Conread position:
               
133-327
               

               
Cow position:
               
chr15:102917-103110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
10, 50
               

               
Conread position:
               
133-665
               

               
Cow position:
               
chr15:36259192-36259730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 38
               

               
Conread position:
               
137-425
               

               
Cow position:
               
chr15:44209966-44209676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
91, 52
               

               
Conread position:
               
140-519
               

               
Cow position:
               
chr15:16307808-16307435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 31
               

               
Conread position:
               
146-327
               

               
Cow position:
               
chr15:27965983-27965803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
65, 75
               

               
Conread position:
               
147-388
               

               
Cow position:
               
chr15:33662879-33662637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
147-505
               

               
Cow position:
               
chr15:27281247-27280898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
67, 24
               

               
Conread position:
               
147-513
               

               
Cow position:
               
chr15:13515754-13515385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 24
               

               
Conread position:
               
147-513
               

               
Cow position:
               
chr15:28039137-28038795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
264, 24
               

               
Conread position:
               
147-551
               

               
Cow position:
               
chr15:9177826-9178217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
147-627
               

               
Cow position:
               
chr15:8578731-8579235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
67, 24
               

               
Conread position:
               
147-634
               

               
Cow position:
               
chr15:37382018-37381524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
47, 268
               

               
Conread position:
               
147-657
               

               
Cow position:
               
chr15:38162393-38161873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
67, 24
               

               
Conread position:
               
147-661
               

               
Cow position:
               
chr15:22938951-22939452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
147-667
               

               
Cow position:
               
chr15:14505812-14505305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 24
               

               
Conread position:
               
148-319
               

               
Cow position:
               
chr15:17417568-17417738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
74, 26
               

               
Conread position:
               
148-417
               

               
Cow position:
               
chr15:4373860-4373589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
148-522
               

               
Cow position:
               
chr15:47842881-47843242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
259, 56
               

               
Conread position:
               
150-327
               

               
Cow position:
               
chr15:21695792-21695966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
150-455
               

               
Cow position:
               
chr15:38898807-38898500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
68, 21
               

               
Conread position:
               
150-509
               

               
Cow position:
               
chr15:2040575-2040208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 79
               

               
Conread position:
               
151-509
               

               
Cow position:
               
chr15:19397443-19397803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 167
               

               
Conread position:
               
151-513
               

               
Cow position:
               
chr15:21388786-21389145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
95, 20
               

               
Conread position:
               
152-367
               

               
Cow position:
               
chr15:4501353-4501145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
94, 28
               

               
Conread position:
               
152-455
               

               
Cow position:
               
chr15:22751833-22751529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
19, 131
               

               
Conread position:
               
152-565
               

               
Cow position:
               
chr15:33976313-33976733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
68, 19
               

               
Conread position:
               
152-612
               

               
Cow position:
               
chr15:25584709-25585175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
62, 19
               

               
Conread position:
               
154-627
               

               
Cow position:
               
chr15:17084588-17084108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 20
               

               
Conread position:
               
155-328
               

               
Cow position:
               
chr15:29542374-29542204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
155-452
               

               
Cow position:
               
chr15:44641274-44640977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
109, 21
               

               
Conread position:
               
155-474
               

               
Cow position:
               
chr15:20015558-20015234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
53, 16
               

               
Conread position:
               
155-474
               

               
Cow position:
               
chr15:21908818-21908495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
54, 16
               

               
Conread position:
               
155-509
               

               
Cow position:
               
chr15:18781603-18781957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
67, 32
               

               
Conread position:
               
155-554
               

               
Cow position:
               
chr15:20352216-20351814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
155-656
               

               
Cow position:
               
chr15:6226820-6227303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
24, 16
               

               
Conread position:
               
155-707
               

               
Cow position:
               
chr15:45479387-45478819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
156-417
               

               
Cow position:
               
chr15:19279721-19279973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
193, 52
               

               
Conread position:
               
156-420
               

               
Cow position:
               
chr15:41583286-41583021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
156-423
               

               
Cow position:
               
chr15:23716675-23716942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 64
               

               
Conread position:
               
156-466
               

               
Cow position:
               
chr15:23703149-23702845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
53, 15
               

               
Conread position:
               
157-328
               

               
Cow position:
               
chr15:4925740-4925911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 14
               

               
Conread position:
               
157-335
               

               
Cow position:
               
chr15:22607185-22607010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 66
               

               
Conread position:
               
158-421
               

               
Cow position:
               
chr15:6163521-6163251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
14, 250
               

               
Conread position:
               
158-642
               

               
Cow position:
               
chr15:50322971-50322497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
62, 136
               

               
Conread position:
               
159-370
               

               
Cow position:
               
chr15:21903070-21903281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
15, 63
               

               
Conread position:
               
159-395
               

               
Cow position:
               
chr15:51822515-51822278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
159-554
               

               
Cow position:
               
chr15:52454819-52454416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
63, 272
               

               
Conread position:
               
159-670
               

               
Cow position:
               
chr15:7191889-7192385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
55, 12
               

               
Conread position:
               
160-329
               

               
Cow position:
               
chr15:37238245-37238081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
58, 89
               

               
Conread position:
               
160-411
               

               
Cow position:
               
chr15:34104639-34104389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
62, 138
               

               
Conread position:
               
160-449
               

               
Cow position:
               
chr15:5008394-5008101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
161-327
               

               
Cow position:
               
chr15:11675268-11675435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
53, 60
               

               
Conread position:
               
161-329
               

               
Cow position:
               
chr15:16449075-16448917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
48, 10
               

               
Conread position:
               
161-349
               

               
Cow position:
               
chr15:28513717-28513915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
110, 10
               

               
Conread position:
               
161-457
               

               
Cow position:
               
chr15:15707749-15708039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
206, 25
               

               
Conread position:
               
161-705
               

               
Cow position:
               
chr15:7430349-7429780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
48, 10
               

               
Conread position:
               
162-295
               

               
Cow position:
               
chr15:42528984-42528852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-328
               

               
Cow position:
               
chr15:9512442-9512276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
162-328
               

               
Cow position:
               
chr15:14757796-14757963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
33, 12
               

               
Conread position:
               
162-328
               

               
Cow position:
               
chr15:17164585-17164751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 97
               

               
Conread position:
               
162-328
               

               
Cow position:
               
chr15:29475944-29475778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
162-329
               

               
Cow position:
               
chr15:52739751-52739914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
19, 55
               

               
Conread position:
               
162-335
               

               
Cow position:
               
chr15:12037575-12037398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
162-335
               

               
Cow position:
               
chr15:37964910-37964740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
162-336
               

               
Cow position:
               
chr15:10450535-10450706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
162-350
               

               
Cow position:
               
chr15:488676-488487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
162-350
               

               
Cow position:
               
chr15:1735725-1735914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-350
               

               
Cow position:
               
chr15:28981836-28981648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-350
               

               
Cow position:
               
chr15:43239841-43239652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-366
               

               
Cow position:
               
chr15:31460322-31460117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
49, 9
               

               
Conread position:
               
162-366
               

               
Cow position:
               
chr15:53101958-53101756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
170, 9
               

               
Conread position:
               
162-367
               

               
Cow position:
               
chr15:25110797-25110995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-367
               

               
Cow position:
               
chr15:33314077-33314281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
162-394
               

               
Cow position:
               
chr15:13669534-13669755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
162-412
               

               
Cow position:
               
chr15:31283738-31283495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
162-416
               

               
Cow position:
               
chr15:32263008-32263266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-420
               

               
Cow position:
               
chr15:7841919-7842181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 240
               

               
Conread position:
               
162-420
               

               
Cow position:
               
chr15:22160949-22160697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
162-420
               

               
Cow position:
               
chr15:44356845-44356582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-420
               

               
Cow position:
               
chr15:47803896-47803646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-424
               

               
Cow position:
               
chr15:5020957-5021222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
64, 12
               

               
Conread position:
               
162-424
               

               
Cow position:
               
chr15:49190967-49190700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
162-431
               

               
Cow position:
               
chr15:7268195-7268467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-431
               

               
Cow position:
               
chr15:8643640-8643368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-432
               

               
Cow position:
               
chr15:3837865-3838139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-432
               

               
Cow position:
               
chr15:24088501-24088775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-432
               

               
Cow position:
               
chr15:24129017-24128753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-443
               

               
Cow position:
               
chr15:39082569-39082299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
249, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr15:348917-349208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr15:1267961-1268252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr15:2534330-2534621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr15:4641052-4641342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr15:9160173-9159883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr15:13431758-13432049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr15:14378970-14378679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr15:21958590-21958881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr15:23554813-23554522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr15:25181232-25180941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr15:27015620-27015329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr15:45707896-45708187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr15:49307392-49307680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr15:50142858-50143149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr15:53053675-53053966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr15:5479839-5479544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr15:7453071-7452775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr15:15138962-15138668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr15:32292795-32292499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr15:43756556-43756260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-455
               

               
Cow position:
               
chr15:5498659-5498957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
162-458
               

               
Cow position:
               
chr15:38199205-38199505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-459
               

               
Cow position:
               
chr15:2590991-2591291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-460
               

               
Cow position:
               
chr15:24285358-24285051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
20, 9
               

               
Conread position:
               
162-469
               

               
Cow position:
               
chr15:31271022-31271333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-469
               

               
Cow position:
               
chr15:44355560-44355249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-469
               

               
Cow position:
               
chr15:50141926-50141615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr15:3004637-3004325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr15:3782369-3782681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr15:4139315-4139004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr15:16345071-16344759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr15:24602781-24602469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr15:31084848-31084536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr15:31489651-31489960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr15:33258405-33258093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr15:36854356-36854667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr15:38000659-38000347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr15:39016024-39015712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-471
               

               
Cow position:
               
chr15:22811895-22811582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-471
               

               
Cow position:
               
chr15:53419716-53419403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr15:3734508-3734192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr15:5938795-5938479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr15:6562648-6562331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr15:8031316-8031003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-476
               

               
Cow position:
               
chr15:237098-236791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-479
               

               
Cow position:
               
chr15:22255521-22255842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-479
               

               
Cow position:
               
chr15:31767647-31767326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
162-507
               

               
Cow position:
               
chr15:21832054-21832411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-509
               

               
Cow position:
               
chr15:363388-363048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
162-509
               

               
Cow position:
               
chr15:4389346-4389694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
162-509
               

               
Cow position:
               
chr15:6385729-6385388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
162-509
               

               
Cow position:
               
chr15:20267010-20266658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
162-509
               

               
Cow position:
               
chr15:20472176-20472525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-509
               

               
Cow position:
               
chr15:38984273-38984628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-513
               

               
Cow position:
               
chr15:16616564-16616212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
162-513
               

               
Cow position:
               
chr15:26404639-26404302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-515
               

               
Cow position:
               
chr15:32064710-32064352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 164
               

               
Conread position:
               
162-522
               

               
Cow position:
               
chr15:18720684-18720323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
162-526
               

               
Cow position:
               
chr15:10336121-10335763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 9
               

               
Conread position:
               
162-591
               

               
Cow position:
               
chr15:26911711-26912136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 12
               

               
Conread position:
               
162-599
               

               
Cow position:
               
chr15:23531093-23530648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
162-607
               

               
Cow position:
               
chr15:31949370-31948925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-616
               

               
Cow position:
               
chr15:38806129-38806592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
172, 12
               

               
Conread position:
               
162-622
               

               
Cow position:
               
chr15:39490281-39490754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
162-622
               

               
Cow position:
               
chr15:52482459-52482922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
162-622
               

               
Cow position:
               
chr15:53164389-53163927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
177, 9
               

               
Conread position:
               
162-627
               

               
Cow position:
               
chr15:4676636-4677096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
47, 12
               

               
Conread position:
               
162-627
               

               
Cow position:
               
chr15:24968157-24967703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 9
               

               
Conread position:
               
162-628
               

               
Cow position:
               
chr15:4485514-4485049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
162-638
               

               
Cow position:
               
chr15:29026508-29026992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-642
               

               
Cow position:
               
chr15:4138505-4138020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-650
               

               
Cow position:
               
chr15:26079000-26079470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
162-654
               

               
Cow position:
               
chr15:25208390-25208884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 192
               

               
Conread position:
               
162-656
               

               
Cow position:
               
chr15:28924399-28924890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
162-660
               

               
Cow position:
               
chr15:20458930-20459445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
162-660
               

               
Cow position:
               
chr15:32979664-32980169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-663
               

               
Cow position:
               
chr15:36621788-36621263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
162-664
               

               
Cow position:
               
chr15:45049-45558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 9
               

               
Conread position:
               
162-742
               

               
Cow position:
               
chr15:17196515-17195927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
163-333
               

               
Cow position:
               
chr15:30725639-30725469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
163-335
               

               
Cow position:
               
chr15:24976821-24976993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
46, 58
               

               
Conread position:
               
163-336
               

               
Cow position:
               
chr15:25618212-25618379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
163-341
               

               
Cow position:
               
chr15:20328828-20328650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
163-358
               

               
Cow position:
               
chr15:15846202-15846007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 8
               

               
Conread position:
               
163-364
               

               
Cow position:
               
chr15:51831223-51831426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
52, 8
               

               
Conread position:
               
163-366
               

               
Cow position:
               
chr15:18284611-18284406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
51, 57
               

               
Conread position:
               
163-399
               

               
Cow position:
               
chr15:5567951-5568194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
163-424
               

               
Cow position:
               
chr15:16741666-16741930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
57, 181
               

               
Conread position:
               
163-449
               

               
Cow position:
               
chr15:9835349-9835640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 166
               

               
Conread position:
               
163-452
               

               
Cow position:
               
chr15:20725248-20725538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
179, 8
               

               
Conread position:
               
163-458
               

               
Cow position:
               
chr15:4753999-4754287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 8
               

               
Conread position:
               
163-471
               

               
Cow position:
               
chr15:11362809-11363118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
163-507
               

               
Cow position:
               
chr15:53353185-53353523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
176, 52
               

               
Conread position:
               
163-563
               

               
Cow position:
               
chr15:16583343-16583726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
48, 8
               

               
Conread position:
               
163-622
               

               
Cow position:
               
chr15:15041064-15041521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
57, 139
               

               
Conread position:
               
163-627
               

               
Cow position:
               
chr15:16543095-16543536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
60, 8
               

               
Conread position:
               
163-630
               

               
Cow position:
               
chr15:6647818-6647349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
46, 113
               

               
Conread position:
               
163-638
               

               
Cow position:
               
chr15:30047166-30047663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 322
               

               
Conread position:
               
163-644
               

               
Cow position:
               
chr15:20390333-20390825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
180, 8
               

               
Conread position:
               
163-669
               

               
Cow position:
               
chr15:21608361-21608859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
51, 58
               

               
Conread position:
               
164-328
               

               
Cow position:
               
chr15:6045945-6046104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
164-334
               

               
Cow position:
               
chr15:40289987-40289817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
164-470
               

               
Cow position:
               
chr15:2211926-2211616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 7
               

               
Conread position:
               
164-506
               

               
Cow position:
               
chr15:16493049-16492701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 239
               

               
Conread position:
               
164-508
               

               
Cow position:
               
chr15:19054619-19054271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 97
               

               
Conread position:
               
164-527
               

               
Cow position:
               
chr15:9871038-9871410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
164-563
               

               
Cow position:
               
chr15:42788793-42789184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 51
               

               
Conread position:
               
164-640
               

               
Cow position:
               
chr15:50957425-50957921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
7, 141
               

               
Conread position:
               
165-283
               

               
Cow position:
               
chr15:12199656-12199777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
165-309
               

               
Cow position:
               
chr15:10230897-10231043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 104
               

               
Conread position:
               
165-327
               

               
Cow position:
               
chr15:23905324-23905477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
165-328
               

               
Cow position:
               
chr15:225072-225238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
165-328
               

               
Cow position:
               
chr15:4642799-4642965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
165-328
               

               
Cow position:
               
chr15:42940779-42940945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
165-328
               

               
Cow position:
               
chr15:48297784-48297614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
165-350
               

               
Cow position:
               
chr15:27759200-27759389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
165-366
               

               
Cow position:
               
chr15:41087493-41087696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
7, 57
               

               
Conread position:
               
165-367
               

               
Cow position:
               
chr15:27123180-27123388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
11, 190
               

               
Conread position:
               
165-392
               

               
Cow position:
               
chr15:6806297-6806532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
165-393
               

               
Cow position:
               
chr15:1702059-1701823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
165-394
               

               
Cow position:
               
chr15:21913515-21913278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
165-395
               

               
Cow position:
               
chr15:6082273-6082507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 110
               

               
Conread position:
               
165-395
               

               
Cow position:
               
chr15:32611422-32611660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
165-411
               

               
Cow position:
               
chr15:39363648-39363892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
165-415
               

               
Cow position:
               
chr15:26421232-26421484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
165, 6
               

               
Conread position:
               
165-420
               

               
Cow position:
               
chr15:7578757-7579020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
165-434
               

               
Cow position:
               
chr15:143864-144135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
44, 6
               

               
Conread position:
               
165-455
               

               
Cow position:
               
chr15:40156-39863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 114
               

               
Conread position:
               
165-501
               

               
Cow position:
               
chr15:34744173-34743844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
8, 146
               

               
Conread position:
               
165-506
               

               
Cow position:
               
chr15:37395301-37395648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 147
               

               
Conread position:
               
165-507
               

               
Cow position:
               
chr15:27732767-27732436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
165-509
               

               
Cow position:
               
chr15:12271958-12271616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
7, 237
               

               
Conread position:
               
165-509
               

               
Cow position:
               
chr15:15233951-15233603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
7, 199
               

               
Conread position:
               
165-509
               

               
Cow position:
               
chr15:37822940-37823302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
7, 217
               

               
Conread position:
               
165-509
               

               
Cow position:
               
chr15:40546812-40547159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
7, 105
               

               
Conread position:
               
165-513
               

               
Cow position:
               
chr15:29340430-29340080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
19, 6
               

               
Conread position:
               
165-613
               

               
Cow position:
               
chr15:19186248-19186702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
165-625
               

               
Cow position:
               
chr15:8962367-8961927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
44, 6
               

               
Conread position:
               
165-627
               

               
Cow position:
               
chr15:17233557-17233088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
83, 6
               

               
Conread position:
               
165-627
               

               
Cow position:
               
chr15:31202375-31201904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
165-653
               

               
Cow position:
               
chr15:44051132-44051604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
139, 6
               

               
Conread position:
               
165-656
               

               
Cow position:
               
chr15:29883496-29882993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
9, 85
               

               
Conread position:
               
165-657
               

               
Cow position:
               
chr15:22532608-22532124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 6
               

               
Conread position:
               
165-658
               

               
Cow position:
               
chr15:16112772-16112267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 55
               

               
Conread position:
               
165-662
               

               
Cow position:
               
chr15:45245180-45245674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 77
               

               
Conread position:
               
165-666
               

               
Cow position:
               
chr15:3699914-3700420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 299
               

               
Conread position:
               
166-347
               

               
Cow position:
               
chr15:5658528-5658348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
166-400
               

               
Cow position:
               
chr15:45111925-45111693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
5, 56
               

               
Conread position:
               
166-642
               

               
Cow position:
               
chr15:5234639-5235104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 8
               

               
Conread position:
               
168-328
               

               
Cow position:
               
chr15:21180520-21180681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
169-315
               

               
Cow position:
               
chr15:50089633-50089487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
169-644
               

               
Cow position:
               
chr15:43913720-43914213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
42, 54
               

               
Conread position:
               
170-328
               

               
Cow position:
               
chr15:37716560-37716717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
44, 50
               

               
Conread position:
               
170-328
               

               
Cow position:
               
chr15:53019760-53019605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
45, 103
               

               
Conread position:
               
170-367
               

               
Cow position:
               
chr15:1830929-1830729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
170-442
               

               
Cow position:
               
chr15:23486810-23487078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
50, 84
               

               
Conread position:
               
170-476
               

               
Cow position:
               
chr15:52380653-52380344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
173, 118
               

               
Conread position:
               
170-491
               

               
Cow position:
               
chr15:5728001-5727691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 104
               

               
Conread position:
               
170-512
               

               
Cow position:
               
chr15:22531424-22531096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
52, 106
               

               
Conread position:
               
170-513
               

               
Cow position:
               
chr15:16640146-16639796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
226, 326
               

               
Conread position:
               
170-524
               

               
Cow position:
               
chr15:27862966-27863318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
98, 7
               

               
Conread position:
               
170-572
               

               
Cow position:
               
chr15:17869931-17870319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
50, 90
               

               
Conread position:
               
170-608
               

               
Cow position:
               
chr15:32226523-32226945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
170-630
               

               
Cow position:
               
chr15:24797451-24797904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
44, 50
               

               
Conread position:
               
170-644
               

               
Cow position:
               
chr15:20370104-20370567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
192, 46
               

               
Conread position:
               
170-644
               

               
Cow position:
               
chr15:49738684-49739131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 113
               

               
Conread position:
               
170-660
               

               
Cow position:
               
chr15:36435569-36435071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 35
               

               
Conread position:
               
170-671
               

               
Cow position:
               
chr15:47990399-47990905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
48, 145
               

               
Conread position:
               
171-309
               

               
Cow position:
               
chr15:38323192-38323053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr15:4728756-4728912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
172-672
               

               
Cow position:
               
chr15:21365839-21366330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
159, 43
               

               
Conread position:
               
173-326
               

               
Cow position:
               
chr15:7855185-7855339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
173-326
               

               
Cow position:
               
chr15:46325004-46324852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
173-328
               

               
Cow position:
               
chr15:693539-693696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
173-328
               

               
Cow position:
               
chr15:7271953-7272108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
110, 52
               

               
Conread position:
               
173-328
               

               
Cow position:
               
chr15:16778687-16778531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
173-358
               

               
Cow position:
               
chr15:41792631-41792444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
173-360
               

               
Cow position:
               
chr15:52197954-52198133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
179, 114
               

               
Conread position:
               
173-366
               

               
Cow position:
               
chr15:29024966-29024769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
173-420
               

               
Cow position:
               
chr15:29272551-29272299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 122
               

               
Conread position:
               
173-424
               

               
Cow position:
               
chr15:692795-692540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 56
               

               
Conread position:
               
173-424
               

               
Cow position:
               
chr15:16937265-16937521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
45, 229
               

               
Conread position:
               
173-432
               

               
Cow position:
               
chr15:45672140-45671876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-449
               

               
Cow position:
               
chr15:2695085-2694804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-449
               

               
Cow position:
               
chr15:10827463-10827744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
173-449
               

               
Cow position:
               
chr15:11595777-11595496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-461
               

               
Cow position:
               
chr15:6586352-6586646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
173-470
               

               
Cow position:
               
chr15:32003423-32003121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 229
               

               
Conread position:
               
173-470
               

               
Cow position:
               
chr15:45944089-45943787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
35, 57
               

               
Conread position:
               
173-470
               

               
Cow position:
               
chr15:51765563-51765263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-474
               

               
Cow position:
               
chr15:1251127-1250820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
35, 229
               

               
Conread position:
               
173-474
               

               
Cow position:
               
chr15:25510813-25511119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
36, 56
               

               
Conread position:
               
173-479
               

               
Cow position:
               
chr15:25203363-25203055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 170
               

               
Conread position:
               
173-561
               

               
Cow position:
               
chr15:4093565-4093959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 240
               

               
Conread position:
               
174-350
               

               
Cow position:
               
chr15:11656613-11656435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
174-438
               

               
Cow position:
               
chr15:44256836-44256571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
47, 92
               

               
Conread position:
               
174-449
               

               
Cow position:
               
chr15:29018198-29018478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
174-449
               

               
Cow position:
               
chr15:29807178-29807456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
174-450
               

               
Cow position:
               
chr15:1653582-1653863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 66
               

               
Conread position:
               
174-512
               

               
Cow position:
               
chr15:51898583-51898248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
156, 45
               

               
Conread position:
               
175-335
               

               
Cow position:
               
chr15:10487539-10487699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
34, 46
               

               
Conread position:
               
175-346
               

               
Cow position:
               
chr15:12836962-12837126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 46
               

               
Conread position:
               
175-347
               

               
Cow position:
               
chr15:36618538-36618363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
175-366
               

               
Cow position:
               
chr15:241206-241011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
175-410
               

               
Cow position:
               
chr15:18715587-18715361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
40, 50
               

               
Conread position:
               
175-438
               

               
Cow position:
               
chr15:47274731-47274468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
36, 46
               

               
Conread position:
               
175-471
               

               
Cow position:
               
chr15:46861001-46860700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 54
               

               
Conread position:
               
175-486
               

               
Cow position:
               
chr15:11289432-11289114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 132
               

               
Conread position:
               
175-513
               

               
Cow position:
               
chr15:5730295-5729960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
34, 46
               

               
Conread position:
               
175-563
               

               
Cow position:
               
chr15:34140338-34139945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
39, 45
               

               
Conread position:
               
175-622
               

               
Cow position:
               
chr15:28140714-28141167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
37, 226
               

               
Conread position:
               
175-638
               

               
Cow position:
               
chr15:6905900-6905430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 359
               

               
Conread position:
               
175-683
               

               
Cow position:
               
chr15:4788613-4789115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
54, 98
               

               
Conread position:
               
176-326
               

               
Cow position:
               
chr15:16927727-16927871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
176-327
               

               
Cow position:
               
chr15:52154431-52154582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
42, 86
               

               
Conread position:
               
176-335
               

               
Cow position:
               
chr15:11574313-11574155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
109, 33
               

               
Conread position:
               
176-342
               

               
Cow position:
               
chr15:6657462-6657301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 44
               

               
Conread position:
               
176-366
               

               
Cow position:
               
chr15:18206154-18206343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
46, 110
               

               
Conread position:
               
176-395
               

               
Cow position:
               
chr15:23332529-23332739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
176-443
               

               
Cow position:
               
chr15:52611670-52611396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
37, 45
               

               
Conread position:
               
176-476
               

               
Cow position:
               
chr15:40009293-40009598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
37, 45
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr15:12553966-12554303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
46, 223
               

               
Conread position:
               
176-513
               

               
Cow position:
               
chr15:11011252-11011584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
46, 99
               

               
Conread position:
               
176-517
               

               
Cow position:
               
chr15:46868355-46868700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
44, 97
               

               
Conread position:
               
176-526
               

               
Cow position:
               
chr15:10456660-10457006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
193, 24
               

               
Conread position:
               
176-561
               

               
Cow position:
               
chr15:6970341-6969960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 30
               

               
Conread position:
               
176-563
               

               
Cow position:
               
chr15:33303690-33303296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
44, 39
               

               
Conread position:
               
176-627
               

               
Cow position:
               
chr15:1329744-1330207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 43
               

               
Conread position:
               
176-627
               

               
Cow position:
               
chr15:14871104-14870657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 314
               

               
Conread position:
               
176-628
               

               
Cow position:
               
chr15:1298093-1297647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 44
               

               
Conread position:
               
176-641
               

               
Cow position:
               
chr15:30800239-30799785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
176-641
               

               
Cow position:
               
chr15:46563122-46563589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
44, 161
               

               
Conread position:
               
176-656
               

               
Cow position:
               
chr15:16823293-16822824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 44
               

               
Conread position:
               
176-660
               

               
Cow position:
               
chr15:21894141-21893650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 47
               

               
Conread position:
               
177-328
               

               
Cow position:
               
chr15:13846221-13846369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 117
               

               
Conread position:
               
177-437
               

               
Cow position:
               
chr15:36423011-36422753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
6, 13
               

               
Conread position:
               
177-442
               

               
Cow position:
               
chr15:12316280-12316016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
45, 99
               

               
Conread position:
               
177-489
               

               
Cow position:
               
chr15:36781980-36782282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
184, 28
               

               
Conread position:
               
177-557
               

               
Cow position:
               
chr15:16476387-16476760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
177-644
               

               
Cow position:
               
chr15:47042281-47042758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 151
               

               
Conread position:
               
177-644
               

               
Cow position:
               
chr15:51427467-51427941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
45, 108
               

               
Conread position:
               
178-513
               

               
Cow position:
               
chr15:41619831-41620171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
42, 111
               

               
Conread position:
               
178-627
               

               
Cow position:
               
chr15:22553170-22553639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 9
               

               
Conread position:
               
178-660
               

               
Cow position:
               
chr15:19403332-19402874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 42
               

               
Conread position:
               
179-318
               

               
Cow position:
               
chr15:9493940-9494079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 41
               

               
Conread position:
               
179-411
               

               
Cow position:
               
chr15:50059208-50059449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
179-656
               

               
Cow position:
               
chr15:26896358-26896826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 41
               

               
Conread position:
               
179-657
               

               
Cow position:
               
chr15:12785790-12785302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
36, 242
               

               
Conread position:
               
180-395
               

               
Cow position:
               
chr15:5571283-5571502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 105
               

               
Conread position:
               
180-523
               

               
Cow position:
               
chr15:12170591-12170253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
216, 36
               

               
Conread position:
               
181-415
               

               
Cow position:
               
chr15:53118672-53118435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
181-460
               

               
Cow position:
               
chr15:17260805-17261088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
181-526
               

               
Cow position:
               
chr15:41360610-41360944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
21, 116
               

               
Conread position:
               
181-656
               

               
Cow position:
               
chr15:22532013-22531546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 167
               

               
Conread position:
               
181-659
               

               
Cow position:
               
chr15:608514-608010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
41, 8
               

               
Conread position:
               
182-328
               

               
Cow position:
               
chr15:41418466-41418611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 122
               

               
Conread position:
               
182-366
               

               
Cow position:
               
chr15:22168409-22168227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 104
               

               
Conread position:
               
182-455
               

               
Cow position:
               
chr15:53680417-53680683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 39
               

               
Conread position:
               
182-512
               

               
Cow position:
               
chr15:23767914-23768237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
38, 92
               

               
Conread position:
               
182-514
               

               
Cow position:
               
chr15:50302537-50302202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 39
               

               
Conread position:
               
182-660
               

               
Cow position:
               
chr15:21941498-21941978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
182-660
               

               
Cow position:
               
chr15:25666872-25667352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 111
               

               
Conread position:
               
183-312
               

               
Cow position:
               
chr15:26922630-26922757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
32, 37
               

               
Conread position:
               
183-328
               

               
Cow position:
               
chr15:29861710-29861566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
31, 37
               

               
Conread position:
               
183-328
               

               
Cow position:
               
chr15:37985211-37985352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
31, 37
               

               
Conread position:
               
183-339
               

               
Cow position:
               
chr15:12359596-12359442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
183-367
               

               
Cow position:
               
chr15:31085884-31085704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
27, 38
               

               
Conread position:
               
183-383
               

               
Cow position:
               
chr15:9062244-9062448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
183-395
               

               
Cow position:
               
chr15:1128339-1128131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
178, 23
               

               
Conread position:
               
183-395
               

               
Cow position:
               
chr15:8382590-8382807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
183-401
               

               
Cow position:
               
chr15:19725390-19725615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
183-412
               

               
Cow position:
               
chr15:33680998-33680773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
43, 100
               

               
Conread position:
               
183-417
               

               
Cow position:
               
chr15:32287408-32287642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
183-418
               

               
Cow position:
               
chr15:9642783-9642544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
147, 56
               

               
Conread position:
               
183-477
               

               
Cow position:
               
chr15:43248421-43248720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
183-480
               

               
Cow position:
               
chr15:2669253-2668957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 37
               

               
Conread position:
               
183-512
               

               
Cow position:
               
chr15:4535257-4534931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 100
               

               
Conread position:
               
183-627
               

               
Cow position:
               
chr15:24994178-24994609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
367, 19
               

               
Conread position:
               
183-643
               

               
Cow position:
               
chr15:20486867-20487315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
183-655
               

               
Cow position:
               
chr15:19771477-19771013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
17, 61
               

               
Conread position:
               
183-656
               

               
Cow position:
               
chr15:38883507-38883016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
7, 39
               

               
Conread position:
               
183-657
               

               
Cow position:
               
chr15:1083030-1083499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
178, 23
               

               
Conread position:
               
183-670
               

               
Cow position:
               
chr15:17100366-17100845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
145, 36
               

               
Conread position:
               
184-330
               

               
Cow position:
               
chr15:28450241-28450096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
36, 31
               

               
Conread position:
               
184-415
               

               
Cow position:
               
chr15:17683377-17683145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
184-509
               

               
Cow position:
               
chr15:11692687-11693015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
184-562
               

               
Cow position:
               
chr15:29604366-29604726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
7, 85
               

               
Conread position:
               
184-610
               

               
Cow position:
               
chr15:6462153-6462574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 89
               

               
Conread position:
               
184-654
               

               
Cow position:
               
chr15:11658216-11658709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 260
               

               
Conread position:
               
184-656
               

               
Cow position:
               
chr15:35642369-35641885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 37
               

               
Conread position:
               
185-328
               

               
Cow position:
               
chr15:23054602-23054459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 130
               

               
Conread position:
               
185-623
               

               
Cow position:
               
chr15:2952782-2953227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
185-642
               

               
Cow position:
               
chr15:40957927-40957464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
30, 91
               

               
Conread position:
               
185-672
               

               
Cow position:
               
chr15:23798171-23798666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
28, 347
               

               
Conread position:
               
186-480
               

               
Cow position:
               
chr15:30820488-30820785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 35
               

               
Conread position:
               
186-513
               

               
Cow position:
               
chr15:22137030-22136709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 89
               

               
Conread position:
               
186-660
               

               
Cow position:
               
chr15:39406081-39405611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
186-667
               

               
Cow position:
               
chr15:27972868-27973345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 35
               

               
Conread position:
               
187-328
               

               
Cow position:
               
chr15:15215366-15215228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
35, 96
               

               
Conread position:
               
187-328
               

               
Cow position:
               
chr15:49200440-49200579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
107, 34
               

               
Conread position:
               
187-627
               

               
Cow position:
               
chr15:21803311-21803763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
34, 98
               

               
Conread position:
               
188-510
               

               
Cow position:
               
chr15:45323128-45322803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
142, 94
               

               
Conread position:
               
188-644
               

               
Cow position:
               
chr15:794668-795132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 33
               

               
Conread position:
               
189-350
               

               
Cow position:
               
chr15:39969652-39969817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
189-383
               

               
Cow position:
               
chr15:29792568-29792759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
20, 32
               

               
Conread position:
               
190-524
               

               
Cow position:
               
chr15:35417279-35417617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 30
               

               
Conread position:
               
191-662
               

               
Cow position:
               
chr15:8665240-8665741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
31, 82
               

               
Conread position:
               
192-591
               

               
Cow position:
               
chr15:39621679-39621268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
30, 79
               

               
Conread position:
               
192-654
               

               
Cow position:
               
chr15:40798085-40798539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
157, 215
               

               
Conread position:
               
193-328
               

               
Cow position:
               
chr15:52317362-52317230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 26
               

               
Conread position:
               
193-415
               

               
Cow position:
               
chr15:52982156-52981935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 83
               

               
Conread position:
               
193-509
               

               
Cow position:
               
chr15:15881273-15880949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
137, 26
               

               
Conread position:
               
193-513
               

               
Cow position:
               
chr15:39599780-39599466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
193-538
               

               
Cow position:
               
chr15:33285222-33284872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
193-627
               

               
Cow position:
               
chr15:29810449-29810027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 98
               

               
Conread position:
               
193-643
               

               
Cow position:
               
chr15:26158276-26158713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
194-627
               

               
Cow position:
               
chr15:10245670-10246093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
173, 25
               

               
Conread position:
               
195-655
               

               
Cow position:
               
chr15:22938439-22938893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
27, 88
               

               
Conread position:
               
197-449
               

               
Cow position:
               
chr15:21523126-21522869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
25, 71
               

               
Conread position:
               
197-627
               

               
Cow position:
               
chr15:47822135-47821735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
155, 27
               

               
Conread position:
               
198-627
               

               
Cow position:
               
chr15:30002024-30001598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
77, 211
               

               
Conread position:
               
198-628
               

               
Cow position:
               
chr15:31857927-31857490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
198-644
               

               
Cow position:
               
chr15:36392004-36391556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
201-317
               

               
Cow position:
               
chr15:36354848-36354730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
201-328
               

               
Cow position:
               
chr15:36787640-36787512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
201-498
               

               
Cow position:
               
chr15:40095178-40095480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
201-627
               

               
Cow position:
               
chr15:41225231-41225670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
157, 15
               

               
Conread position:
               
201-678
               

               
Cow position:
               
chr15:21421273-21420801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
202-523
               

               
Cow position:
               
chr15:13387414-13387086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
20, 273
               

               
Conread position:
               
202-551
               

               
Cow position:
               
chr15:40999727-41000085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 286
               

               
Conread position:
               
204-471
               

               
Cow position:
               
chr15:47105365-47105102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
206-453
               

               
Cow position:
               
chr15:22095446-22095202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
125, 13
               

               
Conread position:
               
206-619
               

               
Cow position:
               
chr15:17763226-17762818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
146, 59
               

               
Conread position:
               
206-660
               

               
Cow position:
               
chr15:12304968-12304509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 80
               

               
Conread position:
               
206-686
               

               
Cow position:
               
chr15:49922466-49921978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
123, 69
               

               
Conread position:
               
207-367
               

               
Cow position:
               
chr15:38683538-38683378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
127, 12
               

               
Conread position:
               
207-662
               

               
Cow position:
               
chr15:225477-225933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
15, 110
               

               
Conread position:
               
208-328
               

               
Cow position:
               
chr15:33243481-33243361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
87, 11
               

               
Conread position:
               
208-507
               

               
Cow position:
               
chr15:21908257-21907960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
154, 11
               

               
Conread position:
               
209-644
               

               
Cow position:
               
chr15:39598560-39598130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
158, 10
               

               
Conread position:
               
215-513
               

               
Cow position:
               
chr15:24128345-24128050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 17
               

               
Conread position:
               
216-565
               

               
Cow position:
               
chr15:26573705-26573342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 199
               

               
Conread position:
               
216-627
               

               
Cow position:
               
chr15:12723402-12722986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
120, 59
               

               
Conread position:
               
219-328
               

               
Cow position:
               
chr15:9785782-9785891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
219-455
               

               
Cow position:
               
chr15:10846035-10845796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
111, 55
               

               
Conread position:
               
219-560
               

               
Cow position:
               
chr15:20390965-20391298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
148, 82
               

               
Conread position:
               
219-660
               

               
Cow position:
               
chr15:20082073-20081645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
177, 158
               

               
Conread position:
               
220-335
               

               
Cow position:
               
chr15:43673596-43673711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
110, 59
               

               
Conread position:
               
221-643
               

               
Cow position:
               
chr15:11995714-11996142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
109, 37
               

               
Conread position:
               
222-638
               

               
Cow position:
               
chr15:47843797-47844197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
334, 135
               

               
Conread position:
               
222-656
               

               
Cow position:
               
chr15:27900194-27900635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
81, 17
               

               
Conread position:
               
227-659
               

               
Cow position:
               
chr15:6168210-6168664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 342
               

               
Conread position:
               
228-653
               

               
Cow position:
               
chr15:44658664-44658241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
108, 42
               

               
Conread position:
               
229-647
               

               
Cow position:
               
chr15:1722548-1722959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
140, 17
               

               
Conread position:
               
230-538
               

               
Cow position:
               
chr15:24305176-24305487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
131, 99
               

               
Conread position:
               
231-644
               

               
Cow position:
               
chr15:26918972-26919384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
23, 98
               

               
Conread position:
               
231-659
               

               
Cow position:
               
chr15:23696616-23697029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
136, 42
               

               
Conread position:
               
234-627
               

               
Cow position:
               
chr15:5071802-5072196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 38
               

               
Conread position:
               
235-619
               

               
Cow position:
               
chr15:1804031-1804423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
95, 175
               

               
Conread position:
               
240-627
               

               
Cow position:
               
chr15:5420590-5420980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
156, 82
               

               
Conread position:
               
241-627
               

               
Cow position:
               
chr15:16667208-16667596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
156, 299
               

               
Conread position:
               
241-627
               

               
Cow position:
               
chr15:21821629-21822025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
39, 167
               

               
Conread position:
               
243-509
               

               
Cow position:
               
chr15:8610029-8610297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
87, 178
               

               
Conread position:
               
244-620
               

               
Cow position:
               
chr15:36773406-36773781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
95, 171
               

               
Conread position:
               
244-660
               

               
Cow position:
               
chr15:7456985-7456589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
125, 31
               

               
Conread position:
               
244-669
               

               
Cow position:
               
chr15:2968621-2968193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
92, 27
               

               
Conread position:
               
245-644
               

               
Cow position:
               
chr15:31137174-31137580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
85, 178
               

               
Conread position:
               
245-656
               

               
Cow position:
               
chr15:41125280-41125682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
127, 167
               

               
Conread position:
               
249-639
               

               
Cow position:
               
chr15:32323922-32324318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
82, 38
               

               
Conread position:
               
252-455
               

               
Cow position:
               
chr15:5715832-5715628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
100, 23
               

               
Conread position:
               
253-480
               

               
Cow position:
               
chr15:38103611-38103833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
104, 62
               

               
Conread position:
               
253-627
               

               
Cow position:
               
chr15:25907192-25906820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
23, 86
               

               
Conread position:
               
253-664
               

               
Cow position:
               
chr15:45585004-45584587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 98
               

               
Conread position:
               
254-492
               

               
Cow position:
               
chr15:38877025-38877264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
142, 86
               

               
Conread position:
               
260-622
               

               
Cow position:
               
chr15:38838022-38837651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
68, 138
               

               
Conread position:
               
260-664
               

               
Cow position:
               
chr15:245046-244649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
147, 36
               

               
Conread position:
               
263-660
               

               
Cow position:
               
chr15:275916-275509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
148, 94
               

               
Conread position:
               
266-509
               

               
Cow position:
               
chr15:22871876-22871636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 134
               

               
Conread position:
               
269-509
               

               
Cow position:
               
chr15:47279873-47280116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 145
               

               
Conread position:
               
272-654
               

               
Cow position:
               
chr15:23275798-23275410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
76, 124
               

               
Conread position:
               
275-627
               

               
Cow position:
               
chr15:36888084-36887741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
82, 120
               

               
Conread position:
               
275-628
               

               
Cow position:
               
chr15:8354304-8353942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
93, 341
               

               
Conread position:
               
280-513
               

               
Cow position:
               
chr15:6905317-6905096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
115, 61
               

               
Conread position:
               
280-630
               

               
Cow position:
               
chr15:18671192-18671550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
22, 302
               

               
Conread position:
               
289-656
               

               
Cow position:
               
chr15:34897010-34896634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
11, 284
               

               
Conread position:
               
295-657
               

               
Cow position:
               
chr15:286719-286344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
70, 41
               

               
Conread position:
               
307-665
               

               
Cow position:
               
chr15:36353897-36353535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 74
               

               
Conread position:
               
307-666
               

               
Cow position:
               
chr15:53716661-53716295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 62
               

               
Conread position:
               
316-657
               

               
Cow position:
               
chr15:30470750-30471105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
50, 299
               

               
Conread position:
               
374-672
               

               
Cow position:
               
chr15:4694903-4694607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 226
               
Show alignments to all cow chromosomes.