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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8022G19.5
        

               
Conread position:
               
99-394
               

               
Cow position:
               
chr2:41949674-41949981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
61, 127
               

               
Conread position:
               
99-600
               

               
Cow position:
               
chr2:46357500-46357994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
30, 24
               

               
Conread position:
               
100-330
               

               
Cow position:
               
chr2:77281599-77281827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
110, 71
               

               
Conread position:
               
101-472
               

               
Cow position:
               
chr2:76183146-76182781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 8
               

               
Conread position:
               
101-666
               

               
Cow position:
               
chr2:18997392-18997942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 109
               

               
Conread position:
               
104-662
               

               
Cow position:
               
chr2:78116694-78116130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
105-349
               

               
Cow position:
               
chr2:16412046-16412274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
105-455
               

               
Cow position:
               
chr2:27076376-27076723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 118
               

               
Conread position:
               
105-513
               

               
Cow position:
               
chr2:549652-549259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
84, 63
               

               
Conread position:
               
107-470
               

               
Cow position:
               
chr2:2574472-2574841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
23, 72
               

               
Conread position:
               
108-563
               

               
Cow position:
               
chr2:44191146-44191605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 125
               

               
Conread position:
               
111-313
               

               
Cow position:
               
chr2:33391799-33391596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
111, 19
               

               
Conread position:
               
111-328
               

               
Cow position:
               
chr2:56771514-56771722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
111, 19
               

               
Conread position:
               
111-375
               

               
Cow position:
               
chr2:14853990-14854244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
111-631
               

               
Cow position:
               
chr2:72527622-72528154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 13
               

               
Conread position:
               
112-660
               

               
Cow position:
               
chr2:46745588-46746153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 112
               

               
Conread position:
               
114-366
               

               
Cow position:
               
chr2:26555917-26555667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
63, 188
               

               
Conread position:
               
114-371
               

               
Cow position:
               
chr2:50352533-50352794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
13, 109
               

               
Conread position:
               
117-627
               

               
Cow position:
               
chr2:59593073-59592579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
59, 238
               

               
Conread position:
               
118-325
               

               
Cow position:
               
chr2:72410572-72410365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
54, 12
               

               
Conread position:
               
123-367
               

               
Cow position:
               
chr2:15571847-15571605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
97, 53
               

               
Conread position:
               
124-513
               

               
Cow position:
               
chr2:70945077-70945475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
48, 190
               

               
Conread position:
               
126-327
               

               
Cow position:
               
chr2:60093019-60092818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
92, 45
               

               
Conread position:
               
126-627
               

               
Cow position:
               
chr2:54789962-54790470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 94
               

               
Conread position:
               
127-622
               

               
Cow position:
               
chr2:44170238-44170740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 305
               

               
Conread position:
               
128-591
               

               
Cow position:
               
chr2:53430416-53430871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
39, 47
               

               
Conread position:
               
130-459
               

               
Cow position:
               
chr2:21284624-21284950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
87, 143
               

               
Conread position:
               
130-495
               

               
Cow position:
               
chr2:41528191-41528559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 98
               

               
Conread position:
               
130-627
               

               
Cow position:
               
chr2:77467769-77467271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
92, 46
               

               
Conread position:
               
130-628
               

               
Cow position:
               
chr2:65931658-65932157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
85, 41
               

               
Conread position:
               
130-638
               

               
Cow position:
               
chr2:22372259-22371756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 90
               

               
Conread position:
               
130-642
               

               
Cow position:
               
chr2:38965306-38965813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 114
               

               
Conread position:
               
130-649
               

               
Cow position:
               
chr2:37009103-37009619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
15, 155
               

               
Conread position:
               
130-652
               

               
Cow position:
               
chr2:47048065-47047540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
84, 41
               

               
Conread position:
               
130-654
               

               
Cow position:
               
chr2:31783629-31784144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
57, 44
               

               
Conread position:
               
130-655
               

               
Cow position:
               
chr2:35181082-35181612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 268
               

               
Conread position:
               
130-661
               

               
Cow position:
               
chr2:63250705-63250195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
46, 203
               

               
Conread position:
               
131-415
               

               
Cow position:
               
chr2:24709657-24709369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
39, 91
               

               
Conread position:
               
132-459
               

               
Cow position:
               
chr2:40313062-40313388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
94, 49
               

               
Conread position:
               
132-549
               

               
Cow position:
               
chr2:52170940-52171362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
90, 203
               

               
Conread position:
               
132-638
               

               
Cow position:
               
chr2:38662987-38662497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
90, 131
               

               
Conread position:
               
134-593
               

               
Cow position:
               
chr2:31499690-31500159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
38, 143
               

               
Conread position:
               
137-480
               

               
Cow position:
               
chr2:15568494-15568143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 7
               

               
Conread position:
               
137-572
               

               
Cow position:
               
chr2:46909755-46909299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
36, 224
               

               
Conread position:
               
138-670
               

               
Cow position:
               
chr2:66917029-66916479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
139-399
               

               
Cow position:
               
chr2:31672972-31673227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
191, 32
               

               
Conread position:
               
139-455
               

               
Cow position:
               
chr2:34571774-34571447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
139-628
               

               
Cow position:
               
chr2:69676841-69676339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
35, 84
               

               
Conread position:
               
140-358
               

               
Cow position:
               
chr2:6537639-6537420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
34, 100
               

               
Conread position:
               
140-509
               

               
Cow position:
               
chr2:33972134-33972511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
86, 331
               

               
Conread position:
               
144-293
               

               
Cow position:
               
chr2:41176421-41176570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
69, 27
               

               
Conread position:
               
144-513
               

               
Cow position:
               
chr2:40403319-40402956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
144-660
               

               
Cow position:
               
chr2:36136708-36137231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
27, 77
               

               
Conread position:
               
144-732
               

               
Cow position:
               
chr2:42607772-42608366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
78, 103
               

               
Conread position:
               
145-335
               

               
Cow position:
               
chr2:53000208-53000400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
28, 79
               

               
Conread position:
               
146-525
               

               
Cow position:
               
chr2:38206064-38205675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
146-628
               

               
Cow position:
               
chr2:57939386-57939875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 25
               

               
Conread position:
               
147-330
               

               
Cow position:
               
chr2:47105224-47105043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
147-362
               

               
Cow position:
               
chr2:37072517-37072732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
73, 24
               

               
Conread position:
               
147-366
               

               
Cow position:
               
chr2:44015760-44015978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
75, 24
               

               
Conread position:
               
147-367
               

               
Cow position:
               
chr2:45259371-45259161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
147-420
               

               
Cow position:
               
chr2:47066875-47066597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
74, 24
               

               
Conread position:
               
147-450
               

               
Cow position:
               
chr2:47784079-47784373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
68, 27
               

               
Conread position:
               
147-481
               

               
Cow position:
               
chr2:29612270-29612592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
75, 24
               

               
Conread position:
               
147-493
               

               
Cow position:
               
chr2:1365189-1364836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
147-493
               

               
Cow position:
               
chr2:39848352-39848698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
81, 24
               

               
Conread position:
               
147-538
               

               
Cow position:
               
chr2:49608296-49608687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
183, 24
               

               
Conread position:
               
147-561
               

               
Cow position:
               
chr2:45936249-45935842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 55
               

               
Conread position:
               
147-563
               

               
Cow position:
               
chr2:70674442-70674849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
189, 24
               

               
Conread position:
               
147-564
               

               
Cow position:
               
chr2:35135678-35136075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
75, 24
               

               
Conread position:
               
147-627
               

               
Cow position:
               
chr2:15059358-15058874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 24
               

               
Conread position:
               
147-644
               

               
Cow position:
               
chr2:44167786-44168268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 69
               

               
Conread position:
               
148-299
               

               
Cow position:
               
chr2:49728555-49728403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
148-339
               

               
Cow position:
               
chr2:25144882-25145074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
148-367
               

               
Cow position:
               
chr2:1095611-1095820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
148-525
               

               
Cow position:
               
chr2:47008642-47008261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
23, 130
               

               
Conread position:
               
148-550
               

               
Cow position:
               
chr2:81927558-81927952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
41, 51
               

               
Conread position:
               
148-627
               

               
Cow position:
               
chr2:26439021-26438541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 98
               

               
Conread position:
               
149-432
               

               
Cow position:
               
chr2:9185777-9185486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
149-657
               

               
Cow position:
               
chr2:47090473-47090982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
24, 51
               

               
Conread position:
               
150-326
               

               
Cow position:
               
chr2:70708300-70708126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
150-328
               

               
Cow position:
               
chr2:36867057-36866886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
72, 24
               

               
Conread position:
               
150-370
               

               
Cow position:
               
chr2:44032822-44032612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
150-455
               

               
Cow position:
               
chr2:46184566-46184252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
59, 21
               

               
Conread position:
               
150-501
               

               
Cow position:
               
chr2:34694946-34695304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 21
               

               
Conread position:
               
150-509
               

               
Cow position:
               
chr2:34048427-34048068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
150-638
               

               
Cow position:
               
chr2:73095078-73094606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
21, 72
               

               
Conread position:
               
150-654
               

               
Cow position:
               
chr2:45462865-45462381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
127, 21
               

               
Conread position:
               
151-528
               

               
Cow position:
               
chr2:39941198-39941561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
204, 20
               

               
Conread position:
               
151-654
               

               
Cow position:
               
chr2:55278884-55278371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
183, 20
               

               
Conread position:
               
151-664
               

               
Cow position:
               
chr2:52332921-52332408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 20
               

               
Conread position:
               
151-669
               

               
Cow position:
               
chr2:80115816-80116333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
216, 20
               

               
Conread position:
               
152-366
               

               
Cow position:
               
chr2:28285820-28285609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
62, 19
               

               
Conread position:
               
152-449
               

               
Cow position:
               
chr2:47340044-47340345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
56, 19
               

               
Conread position:
               
152-611
               

               
Cow position:
               
chr2:45535178-45535637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
69, 132
               

               
Conread position:
               
152-677
               

               
Cow position:
               
chr2:40484831-40484268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
62, 140
               

               
Conread position:
               
153-331
               

               
Cow position:
               
chr2:13467410-13467579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 18
               

               
Conread position:
               
153-347
               

               
Cow position:
               
chr2:37120894-37121090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
153-395
               

               
Cow position:
               
chr2:64830565-64830802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
67, 62
               

               
Conread position:
               
153-482
               

               
Cow position:
               
chr2:78300399-78300068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 151
               

               
Conread position:
               
154-631
               

               
Cow position:
               
chr2:39815575-39815104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 68
               

               
Conread position:
               
155-315
               

               
Cow position:
               
chr2:67724412-67724253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
155-424
               

               
Cow position:
               
chr2:831462-831731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 16
               

               
Conread position:
               
155-424
               

               
Cow position:
               
chr2:31401734-31401463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
54, 16
               

               
Conread position:
               
155-452
               

               
Cow position:
               
chr2:8295547-8295832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
65, 16
               

               
Conread position:
               
155-453
               

               
Cow position:
               
chr2:32357686-32357991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 16
               

               
Conread position:
               
155-509
               

               
Cow position:
               
chr2:53533094-53532745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 19
               

               
Conread position:
               
155-511
               

               
Cow position:
               
chr2:16514502-16514846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
47, 16
               

               
Conread position:
               
155-582
               

               
Cow position:
               
chr2:52409559-52409148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 87
               

               
Conread position:
               
155-619
               

               
Cow position:
               
chr2:36575446-36575915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
92, 16
               

               
Conread position:
               
155-627
               

               
Cow position:
               
chr2:22026-21567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
65, 16
               

               
Conread position:
               
155-654
               

               
Cow position:
               
chr2:19212330-19211846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
155-655
               

               
Cow position:
               
chr2:38886938-38886427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
63, 16
               

               
Conread position:
               
155-659
               

               
Cow position:
               
chr2:46189378-46188878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 64
               

               
Conread position:
               
155-662
               

               
Cow position:
               
chr2:36963247-36963747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
155-662
               

               
Cow position:
               
chr2:41147589-41148097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
175, 19
               

               
Conread position:
               
156-394
               

               
Cow position:
               
chr2:45917162-45916915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
55, 195
               

               
Conread position:
               
156-509
               

               
Cow position:
               
chr2:66140688-66140332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 65
               

               
Conread position:
               
156-627
               

               
Cow position:
               
chr2:24007149-24007604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
212, 60
               

               
Conread position:
               
156-652
               

               
Cow position:
               
chr2:57776062-57776567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 144
               

               
Conread position:
               
157-326
               

               
Cow position:
               
chr2:55498237-55498066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
157-328
               

               
Cow position:
               
chr2:85067407-85067238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
157-449
               

               
Cow position:
               
chr2:3173890-3174186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 14
               

               
Conread position:
               
158-323
               

               
Cow position:
               
chr2:52318247-52318088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
158-328
               

               
Cow position:
               
chr2:43105073-43105246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
14, 65
               

               
Conread position:
               
158-350
               

               
Cow position:
               
chr2:52177864-52177674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
158-554
               

               
Cow position:
               
chr2:39584168-39584559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 29
               

               
Conread position:
               
158-644
               

               
Cow position:
               
chr2:51638259-51638738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
159-328
               

               
Cow position:
               
chr2:304636-304472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
55, 12
               

               
Conread position:
               
159-328
               

               
Cow position:
               
chr2:44222336-44222496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
159-328
               

               
Cow position:
               
chr2:77969135-77968967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
159-393
               

               
Cow position:
               
chr2:6883944-6884175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
159-412
               

               
Cow position:
               
chr2:62225899-62226147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
59, 12
               

               
Conread position:
               
159-416
               

               
Cow position:
               
chr2:47877696-47877949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
159-424
               

               
Cow position:
               
chr2:63067404-63067129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 248
               

               
Conread position:
               
159-425
               

               
Cow position:
               
chr2:85458954-85459222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
53, 114
               

               
Conread position:
               
159-449
               

               
Cow position:
               
chr2:47181267-47180973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
159-470
               

               
Cow position:
               
chr2:62125372-62125689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
159-479
               

               
Cow position:
               
chr2:37921061-37920748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 12
               

               
Conread position:
               
159-595
               

               
Cow position:
               
chr2:34591821-34591391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 12
               

               
Conread position:
               
159-664
               

               
Cow position:
               
chr2:43473907-43474402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
160-320
               

               
Cow position:
               
chr2:22856702-22856861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
110, 55
               

               
Conread position:
               
160-323
               

               
Cow position:
               
chr2:43978183-43978019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
160-330
               

               
Cow position:
               
chr2:45470563-45470726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
160-353
               

               
Cow position:
               
chr2:30910141-30910334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
54, 60
               

               
Conread position:
               
160-619
               

               
Cow position:
               
chr2:17940569-17940105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 59
               

               
Conread position:
               
161-328
               

               
Cow position:
               
chr2:5162779-5162615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
161-416
               

               
Cow position:
               
chr2:68084233-68084487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
61, 10
               

               
Conread position:
               
161-657
               

               
Cow position:
               
chr2:81791858-81791350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
175, 249
               

               
Conread position:
               
162-282
               

               
Cow position:
               
chr2:46193047-46192926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
162-291
               

               
Cow position:
               
chr2:41311707-41311577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
162-308
               

               
Cow position:
               
chr2:82055413-82055268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
162-310
               

               
Cow position:
               
chr2:21171118-21171262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
162-310
               

               
Cow position:
               
chr2:27179853-27179994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
162-312
               

               
Cow position:
               
chr2:33649029-33648879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
162-319
               

               
Cow position:
               
chr2:5981035-5981188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 12
               

               
Conread position:
               
162-326
               

               
Cow position:
               
chr2:30150594-30150430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-326
               

               
Cow position:
               
chr2:40456182-40456018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-326
               

               
Cow position:
               
chr2:54740959-54741123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-327
               

               
Cow position:
               
chr2:32401318-32401479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
162-328
               

               
Cow position:
               
chr2:10295819-10295982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
14, 122
               

               
Conread position:
               
162-328
               

               
Cow position:
               
chr2:32454960-32454792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
162-328
               

               
Cow position:
               
chr2:70775846-70775680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
162-330
               

               
Cow position:
               
chr2:2485668-2485499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 59
               

               
Conread position:
               
162-331
               

               
Cow position:
               
chr2:47766342-47766175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-335
               

               
Cow position:
               
chr2:21042575-21042748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
67, 9
               

               
Conread position:
               
162-343
               

               
Cow position:
               
chr2:36318658-36318486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
162-347
               

               
Cow position:
               
chr2:49463687-49463871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
162-350
               

               
Cow position:
               
chr2:34899031-34899220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-350
               

               
Cow position:
               
chr2:45393875-45394064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-350
               

               
Cow position:
               
chr2:82898953-82899142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-350
               

               
Cow position:
               
chr2:86506949-86506760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-351
               

               
Cow position:
               
chr2:10981995-10981807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
67, 25
               

               
Conread position:
               
162-365
               

               
Cow position:
               
chr2:64473918-64473718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
162-366
               

               
Cow position:
               
chr2:13543748-13543945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
162-366
               

               
Cow position:
               
chr2:62761727-62761518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
162-366
               

               
Cow position:
               
chr2:73985301-73985096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
162-366
               

               
Cow position:
               
chr2:74031268-74031063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
162-366
               

               
Cow position:
               
chr2:77970423-77970219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
162-367
               

               
Cow position:
               
chr2:14884003-14884205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
162-367
               

               
Cow position:
               
chr2:41710601-41710797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
162-367
               

               
Cow position:
               
chr2:49344435-49344634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
162-370
               

               
Cow position:
               
chr2:73466794-73466589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
49, 9
               

               
Conread position:
               
162-377
               

               
Cow position:
               
chr2:28637562-28637349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-394
               

               
Cow position:
               
chr2:8505537-8505770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-394
               

               
Cow position:
               
chr2:35980970-35980733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-394
               

               
Cow position:
               
chr2:80161536-80161299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-395
               

               
Cow position:
               
chr2:16692876-16693108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
49, 9
               

               
Conread position:
               
162-395
               

               
Cow position:
               
chr2:35882611-35882380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 54
               

               
Conread position:
               
162-395
               

               
Cow position:
               
chr2:69581788-69581552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
162-399
               

               
Cow position:
               
chr2:840879-841122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-405
               

               
Cow position:
               
chr2:43773855-43773613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
162-414
               

               
Cow position:
               
chr2:65604207-65603955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-420
               

               
Cow position:
               
chr2:14955612-14955874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
162-420
               

               
Cow position:
               
chr2:25049085-25049347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-420
               

               
Cow position:
               
chr2:31382457-31382714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
162-420
               

               
Cow position:
               
chr2:57516970-57517232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-420
               

               
Cow position:
               
chr2:76969458-76969200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
162-423
               

               
Cow position:
               
chr2:9955748-9955483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-423
               

               
Cow position:
               
chr2:13342260-13341999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
47, 12
               

               
Conread position:
               
162-424
               

               
Cow position:
               
chr2:25992717-25992983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-424
               

               
Cow position:
               
chr2:40717943-40718210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-424
               

               
Cow position:
               
chr2:57707059-57707325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-425
               

               
Cow position:
               
chr2:12762628-12762367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-431
               

               
Cow position:
               
chr2:23794051-23793778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-432
               

               
Cow position:
               
chr2:14172630-14172904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-432
               

               
Cow position:
               
chr2:52139810-52140084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-432
               

               
Cow position:
               
chr2:67635573-67635844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-432
               

               
Cow position:
               
chr2:74446384-74446658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-435
               

               
Cow position:
               
chr2:27613306-27613025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
162-439
               

               
Cow position:
               
chr2:12736356-12736087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
168, 12
               

               
Conread position:
               
162-441
               

               
Cow position:
               
chr2:39597018-39597296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
14, 29
               

               
Conread position:
               
162-448
               

               
Cow position:
               
chr2:58465526-58465237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr2:1063616-1063907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr2:5317668-5317377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr2:5598258-5598549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr2:6529253-6529544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr2:6594193-6594479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
168, 12
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr2:11558481-11558190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr2:18349914-18349623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr2:27384701-27384410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr2:28848056-28848347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr2:31742842-31742553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr2:32078496-32078205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr2:32219336-32219626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr2:41723367-41723657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr2:44680962-44680671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr2:62663653-62663944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr2:62999287-62998996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr2:64699067-64699359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr2:68869170-68868879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr2:73188086-73188377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr2:76358543-76358831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr2:82696733-82697023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr2:84186639-84186930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr2:86497409-86497700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-452
               

               
Cow position:
               
chr2:11813065-11812774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-452
               

               
Cow position:
               
chr2:15653590-15653303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
56, 12
               

               
Conread position:
               
162-452
               

               
Cow position:
               
chr2:63274240-63273934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
162-452
               

               
Cow position:
               
chr2:78766202-78766492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-452
               

               
Cow position:
               
chr2:82656392-82656679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr2:4029318-4029614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr2:6638056-6637760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr2:7629203-7628907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr2:8707122-8706826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr2:11726857-11727153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr2:11857255-11857551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr2:12287881-12288177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr2:15970965-15971259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr2:18324047-18323751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr2:19378919-19379215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr2:22838282-22838578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr2:31562352-31562055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr2:34889208-34888912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr2:42803267-42802971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr2:43260177-43259881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr2:49461903-49462199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr2:65801345-65801641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-455
               

               
Cow position:
               
chr2:306126-305836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
162-455
               

               
Cow position:
               
chr2:28480395-28480106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
162-455
               

               
Cow position:
               
chr2:52386202-52385903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
47, 59
               

               
Conread position:
               
162-455
               

               
Cow position:
               
chr2:56102746-56102441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
162-458
               

               
Cow position:
               
chr2:36472991-36473291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-459
               

               
Cow position:
               
chr2:7721184-7720892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
162-459
               

               
Cow position:
               
chr2:41445459-41445760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-466
               

               
Cow position:
               
chr2:27600825-27600520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
162-469
               

               
Cow position:
               
chr2:26259779-26259469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-469
               

               
Cow position:
               
chr2:31299610-31299921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-469
               

               
Cow position:
               
chr2:31567838-31568149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-469
               

               
Cow position:
               
chr2:48722217-48722528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-469
               

               
Cow position:
               
chr2:84443462-84443773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr2:6070365-6070053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr2:7433133-7433445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr2:8230358-8230670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr2:20871213-20870901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr2:26129355-26129043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
46, 14
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr2:40247951-40247637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr2:41534033-41534345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr2:41798287-41798599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr2:48717490-48717801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr2:50612940-50613252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr2:55163819-55163508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr2:58572058-58572370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr2:72713802-72713490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-471
               

               
Cow position:
               
chr2:4848966-4849279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-471
               

               
Cow position:
               
chr2:15660057-15659744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-471
               

               
Cow position:
               
chr2:15884390-15884077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-471
               

               
Cow position:
               
chr2:46799168-46799481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
65, 9
               

               
Conread position:
               
162-471
               

               
Cow position:
               
chr2:46912624-46912937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
65, 9
               

               
Conread position:
               
162-471
               

               
Cow position:
               
chr2:48887179-48886865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-471
               

               
Cow position:
               
chr2:49911100-49911413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-471
               

               
Cow position:
               
chr2:58821703-58821390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-472
               

               
Cow position:
               
chr2:32286128-32285817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
162-473
               

               
Cow position:
               
chr2:12694187-12693871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
162-473
               

               
Cow position:
               
chr2:50061387-50061702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr2:15262731-15263047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr2:16171789-16171472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr2:17264950-17264634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr2:21662201-21662517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr2:22198842-22199159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr2:29105969-29105652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr2:38232883-38233199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr2:49121996-49122312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr2:53543423-53543736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr2:54848787-54848471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr2:57587657-57587974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-476
               

               
Cow position:
               
chr2:66962226-66961908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 14
               

               
Conread position:
               
162-477
               

               
Cow position:
               
chr2:38691606-38691287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-479
               

               
Cow position:
               
chr2:3669541-3669863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
162-479
               

               
Cow position:
               
chr2:6314134-6313816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
162-479
               

               
Cow position:
               
chr2:9040357-9040678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-479
               

               
Cow position:
               
chr2:22345498-22345819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-479
               

               
Cow position:
               
chr2:33492360-33492039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-479
               

               
Cow position:
               
chr2:42363071-42362750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
162-479
               

               
Cow position:
               
chr2:52806940-52807261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-479
               

               
Cow position:
               
chr2:62898863-62899182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-479
               

               
Cow position:
               
chr2:63706664-63706343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-486
               

               
Cow position:
               
chr2:26219653-26219975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
155, 14
               

               
Conread position:
               
162-492
               

               
Cow position:
               
chr2:2059668-2060009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
162-492
               

               
Cow position:
               
chr2:23493254-23493585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-492
               

               
Cow position:
               
chr2:64533062-64533385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
162-499
               

               
Cow position:
               
chr2:11806039-11806376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
162-501
               

               
Cow position:
               
chr2:39662418-39662764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
162-501
               

               
Cow position:
               
chr2:75561557-75561898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
47, 12
               

               
Conread position:
               
162-507
               

               
Cow position:
               
chr2:70579994-70579638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
162-509
               

               
Cow position:
               
chr2:6372281-6371930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
162-509
               

               
Cow position:
               
chr2:39280912-39281262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
162-509
               

               
Cow position:
               
chr2:66217820-66217476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
162-510
               

               
Cow position:
               
chr2:21416034-21416365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
49, 14
               

               
Conread position:
               
162-512
               

               
Cow position:
               
chr2:7524416-7524062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
162-513
               

               
Cow position:
               
chr2:6539517-6539167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 14
               

               
Conread position:
               
162-513
               

               
Cow position:
               
chr2:14089500-14089864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 12
               

               
Conread position:
               
162-513
               

               
Cow position:
               
chr2:33262896-33262545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
49, 9
               

               
Conread position:
               
162-514
               

               
Cow position:
               
chr2:4254816-4254463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
162-516
               

               
Cow position:
               
chr2:29268784-29269146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-523
               

               
Cow position:
               
chr2:988411-988767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 9
               

               
Conread position:
               
162-523
               

               
Cow position:
               
chr2:39263212-39263568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
162-525
               

               
Cow position:
               
chr2:38273264-38273633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-551
               

               
Cow position:
               
chr2:42255151-42255540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 9
               

               
Conread position:
               
162-551
               

               
Cow position:
               
chr2:70895749-70896140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
162-563
               

               
Cow position:
               
chr2:81388410-81388816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
162-564
               

               
Cow position:
               
chr2:45912918-45912513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-582
               

               
Cow position:
               
chr2:56846472-56846894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
162-594
               

               
Cow position:
               
chr2:23121037-23120615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
47, 12
               

               
Conread position:
               
162-600
               

               
Cow position:
               
chr2:20900749-20900298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
162-622
               

               
Cow position:
               
chr2:77157634-77157164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 12
               

               
Conread position:
               
162-627
               

               
Cow position:
               
chr2:25282826-25283301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 9
               

               
Conread position:
               
162-627
               

               
Cow position:
               
chr2:32114785-32115250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
162-627
               

               
Cow position:
               
chr2:43624807-43624352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
162-627
               

               
Cow position:
               
chr2:54654899-54654426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
162-627
               

               
Cow position:
               
chr2:80242469-80241996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
162-628
               

               
Cow position:
               
chr2:64212838-64212364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 9
               

               
Conread position:
               
162-641
               

               
Cow position:
               
chr2:16513575-16514057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 9
               

               
Conread position:
               
162-642
               

               
Cow position:
               
chr2:12950447-12949961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
162-644
               

               
Cow position:
               
chr2:9062990-9063472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
162-645
               

               
Cow position:
               
chr2:44065312-44065770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
162-647
               

               
Cow position:
               
chr2:70908595-70908125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
138, 9
               

               
Conread position:
               
162-654
               

               
Cow position:
               
chr2:13579963-13580450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
162-654
               

               
Cow position:
               
chr2:45478872-45478387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-654
               

               
Cow position:
               
chr2:46312171-46312648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
44, 9
               

               
Conread position:
               
162-655
               

               
Cow position:
               
chr2:56351196-56350696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 12
               

               
Conread position:
               
162-656
               

               
Cow position:
               
chr2:42969815-42970326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
91, 9
               

               
Conread position:
               
162-656
               

               
Cow position:
               
chr2:43994654-43995147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
162-657
               

               
Cow position:
               
chr2:54700169-54700670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
162-658
               

               
Cow position:
               
chr2:14826004-14826498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
162-660
               

               
Cow position:
               
chr2:9767704-9767209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
162-660
               

               
Cow position:
               
chr2:33497484-33496980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-660
               

               
Cow position:
               
chr2:46379367-46378889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
162-662
               

               
Cow position:
               
chr2:41451948-41452453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
162-663
               

               
Cow position:
               
chr2:53649746-53650235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 9
               

               
Conread position:
               
162-664
               

               
Cow position:
               
chr2:56828848-56828337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
162-667
               

               
Cow position:
               
chr2:76561831-76562350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
56, 124
               

               
Conread position:
               
162-674
               

               
Cow position:
               
chr2:33402769-33402246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
162-723
               

               
Cow position:
               
chr2:39589975-39590537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
14, 29
               

               
Conread position:
               
163-291
               

               
Cow position:
               
chr2:6951930-6952059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
163-315
               

               
Cow position:
               
chr2:40380703-40380552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 8
               

               
Conread position:
               
163-325
               

               
Cow position:
               
chr2:4796485-4796646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
60, 101
               

               
Conread position:
               
163-328
               

               
Cow position:
               
chr2:852159-851993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
57, 44
               

               
Conread position:
               
163-328
               

               
Cow position:
               
chr2:17800241-17800402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
163-328
               

               
Cow position:
               
chr2:21704190-21704025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
136, 56
               

               
Conread position:
               
163-328
               

               
Cow position:
               
chr2:36997874-36998042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
39, 8
               

               
Conread position:
               
163-366
               

               
Cow position:
               
chr2:42384124-42384325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
47, 78
               

               
Conread position:
               
163-367
               

               
Cow position:
               
chr2:20856103-20855906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
57, 45
               

               
Conread position:
               
163-367
               

               
Cow position:
               
chr2:46171154-46170954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
52, 57
               

               
Conread position:
               
163-367
               

               
Cow position:
               
chr2:53574829-53575025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
163-373
               

               
Cow position:
               
chr2:32244064-32243856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
55, 71
               

               
Conread position:
               
163-395
               

               
Cow position:
               
chr2:82610221-82609988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
45, 58
               

               
Conread position:
               
163-413
               

               
Cow position:
               
chr2:62239314-62239579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
105, 227
               

               
Conread position:
               
163-414
               

               
Cow position:
               
chr2:24435305-24435050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
55, 8
               

               
Conread position:
               
163-433
               

               
Cow position:
               
chr2:48069682-48069407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 250
               

               
Conread position:
               
163-452
               

               
Cow position:
               
chr2:39385142-39384864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
51, 8
               

               
Conread position:
               
163-455
               

               
Cow position:
               
chr2:6012984-6012689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
55, 238
               

               
Conread position:
               
163-455
               

               
Cow position:
               
chr2:40691208-40691499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
51, 57
               

               
Conread position:
               
163-457
               

               
Cow position:
               
chr2:45353661-45353362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 66
               

               
Conread position:
               
163-457
               

               
Cow position:
               
chr2:46362543-46362840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
51, 58
               

               
Conread position:
               
163-465
               

               
Cow position:
               
chr2:60470902-60471213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
163-474
               

               
Cow position:
               
chr2:44094845-44095161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 66
               

               
Conread position:
               
163-480
               

               
Cow position:
               
chr2:69237994-69238317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
59, 8
               

               
Conread position:
               
163-483
               

               
Cow position:
               
chr2:47361800-47361481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
187, 53
               

               
Conread position:
               
163-504
               

               
Cow position:
               
chr2:45518120-45518466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
57, 222
               

               
Conread position:
               
163-508
               

               
Cow position:
               
chr2:68110022-68109675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
47, 8
               

               
Conread position:
               
163-509
               

               
Cow position:
               
chr2:45784456-45784806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
199, 53
               

               
Conread position:
               
163-513
               

               
Cow position:
               
chr2:276420-276747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
76, 8
               

               
Conread position:
               
163-513
               

               
Cow position:
               
chr2:22254441-22254108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
55, 8
               

               
Conread position:
               
163-513
               

               
Cow position:
               
chr2:80325127-80324776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
163-518
               

               
Cow position:
               
chr2:11734233-11734599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
119, 8
               

               
Conread position:
               
163-551
               

               
Cow position:
               
chr2:68488288-68487901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 8
               

               
Conread position:
               
163-572
               

               
Cow position:
               
chr2:74260179-74260593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 57
               

               
Conread position:
               
163-644
               

               
Cow position:
               
chr2:46227189-46227671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 8
               

               
Conread position:
               
163-652
               

               
Cow position:
               
chr2:59397339-59396838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 122
               

               
Conread position:
               
163-655
               

               
Cow position:
               
chr2:69250957-69250450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
13, 58
               

               
Conread position:
               
163-659
               

               
Cow position:
               
chr2:6038728-6039235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
59, 8
               

               
Conread position:
               
163-660
               

               
Cow position:
               
chr2:39566955-39566477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 8
               

               
Conread position:
               
163-660
               

               
Cow position:
               
chr2:45499477-45498981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 110
               

               
Conread position:
               
164-328
               

               
Cow position:
               
chr2:15686873-15687037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
62, 7
               

               
Conread position:
               
164-334
               

               
Cow position:
               
chr2:73279276-73279101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
164-340
               

               
Cow position:
               
chr2:68413820-68413648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
46, 10
               

               
Conread position:
               
164-495
               

               
Cow position:
               
chr2:4223542-4223215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
178, 27
               

               
Conread position:
               
164-499
               

               
Cow position:
               
chr2:50445615-50445959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
164-512
               

               
Cow position:
               
chr2:45623747-45624084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
58, 7
               

               
Conread position:
               
164-512
               

               
Cow position:
               
chr2:55632495-55632845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 161
               

               
Conread position:
               
164-519
               

               
Cow position:
               
chr2:35483735-35483370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
7, 42
               

               
Conread position:
               
164-656
               

               
Cow position:
               
chr2:38259731-38259236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
187, 60
               

               
Conread position:
               
165-311
               

               
Cow position:
               
chr2:28611370-28611221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 18
               

               
Conread position:
               
165-316
               

               
Cow position:
               
chr2:45896738-45896884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
7, 39
               

               
Conread position:
               
165-328
               

               
Cow position:
               
chr2:982497-982663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 77
               

               
Conread position:
               
165-328
               

               
Cow position:
               
chr2:19014800-19014966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
165-328
               

               
Cow position:
               
chr2:27145641-27145482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
49, 6
               

               
Conread position:
               
165-328
               

               
Cow position:
               
chr2:30960690-30960851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
49, 56
               

               
Conread position:
               
165-328
               

               
Cow position:
               
chr2:80288269-80288103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
165-365
               

               
Cow position:
               
chr2:61681311-61681513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
11, 92
               

               
Conread position:
               
165-367
               

               
Cow position:
               
chr2:21356132-21355929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 56
               

               
Conread position:
               
165-396
               

               
Cow position:
               
chr2:85739850-85740071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
53, 6
               

               
Conread position:
               
165-412
               

               
Cow position:
               
chr2:84997036-84997291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
8, 57
               

               
Conread position:
               
165-421
               

               
Cow position:
               
chr2:36984135-36984395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 208
               

               
Conread position:
               
165-421
               

               
Cow position:
               
chr2:44476005-44475748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 235
               

               
Conread position:
               
165-455
               

               
Cow position:
               
chr2:12821849-12821583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
6, 52
               

               
Conread position:
               
165-455
               

               
Cow position:
               
chr2:36007853-36007573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
196, 6
               

               
Conread position:
               
165-494
               

               
Cow position:
               
chr2:32113252-32112914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
7, 81
               

               
Conread position:
               
165-501
               

               
Cow position:
               
chr2:47098213-47097884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
165-506
               

               
Cow position:
               
chr2:21714345-21714691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 86
               

               
Conread position:
               
165-506
               

               
Cow position:
               
chr2:56155908-56155562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
61, 263
               

               
Conread position:
               
165-509
               

               
Cow position:
               
chr2:8724003-8723656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
53, 6
               

               
Conread position:
               
165-509
               

               
Cow position:
               
chr2:9701275-9701624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
7, 207
               

               
Conread position:
               
165-509
               

               
Cow position:
               
chr2:30112735-30113088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
57, 6
               

               
Conread position:
               
165-509
               

               
Cow position:
               
chr2:30959614-30959969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
165-509
               

               
Cow position:
               
chr2:39078097-39078445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
44, 6
               

               
Conread position:
               
165-509
               

               
Cow position:
               
chr2:43644345-43644701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
7, 80
               

               
Conread position:
               
165-509
               

               
Cow position:
               
chr2:50277742-50278091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
8, 56
               

               
Conread position:
               
165-509
               

               
Cow position:
               
chr2:74236579-74236225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 246
               

               
Conread position:
               
165-510
               

               
Cow position:
               
chr2:42226550-42226194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 6
               

               
Conread position:
               
165-511
               

               
Cow position:
               
chr2:52344482-52344820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 57
               

               
Conread position:
               
165-512
               

               
Cow position:
               
chr2:46231046-46230693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
26, 6
               

               
Conread position:
               
165-514
               

               
Cow position:
               
chr2:43609370-43609046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
196, 54
               

               
Conread position:
               
165-549
               

               
Cow position:
               
chr2:9173539-9173168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
44, 110
               

               
Conread position:
               
165-563
               

               
Cow position:
               
chr2:46294315-46293925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
165-563
               

               
Cow position:
               
chr2:59953133-59952739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
58, 6
               

               
Conread position:
               
165-566
               

               
Cow position:
               
chr2:41184787-41185189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
6, 106
               

               
Conread position:
               
165-627
               

               
Cow position:
               
chr2:46201992-46202455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 8
               

               
Conread position:
               
165-627
               

               
Cow position:
               
chr2:76314135-76313678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
11, 52
               

               
Conread position:
               
165-655
               

               
Cow position:
               
chr2:971565-972034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
44, 56
               

               
Conread position:
               
165-657
               

               
Cow position:
               
chr2:36077068-36077577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
7, 51
               

               
Conread position:
               
165-657
               

               
Cow position:
               
chr2:71800371-71799861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
7, 58
               

               
Conread position:
               
165-673
               

               
Cow position:
               
chr2:7193925-7194436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
165-704
               

               
Cow position:
               
chr2:78744421-78744967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
7, 57
               

               
Conread position:
               
166-375
               

               
Cow position:
               
chr2:33659979-33659775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 92
               

               
Conread position:
               
166-425
               

               
Cow position:
               
chr2:74209600-74209355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
84, 43
               

               
Conread position:
               
166-432
               

               
Cow position:
               
chr2:64317103-64316831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
6, 81
               

               
Conread position:
               
166-617
               

               
Cow position:
               
chr2:13582307-13582762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 74
               

               
Conread position:
               
166-627
               

               
Cow position:
               
chr2:41019480-41019029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
201, 10
               

               
Conread position:
               
167-328
               

               
Cow position:
               
chr2:66563542-66563390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
47, 53
               

               
Conread position:
               
167-383
               

               
Cow position:
               
chr2:485343-485560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
41, 53
               

               
Conread position:
               
169-395
               

               
Cow position:
               
chr2:51644750-51644969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
51, 14
               

               
Conread position:
               
169-432
               

               
Cow position:
               
chr2:6003335-6003064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
5, 146
               

               
Conread position:
               
169-509
               

               
Cow position:
               
chr2:57932458-57932804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
159, 255
               

               
Conread position:
               
170-326
               

               
Cow position:
               
chr2:41162731-41162884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 24
               

               
Conread position:
               
170-328
               

               
Cow position:
               
chr2:8245281-8245435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
170-328
               

               
Cow position:
               
chr2:82270197-82270355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 50
               

               
Conread position:
               
170-336
               

               
Cow position:
               
chr2:44007022-44007188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
44, 50
               

               
Conread position:
               
170-352
               

               
Cow position:
               
chr2:78750264-78750447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 105
               

               
Conread position:
               
170-387
               

               
Cow position:
               
chr2:46734184-46734402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
52, 131
               

               
Conread position:
               
170-421
               

               
Cow position:
               
chr2:43596443-43596193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
44, 50
               

               
Conread position:
               
170-477
               

               
Cow position:
               
chr2:15815317-15815622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 180
               

               
Conread position:
               
170-477
               

               
Cow position:
               
chr2:55387276-55387578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 50
               

               
Conread position:
               
170-480
               

               
Cow position:
               
chr2:1211041-1210725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
170-507
               

               
Cow position:
               
chr2:36056070-36055734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 51
               

               
Conread position:
               
170-512
               

               
Cow position:
               
chr2:61485363-61485693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
226, 112
               

               
Conread position:
               
170-513
               

               
Cow position:
               
chr2:1352384-1352053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
51, 106
               

               
Conread position:
               
170-513
               

               
Cow position:
               
chr2:5297466-5297808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
170-513
               

               
Cow position:
               
chr2:70703981-70704329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 47
               

               
Conread position:
               
170-565
               

               
Cow position:
               
chr2:44482919-44482527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
52, 130
               

               
Conread position:
               
170-619
               

               
Cow position:
               
chr2:15298268-15298714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
99, 46
               

               
Conread position:
               
170-627
               

               
Cow position:
               
chr2:45575269-45574821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 121
               

               
Conread position:
               
170-642
               

               
Cow position:
               
chr2:71624649-71624194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
226, 45
               

               
Conread position:
               
170-644
               

               
Cow position:
               
chr2:81931734-81931254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 80
               

               
Conread position:
               
170-645
               

               
Cow position:
               
chr2:26501213-26500732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
170-660
               

               
Cow position:
               
chr2:28820091-28820591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
170-673
               

               
Cow position:
               
chr2:29343701-29343175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 252
               

               
Conread position:
               
171-424
               

               
Cow position:
               
chr2:56355121-56354872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 71
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr2:43123047-43123202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
27, 113
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr2:43718644-43718797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
172-622
               

               
Cow position:
               
chr2:31750240-31749784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 120
               

               
Conread position:
               
173-328
               

               
Cow position:
               
chr2:86533001-86533156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 90
               

               
Conread position:
               
173-353
               

               
Cow position:
               
chr2:1199357-1199175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 113
               

               
Conread position:
               
173-366
               

               
Cow position:
               
chr2:12979292-12979095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
173-395
               

               
Cow position:
               
chr2:48617708-48617935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
173-415
               

               
Cow position:
               
chr2:893974-893731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
51, 114
               

               
Conread position:
               
173-420
               

               
Cow position:
               
chr2:43742156-43742408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 229
               

               
Conread position:
               
173-432
               

               
Cow position:
               
chr2:3078935-3078671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-432
               

               
Cow position:
               
chr2:12424391-12424127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-448
               

               
Cow position:
               
chr2:84488376-84488656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-449
               

               
Cow position:
               
chr2:472443-472722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-449
               

               
Cow position:
               
chr2:5606884-5607165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-449
               

               
Cow position:
               
chr2:10167741-10168022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 207
               

               
Conread position:
               
173-452
               

               
Cow position:
               
chr2:57921381-57921099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
41, 54
               

               
Conread position:
               
173-454
               

               
Cow position:
               
chr2:12409087-12408801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-458
               

               
Cow position:
               
chr2:78832195-78831906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 55
               

               
Conread position:
               
173-469
               

               
Cow position:
               
chr2:28733305-28733606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-470
               

               
Cow position:
               
chr2:24626376-24626074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-470
               

               
Cow position:
               
chr2:34121057-34120755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-470
               

               
Cow position:
               
chr2:49849871-49850173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-471
               

               
Cow position:
               
chr2:24422536-24422232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-474
               

               
Cow position:
               
chr2:2832290-2831984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 233
               

               
Conread position:
               
173-474
               

               
Cow position:
               
chr2:39425305-39425611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-474
               

               
Cow position:
               
chr2:39593063-39593369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 67
               

               
Conread position:
               
173-479
               

               
Cow position:
               
chr2:3063061-3062750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
45, 229
               

               
Conread position:
               
173-480
               

               
Cow position:
               
chr2:46244296-46243980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
36, 48
               

               
Conread position:
               
173-482
               

               
Cow position:
               
chr2:70641130-70640816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
48, 157
               

               
Conread position:
               
173-509
               

               
Cow position:
               
chr2:70539646-70539305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
36, 48
               

               
Conread position:
               
173-511
               

               
Cow position:
               
chr2:47644783-47645115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 42
               

               
Conread position:
               
173-516
               

               
Cow position:
               
chr2:17680266-17680611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-625
               

               
Cow position:
               
chr2:35948937-35948495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 99
               

               
Conread position:
               
173-626
               

               
Cow position:
               
chr2:38659052-38658610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
41, 47
               

               
Conread position:
               
173-627
               

               
Cow position:
               
chr2:42800777-42801223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 43
               

               
Conread position:
               
173-627
               

               
Cow position:
               
chr2:71437654-71437189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 407
               

               
Conread position:
               
173-628
               

               
Cow position:
               
chr2:71921955-71922412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
26, 192
               

               
Conread position:
               
173-630
               

               
Cow position:
               
chr2:45619665-45619206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 48
               

               
Conread position:
               
173-659
               

               
Cow position:
               
chr2:65269964-65269471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
156, 32
               

               
Conread position:
               
173-664
               

               
Cow position:
               
chr2:31355437-31355923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
174-328
               

               
Cow position:
               
chr2:60427946-60427790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
49, 63
               

               
Conread position:
               
174-366
               

               
Cow position:
               
chr2:54253088-54253271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
174-436
               

               
Cow position:
               
chr2:60238028-60238288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
40, 46
               

               
Conread position:
               
174-509
               

               
Cow position:
               
chr2:21644722-21644384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
40, 47
               

               
Conread position:
               
174-644
               

               
Cow position:
               
chr2:82581200-82580731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 102
               

               
Conread position:
               
174-650
               

               
Cow position:
               
chr2:13001542-13002006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 42
               

               
Conread position:
               
174-653
               

               
Cow position:
               
chr2:65929108-65928625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
177, 77
               

               
Conread position:
               
175-320
               

               
Cow position:
               
chr2:14099379-14099521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
50, 55
               

               
Conread position:
               
175-328
               

               
Cow position:
               
chr2:6190049-6190197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
175-328
               

               
Cow position:
               
chr2:19618879-19618721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 132
               

               
Conread position:
               
175-329
               

               
Cow position:
               
chr2:68660519-68660674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
34, 112
               

               
Conread position:
               
175-350
               

               
Cow position:
               
chr2:56947046-56947224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 142
               

               
Conread position:
               
175-367
               

               
Cow position:
               
chr2:29717105-29716906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
39, 46
               

               
Conread position:
               
175-394
               

               
Cow position:
               
chr2:10485288-10485505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
45, 40
               

               
Conread position:
               
175-395
               

               
Cow position:
               
chr2:32406418-32406634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
186, 29
               

               
Conread position:
               
175-512
               

               
Cow position:
               
chr2:192727-192396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
190, 44
               

               
Conread position:
               
175-525
               

               
Cow position:
               
chr2:50580101-50580446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
39, 45
               

               
Conread position:
               
175-638
               

               
Cow position:
               
chr2:44986594-44986127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
39, 46
               

               
Conread position:
               
175-650
               

               
Cow position:
               
chr2:5300320-5300809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
175-653
               

               
Cow position:
               
chr2:30141111-30141592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
43, 226
               

               
Conread position:
               
175-654
               

               
Cow position:
               
chr2:33554428-33553965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 109
               

               
Conread position:
               
176-319
               

               
Cow position:
               
chr2:4008552-4008695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
32, 44
               

               
Conread position:
               
176-326
               

               
Cow position:
               
chr2:29291807-29291661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
176-328
               

               
Cow position:
               
chr2:62818983-62818832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
39, 49
               

               
Conread position:
               
176-335
               

               
Cow position:
               
chr2:40428070-40427911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
50, 119
               

               
Conread position:
               
176-335
               

               
Cow position:
               
chr2:76822520-76822361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 110
               

               
Conread position:
               
176-339
               

               
Cow position:
               
chr2:42292698-42292861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 6
               

               
Conread position:
               
176-351
               

               
Cow position:
               
chr2:66097956-66097780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
176-367
               

               
Cow position:
               
chr2:2688906-2689088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 44
               

               
Conread position:
               
176-367
               

               
Cow position:
               
chr2:42599662-42599853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
176-395
               

               
Cow position:
               
chr2:70746530-70746751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 45
               

               
Conread position:
               
176-414
               

               
Cow position:
               
chr2:29546266-29546023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
14, 164
               

               
Conread position:
               
176-417
               

               
Cow position:
               
chr2:11900163-11900404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
44, 39
               

               
Conread position:
               
176-438
               

               
Cow position:
               
chr2:46245705-46245436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 73
               

               
Conread position:
               
176-450
               

               
Cow position:
               
chr2:51824661-51824933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 44
               

               
Conread position:
               
176-452
               

               
Cow position:
               
chr2:45311394-45311107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
176-461
               

               
Cow position:
               
chr2:42938567-42938279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
198, 139
               

               
Conread position:
               
176-513
               

               
Cow position:
               
chr2:24434552-24434209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
117, 29
               

               
Conread position:
               
176-513
               

               
Cow position:
               
chr2:26102513-26102838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 45
               

               
Conread position:
               
176-518
               

               
Cow position:
               
chr2:18061897-18061552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 158
               

               
Conread position:
               
176-525
               

               
Cow position:
               
chr2:30816690-30817051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
154, 68
               

               
Conread position:
               
176-556
               

               
Cow position:
               
chr2:47624681-47624298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
54, 232
               

               
Conread position:
               
176-562
               

               
Cow position:
               
chr2:42927718-42927326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 45
               

               
Conread position:
               
176-600
               

               
Cow position:
               
chr2:296366-295924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 226
               

               
Conread position:
               
176-625
               

               
Cow position:
               
chr2:15674280-15674715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
38, 44
               

               
Conread position:
               
176-627
               

               
Cow position:
               
chr2:13369394-13369845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
42, 126
               

               
Conread position:
               
176-644
               

               
Cow position:
               
chr2:46344419-46344876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
8, 94
               

               
Conread position:
               
176-653
               

               
Cow position:
               
chr2:67479715-67480200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
179, 39
               

               
Conread position:
               
176-655
               

               
Cow position:
               
chr2:58074613-58074132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 6
               

               
Conread position:
               
176-657
               

               
Cow position:
               
chr2:80226-79741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 57
               

               
Conread position:
               
176-660
               

               
Cow position:
               
chr2:30639924-30640409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 44
               

               
Conread position:
               
176-665
               

               
Cow position:
               
chr2:27173100-27173588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 45
               

               
Conread position:
               
177-328
               

               
Cow position:
               
chr2:29734236-29734390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
177-395
               

               
Cow position:
               
chr2:66615186-66614959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
177-412
               

               
Cow position:
               
chr2:20980134-20980368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
32, 44
               

               
Conread position:
               
177-451
               

               
Cow position:
               
chr2:62978931-62978664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
46, 106
               

               
Conread position:
               
177-455
               

               
Cow position:
               
chr2:24469923-24469644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 44
               

               
Conread position:
               
177-478
               

               
Cow position:
               
chr2:29382939-29382643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
188, 78
               

               
Conread position:
               
177-480
               

               
Cow position:
               
chr2:1755771-1756079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
190, 39
               

               
Conread position:
               
177-480
               

               
Cow position:
               
chr2:77241590-77241903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
177-525
               

               
Cow position:
               
chr2:32417123-32416777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 44
               

               
Conread position:
               
177-564
               

               
Cow position:
               
chr2:30642937-30642536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
177-665
               

               
Cow position:
               
chr2:7534043-7533555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 240
               

               
Conread position:
               
177-672
               

               
Cow position:
               
chr2:67596281-67595781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
178-326
               

               
Cow position:
               
chr2:65050771-65050913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
178-328
               

               
Cow position:
               
chr2:73069452-73069604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 86
               

               
Conread position:
               
178-395
               

               
Cow position:
               
chr2:68876873-68877086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
43, 81
               

               
Conread position:
               
178-501
               

               
Cow position:
               
chr2:51594500-51594824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
37, 123
               

               
Conread position:
               
178-661
               

               
Cow position:
               
chr2:27178393-27178869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
152, 38
               

               
Conread position:
               
179-317
               

               
Cow position:
               
chr2:31119751-31119890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
179-334
               

               
Cow position:
               
chr2:23078228-23078074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 123
               

               
Conread position:
               
179-339
               

               
Cow position:
               
chr2:86100612-86100773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 42
               

               
Conread position:
               
179-420
               

               
Cow position:
               
chr2:4179644-4179400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 50
               

               
Conread position:
               
179-459
               

               
Cow position:
               
chr2:38628643-38628926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
7, 44
               

               
Conread position:
               
179-480
               

               
Cow position:
               
chr2:59906292-59906004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
152, 78
               

               
Conread position:
               
179-499
               

               
Cow position:
               
chr2:61974530-61974854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 230
               

               
Conread position:
               
179-525
               

               
Cow position:
               
chr2:31457224-31457576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
179-600
               

               
Cow position:
               
chr2:39500768-39501198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
35, 41
               

               
Conread position:
               
179-638
               

               
Cow position:
               
chr2:68190900-68190448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
35, 41
               

               
Conread position:
               
179-663
               

               
Cow position:
               
chr2:32264660-32264175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
180-335
               

               
Cow position:
               
chr2:4670538-4670694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
34, 40
               

               
Conread position:
               
181-525
               

               
Cow position:
               
chr2:11696868-11697209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
34, 106
               

               
Conread position:
               
181-638
               

               
Cow position:
               
chr2:67301774-67302217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
182-319
               

               
Cow position:
               
chr2:42394168-42394305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
182-328
               

               
Cow position:
               
chr2:34646913-34647056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 39
               

               
Conread position:
               
182-328
               

               
Cow position:
               
chr2:58310433-58310577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 39
               

               
Conread position:
               
182-330
               

               
Cow position:
               
chr2:23640225-23640373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 91
               

               
Conread position:
               
182-360
               

               
Cow position:
               
chr2:25283549-25283729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
182-360
               

               
Cow position:
               
chr2:25285293-25285473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
182-366
               

               
Cow position:
               
chr2:53658255-53658071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
182-373
               

               
Cow position:
               
chr2:39663133-39663326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 180
               

               
Conread position:
               
182-417
               

               
Cow position:
               
chr2:45554059-45554291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
168, 37
               

               
Conread position:
               
182-426
               

               
Cow position:
               
chr2:41525978-41525739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
152, 25
               

               
Conread position:
               
182-476
               

               
Cow position:
               
chr2:45469743-45470041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
36, 115
               

               
Conread position:
               
182-512
               

               
Cow position:
               
chr2:41954618-41954956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
101, 33
               

               
Conread position:
               
182-513
               

               
Cow position:
               
chr2:47116174-47115848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
36, 110
               

               
Conread position:
               
182-518
               

               
Cow position:
               
chr2:6055706-6056044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 189
               

               
Conread position:
               
182-561
               

               
Cow position:
               
chr2:1073270-1073643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
40, 99
               

               
Conread position:
               
182-627
               

               
Cow position:
               
chr2:35092949-35092519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
32, 38
               

               
Conread position:
               
182-642
               

               
Cow position:
               
chr2:19493952-19494417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 94
               

               
Conread position:
               
182-659
               

               
Cow position:
               
chr2:41248307-41248782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 39
               

               
Conread position:
               
182-659
               

               
Cow position:
               
chr2:82957414-82957898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
148, 65
               

               
Conread position:
               
182-660
               

               
Cow position:
               
chr2:46262183-46262661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 163
               

               
Conread position:
               
182-689
               

               
Cow position:
               
chr2:32431984-32431489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
32, 94
               

               
Conread position:
               
183-326
               

               
Cow position:
               
chr2:6720596-6720740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
183-330
               

               
Cow position:
               
chr2:31264746-31264602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
37, 100
               

               
Conread position:
               
183-335
               

               
Cow position:
               
chr2:14749335-14749484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
183-335
               

               
Cow position:
               
chr2:40492109-40492260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
183-336
               

               
Cow position:
               
chr2:53501517-53501372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
183-365
               

               
Cow position:
               
chr2:18636633-18636818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
183-366
               

               
Cow position:
               
chr2:37113458-37113284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
147, 90
               

               
Conread position:
               
183-370
               

               
Cow position:
               
chr2:36044615-36044419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
183-410
               

               
Cow position:
               
chr2:79403847-79404071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
147, 38
               

               
Conread position:
               
183-411
               

               
Cow position:
               
chr2:71495128-71495361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 38
               

               
Conread position:
               
183-415
               

               
Cow position:
               
chr2:85246592-85246354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
37, 103
               

               
Conread position:
               
183-417
               

               
Cow position:
               
chr2:50606289-50606522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
35, 97
               

               
Conread position:
               
183-422
               

               
Cow position:
               
chr2:818325-818568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
166, 33
               

               
Conread position:
               
183-438
               

               
Cow position:
               
chr2:16422294-16422551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 40
               

               
Conread position:
               
183-449
               

               
Cow position:
               
chr2:62685376-62685648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 100
               

               
Conread position:
               
183-461
               

               
Cow position:
               
chr2:63865592-63865306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
35, 254
               

               
Conread position:
               
183-462
               

               
Cow position:
               
chr2:47138577-47138860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 225
               

               
Conread position:
               
183-472
               

               
Cow position:
               
chr2:77377976-77378275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
39, 248
               

               
Conread position:
               
183-479
               

               
Cow position:
               
chr2:22125557-22125243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
183-516
               

               
Cow position:
               
chr2:1300639-1300321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
183-519
               

               
Cow position:
               
chr2:15693970-15694282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
183-523
               

               
Cow position:
               
chr2:4384152-4383816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
31, 42
               

               
Conread position:
               
183-607
               

               
Cow position:
               
chr2:50766228-50766644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
39, 169
               

               
Conread position:
               
183-622
               

               
Cow position:
               
chr2:10320215-10319768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
20, 58
               

               
Conread position:
               
183-627
               

               
Cow position:
               
chr2:29802368-29801957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
37, 52
               

               
Conread position:
               
183-645
               

               
Cow position:
               
chr2:39068049-39068485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
117, 31
               

               
Conread position:
               
183-649
               

               
Cow position:
               
chr2:2673265-2673739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 32
               

               
Conread position:
               
183-656
               

               
Cow position:
               
chr2:13354415-13354898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
183-656
               

               
Cow position:
               
chr2:85281377-85280931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
39, 55
               

               
Conread position:
               
183-657
               

               
Cow position:
               
chr2:6356647-6356148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
26, 40
               

               
Conread position:
               
183-660
               

               
Cow position:
               
chr2:14710366-14709905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
39, 118
               

               
Conread position:
               
183-660
               

               
Cow position:
               
chr2:41157703-41158177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
51, 125
               

               
Conread position:
               
183-664
               

               
Cow position:
               
chr2:42183111-42183595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 33
               

               
Conread position:
               
184-328
               

               
Cow position:
               
chr2:26318372-26318513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
34, 90
               

               
Conread position:
               
184-373
               

               
Cow position:
               
chr2:46058368-46058178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
184-565
               

               
Cow position:
               
chr2:17967292-17966901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
184-660
               

               
Cow position:
               
chr2:76110136-76110616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
38, 114
               

               
Conread position:
               
184-663
               

               
Cow position:
               
chr2:32048229-32048706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
38, 90
               

               
Conread position:
               
185-327
               

               
Cow position:
               
chr2:15216351-15216495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
185-383
               

               
Cow position:
               
chr2:69046782-69046977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
163, 30
               

               
Conread position:
               
185-422
               

               
Cow position:
               
chr2:2375-2146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
211, 34
               

               
Conread position:
               
185-454
               

               
Cow position:
               
chr2:46995010-46994745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 34
               

               
Conread position:
               
185-455
               

               
Cow position:
               
chr2:55480496-55480225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 91
               

               
Conread position:
               
185-458
               

               
Cow position:
               
chr2:21407662-21407939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 101
               

               
Conread position:
               
185-500
               

               
Cow position:
               
chr2:57393553-57393234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
145, 30
               

               
Conread position:
               
185-501
               

               
Cow position:
               
chr2:75791574-75791254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
145, 227
               

               
Conread position:
               
185-504
               

               
Cow position:
               
chr2:36878476-36878156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 173
               

               
Conread position:
               
185-513
               

               
Cow position:
               
chr2:47072933-47073258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
35, 104
               

               
Conread position:
               
185-525
               

               
Cow position:
               
chr2:12237497-12237164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 36
               

               
Conread position:
               
185-626
               

               
Cow position:
               
chr2:43835821-43835373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
29, 35
               

               
Conread position:
               
185-644
               

               
Cow position:
               
chr2:51799579-51799133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
35, 30
               

               
Conread position:
               
185-647
               

               
Cow position:
               
chr2:27338032-27337571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
29, 35
               

               
Conread position:
               
185-652
               

               
Cow position:
               
chr2:13684448-13684903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 122
               

               
Conread position:
               
185-657
               

               
Cow position:
               
chr2:18621148-18621629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
185-660
               

               
Cow position:
               
chr2:49428128-49428604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 108
               

               
Conread position:
               
185-660
               

               
Cow position:
               
chr2:52485236-52484742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
186-328
               

               
Cow position:
               
chr2:24668899-24669042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
186-330
               

               
Cow position:
               
chr2:60461912-60462057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
186-366
               

               
Cow position:
               
chr2:80178020-80177841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
36, 97
               

               
Conread position:
               
186-443
               

               
Cow position:
               
chr2:42872010-42872275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
186-454
               

               
Cow position:
               
chr2:1658242-1658509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
186-471
               

               
Cow position:
               
chr2:63568115-63568395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
186-476
               

               
Cow position:
               
chr2:14556008-14555714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
36, 88
               

               
Conread position:
               
186-509
               

               
Cow position:
               
chr2:355581-355243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
186-659
               

               
Cow position:
               
chr2:62744264-62743789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 47
               

               
Conread position:
               
187-307
               

               
Cow position:
               
chr2:13830310-13830431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
187-328
               

               
Cow position:
               
chr2:46153462-46153328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
187-334
               

               
Cow position:
               
chr2:25928197-25928338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 62
               

               
Conread position:
               
187-366
               

               
Cow position:
               
chr2:80839386-80839211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
28, 46
               

               
Conread position:
               
187-367
               

               
Cow position:
               
chr2:41313633-41313814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
187-383
               

               
Cow position:
               
chr2:16632680-16632882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 28
               

               
Conread position:
               
187-395
               

               
Cow position:
               
chr2:52379432-52379226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
35, 150
               

               
Conread position:
               
187-455
               

               
Cow position:
               
chr2:80797419-80797678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 95
               

               
Conread position:
               
187-513
               

               
Cow position:
               
chr2:54789523-54789845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
26, 34
               

               
Conread position:
               
187-516
               

               
Cow position:
               
chr2:34535421-34535083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
22, 103
               

               
Conread position:
               
187-523
               

               
Cow position:
               
chr2:41461107-41461450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
187-600
               

               
Cow position:
               
chr2:54970932-54971338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
208, 29
               

               
Conread position:
               
187-638
               

               
Cow position:
               
chr2:66959419-66959877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
187-653
               

               
Cow position:
               
chr2:16594351-16594819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
33, 28
               

               
Conread position:
               
187-655
               

               
Cow position:
               
chr2:55527018-55526559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
187-656
               

               
Cow position:
               
chr2:84480776-84480282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 34
               

               
Conread position:
               
188-330
               

               
Cow position:
               
chr2:60467291-60467441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
188-335
               

               
Cow position:
               
chr2:40836418-40836270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
188-335
               

               
Cow position:
               
chr2:70752536-70752685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
188-347
               

               
Cow position:
               
chr2:36468104-36468264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
24, 33
               

               
Conread position:
               
188-417
               

               
Cow position:
               
chr2:68843204-68842966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
188-459
               

               
Cow position:
               
chr2:42309809-42309534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
27, 69
               

               
Conread position:
               
188-489
               

               
Cow position:
               
chr2:28118246-28118548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 33
               

               
Conread position:
               
188-516
               

               
Cow position:
               
chr2:36435946-36436281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
188-538
               

               
Cow position:
               
chr2:76340914-76340556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
188-572
               

               
Cow position:
               
chr2:36423759-36424156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 94
               

               
Conread position:
               
188-644
               

               
Cow position:
               
chr2:75600457-75600915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 32
               

               
Conread position:
               
188-649
               

               
Cow position:
               
chr2:24270972-24271424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
26, 32
               

               
Conread position:
               
188-659
               

               
Cow position:
               
chr2:21002932-21003385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 28
               

               
Conread position:
               
189-344
               

               
Cow position:
               
chr2:11840178-11840331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
141, 27
               

               
Conread position:
               
189-395
               

               
Cow position:
               
chr2:60956121-60956324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
164, 30
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr2:6912450-6912774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 155
               

               
Conread position:
               
189-516
               

               
Cow position:
               
chr2:45665779-45666107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 30
               

               
Conread position:
               
189-525
               

               
Cow position:
               
chr2:47990186-47990520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
189-565
               

               
Cow position:
               
chr2:17444540-17444915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
32, 99
               

               
Conread position:
               
189-565
               

               
Cow position:
               
chr2:19287331-19286953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 87
               

               
Conread position:
               
189-634
               

               
Cow position:
               
chr2:37347546-37347979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 89
               

               
Conread position:
               
189-644
               

               
Cow position:
               
chr2:777943-777479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
141, 30
               

               
Conread position:
               
189-651
               

               
Cow position:
               
chr2:20947119-20947578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 60
               

               
Conread position:
               
190-334
               

               
Cow position:
               
chr2:21698741-21698887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
190-367
               

               
Cow position:
               
chr2:85930204-85930381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
25, 94
               

               
Conread position:
               
190-660
               

               
Cow position:
               
chr2:66404181-66403707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
24, 30
               

               
Conread position:
               
191-337
               

               
Cow position:
               
chr2:15812407-15812551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
191-387
               

               
Cow position:
               
chr2:16387433-16387627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 92
               

               
Conread position:
               
191-424
               

               
Cow position:
               
chr2:37219990-37220228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
23, 30
               

               
Conread position:
               
191-427
               

               
Cow position:
               
chr2:36630717-36630959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
191-480
               

               
Cow position:
               
chr2:43578049-43577759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
27, 65
               

               
Conread position:
               
191-571
               

               
Cow position:
               
chr2:15597715-15597352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
175, 30
               

               
Conread position:
               
191-644
               

               
Cow position:
               
chr2:991920-992358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 63
               

               
Conread position:
               
191-652
               

               
Cow position:
               
chr2:21383109-21382634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 284
               

               
Conread position:
               
191-662
               

               
Cow position:
               
chr2:45485219-45484739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
139, 25
               

               
Conread position:
               
192-335
               

               
Cow position:
               
chr2:74828467-74828607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
192-422
               

               
Cow position:
               
chr2:42643345-42643115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
23, 28
               

               
Conread position:
               
192-516
               

               
Cow position:
               
chr2:73353537-73353866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
25, 112
               

               
Conread position:
               
193-326
               

               
Cow position:
               
chr2:15162255-15162389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
193-367
               

               
Cow position:
               
chr2:1203430-1203606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
193-438
               

               
Cow position:
               
chr2:9591679-9591928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
29, 194
               

               
Conread position:
               
193-506
               

               
Cow position:
               
chr2:21764651-21764333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
193-513
               

               
Cow position:
               
chr2:48361319-48361643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 26
               

               
Conread position:
               
193-656
               

               
Cow position:
               
chr2:16839383-16839852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
193-685
               

               
Cow position:
               
chr2:24393939-24393447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
194-432
               

               
Cow position:
               
chr2:20940190-20940430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 81
               

               
Conread position:
               
194-644
               

               
Cow position:
               
chr2:47402956-47403416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
24, 96
               

               
Conread position:
               
195-335
               

               
Cow position:
               
chr2:46359297-46359157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
25, 108
               

               
Conread position:
               
195-441
               

               
Cow position:
               
chr2:25964733-25964487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
195-563
               

               
Cow position:
               
chr2:53851185-53851562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
197-334
               

               
Cow position:
               
chr2:21223872-21224005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
197-372
               

               
Cow position:
               
chr2:1435097-1435266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
34, 25
               

               
Conread position:
               
197-481
               

               
Cow position:
               
chr2:46194549-46194834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
25, 76
               

               
Conread position:
               
197-551
               

               
Cow position:
               
chr2:6697736-6697399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
164, 22
               

               
Conread position:
               
197-660
               

               
Cow position:
               
chr2:59179810-59180293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
198-513
               

               
Cow position:
               
chr2:85339705-85339387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
198-522
               

               
Cow position:
               
chr2:46330811-46331144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
198-522
               

               
Cow position:
               
chr2:82262624-82262295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
24, 76
               

               
Conread position:
               
200-512
               

               
Cow position:
               
chr2:62644356-62644657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
20, 52
               

               
Conread position:
               
200-554
               

               
Cow position:
               
chr2:39564110-39564462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
22, 142
               

               
Conread position:
               
201-393
               

               
Cow position:
               
chr2:80904167-80903976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
201-652
               

               
Cow position:
               
chr2:74249469-74249010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
19, 84
               

               
Conread position:
               
202-317
               

               
Cow position:
               
chr2:45281082-45281192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
202-322
               

               
Cow position:
               
chr2:14312293-14312414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
202-335
               

               
Cow position:
               
chr2:50400178-50400313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
12, 95
               

               
Conread position:
               
202-450
               

               
Cow position:
               
chr2:46020668-46020913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
128, 12
               

               
Conread position:
               
202-524
               

               
Cow position:
               
chr2:4070675-4071002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
142, 14
               

               
Conread position:
               
202-648
               

               
Cow position:
               
chr2:66480419-66479991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
134, 14
               

               
Conread position:
               
202-658
               

               
Cow position:
               
chr2:16428641-16428183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
203-563
               

               
Cow position:
               
chr2:25597733-25597371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
11, 85
               

               
Conread position:
               
205-512
               

               
Cow position:
               
chr2:69747857-69747546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 14
               

               
Conread position:
               
205-535
               

               
Cow position:
               
chr2:39489546-39489866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
205-672
               

               
Cow position:
               
chr2:11599202-11599653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
17, 78
               

               
Conread position:
               
206-455
               

               
Cow position:
               
chr2:69770265-69770518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
14, 78
               

               
Conread position:
               
206-512
               

               
Cow position:
               
chr2:80963881-80963580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
8, 14
               

               
Conread position:
               
206-665
               

               
Cow position:
               
chr2:31529272-31529707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
8, 89
               

               
Conread position:
               
207-563
               

               
Cow position:
               
chr2:72183724-72183365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 12
               

               
Conread position:
               
207-622
               

               
Cow position:
               
chr2:38362608-38362197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 143
               

               
Conread position:
               
208-432
               

               
Cow position:
               
chr2:1134627-1134398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
208-511
               

               
Cow position:
               
chr2:81349118-81348808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
159, 11
               

               
Conread position:
               
208-525
               

               
Cow position:
               
chr2:13604231-13604552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
161, 92
               

               
Conread position:
               
208-556
               

               
Cow position:
               
chr2:48864214-48863878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
186, 11
               

               
Conread position:
               
208-565
               

               
Cow position:
               
chr2:36017648-36017286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
160, 87
               

               
Conread position:
               
208-617
               

               
Cow position:
               
chr2:50565692-50566115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
123, 65
               

               
Conread position:
               
208-644
               

               
Cow position:
               
chr2:41088363-41087901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
64, 304
               

               
Conread position:
               
209-464
               

               
Cow position:
               
chr2:68716901-68716646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
152, 10
               

               
Conread position:
               
209-591
               

               
Cow position:
               
chr2:26806346-26805957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
186, 10
               

               
Conread position:
               
209-638
               

               
Cow position:
               
chr2:17114968-17114543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 10
               

               
Conread position:
               
209-643
               

               
Cow position:
               
chr2:15249948-15250371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
11, 65
               

               
Conread position:
               
209-650
               

               
Cow position:
               
chr2:77212414-77211974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
161, 186
               

               
Conread position:
               
210-663
               

               
Cow position:
               
chr2:44229921-44229478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
121, 9
               

               
Conread position:
               
211-513
               

               
Cow position:
               
chr2:46375160-46374872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
194, 14
               

               
Conread position:
               
212-367
               

               
Cow position:
               
chr2:47808500-47808651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
118, 7
               

               
Conread position:
               
214-619
               

               
Cow position:
               
chr2:69419806-69419410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
158, 36
               

               
Conread position:
               
214-627
               

               
Cow position:
               
chr2:1422140-1422539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
9, 100
               

               
Conread position:
               
217-513
               

               
Cow position:
               
chr2:19597568-19597867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
152, 197
               

               
Conread position:
               
219-337
               

               
Cow position:
               
chr2:7147668-7147550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
219-350
               

               
Cow position:
               
chr2:61816068-61815937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
219-507
               

               
Cow position:
               
chr2:36105047-36105335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
148, 76
               

               
Conread position:
               
219-600
               

               
Cow position:
               
chr2:15329179-15329535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
153, 54
               

               
Conread position:
               
219-638
               

               
Cow position:
               
chr2:6160550-6160151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
175, 39
               

               
Conread position:
               
219-660
               

               
Cow position:
               
chr2:80275515-80275073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
130, 66
               

               
Conread position:
               
220-486
               

               
Cow position:
               
chr2:23848043-23847781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
157, 53
               

               
Conread position:
               
220-656
               

               
Cow position:
               
chr2:68970511-68970962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
114, 91
               

               
Conread position:
               
221-477
               

               
Cow position:
               
chr2:1651182-1651439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
145, 206
               

               
Conread position:
               
222-327
               

               
Cow position:
               
chr2:47118566-47118458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
222-432
               

               
Cow position:
               
chr2:47119405-47119619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
145, 73
               

               
Conread position:
               
222-659
               

               
Cow position:
               
chr2:41145090-41145540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
144, 114
               

               
Conread position:
               
223-627
               

               
Cow position:
               
chr2:38795981-38795584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
107, 64
               

               
Conread position:
               
225-368
               

               
Cow position:
               
chr2:72541441-72541298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
105, 50
               

               
Conread position:
               
226-660
               

               
Cow position:
               
chr2:84983018-84983458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
227-455
               

               
Cow position:
               
chr2:47189055-47189286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
103, 161
               

               
Conread position:
               
228-511
               

               
Cow position:
               
chr2:69823373-69823659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
102, 14
               

               
Conread position:
               
229-512
               

               
Cow position:
               
chr2:46949100-46948821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
167, 15
               

               
Conread position:
               
229-513
               

               
Cow position:
               
chr2:42936426-42936138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
138, 46
               

               
Conread position:
               
229-523
               

               
Cow position:
               
chr2:44232668-44232372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
100, 25
               

               
Conread position:
               
229-655
               

               
Cow position:
               
chr2:39513813-39514254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
107, 15
               

               
Conread position:
               
229-662
               

               
Cow position:
               
chr2:19294388-19294813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
138, 53
               

               
Conread position:
               
231-452
               

               
Cow position:
               
chr2:16564472-16564696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
69, 53
               

               
Conread position:
               
234-522
               

               
Cow position:
               
chr2:23301539-23301812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
97, 66
               

               
Conread position:
               
234-619
               

               
Cow position:
               
chr2:29159694-29160088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
102, 41
               

               
Conread position:
               
234-660
               

               
Cow position:
               
chr2:44051095-44051528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 256
               

               
Conread position:
               
236-459
               

               
Cow position:
               
chr2:2382769-2382537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
238-626
               

               
Cow position:
               
chr2:37614740-37615131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
105, 91
               

               
Conread position:
               
238-644
               

               
Cow position:
               
chr2:46120841-46120440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
38, 92
               

               
Conread position:
               
240-509
               

               
Cow position:
               
chr2:42130229-42129960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
90, 161
               

               
Conread position:
               
240-596
               

               
Cow position:
               
chr2:71622254-71621891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
123, 74
               

               
Conread position:
               
241-511
               

               
Cow position:
               
chr2:4655301-4655029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
126, 199
               

               
Conread position:
               
241-563
               

               
Cow position:
               
chr2:16505678-16505358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
111, 48
               

               
Conread position:
               
241-600
               

               
Cow position:
               
chr2:43789904-43790262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
154, 42
               

               
Conread position:
               
241-660
               

               
Cow position:
               
chr2:40488610-40489021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
57, 118
               

               
Conread position:
               
243-443
               

               
Cow position:
               
chr2:30586410-30586612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
134, 53
               

               
Conread position:
               
243-525
               

               
Cow position:
               
chr2:9324794-9325082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 47
               

               
Conread position:
               
244-513
               

               
Cow position:
               
chr2:1638400-1638674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
123, 248
               

               
Conread position:
               
245-464
               

               
Cow position:
               
chr2:37424304-37424074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
246-551
               

               
Cow position:
               
chr2:5130645-5130349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
89, 39
               

               
Conread position:
               
248-595
               

               
Cow position:
               
chr2:827805-827460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
119, 38
               

               
Conread position:
               
248-626
               

               
Cow position:
               
chr2:19328352-19328718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 8
               

               
Conread position:
               
248-655
               

               
Cow position:
               
chr2:29121692-29122099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
104, 39
               

               
Conread position:
               
252-596
               

               
Cow position:
               
chr2:1762599-1762949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
59, 142
               

               
Conread position:
               
253-396
               

               
Cow position:
               
chr2:17493512-17493365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
253-626
               

               
Cow position:
               
chr2:60315536-60315165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
96, 55
               

               
Conread position:
               
253-652
               

               
Cow position:
               
chr2:17328560-17328957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
78, 45
               

               
Conread position:
               
253-660
               

               
Cow position:
               
chr2:25757821-25757408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
77, 151
               

               
Conread position:
               
253-660
               

               
Cow position:
               
chr2:73360300-73359890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
78, 171
               

               
Conread position:
               
253-662
               

               
Cow position:
               
chr2:63332002-63331585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 36
               

               
Conread position:
               
260-643
               

               
Cow position:
               
chr2:73545080-73544700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
112, 86
               

               
Conread position:
               
260-656
               

               
Cow position:
               
chr2:34750166-34749775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 130
               

               
Conread position:
               
260-666
               

               
Cow position:
               
chr2:46343325-46342925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
17, 101
               

               
Conread position:
               
265-655
               

               
Cow position:
               
chr2:12686964-12686573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 14
               

               
Conread position:
               
270-459
               

               
Cow position:
               
chr2:21078403-21078599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
272-554
               

               
Cow position:
               
chr2:30144552-30144829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
273-513
               

               
Cow position:
               
chr2:8355115-8354877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
94, 112
               

               
Conread position:
               
276-627
               

               
Cow position:
               
chr2:78249567-78249927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
79, 94
               

               
Conread position:
               
276-638
               

               
Cow position:
               
chr2:46351935-46351584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
269, 96
               

               
Conread position:
               
289-565
               

               
Cow position:
               
chr2:46130306-46130032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 119
               

               
Conread position:
               
290-630
               

               
Cow position:
               
chr2:45542551-45542211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
79, 134
               

               
Conread position:
               
290-673
               

               
Cow position:
               
chr2:41622327-41622724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
53, 133
               

               
Conread position:
               
297-654
               

               
Cow position:
               
chr2:54967857-54968223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 114
               

               
Conread position:
               
302-661
               

               
Cow position:
               
chr2:58153561-58153924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
93, 56
               

               
Conread position:
               
305-622
               

               
Cow position:
               
chr2:17805904-17805585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
62, 203
               

               
Conread position:
               
338-660
               

               
Cow position:
               
chr2:60091536-60091215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
355-633
               

               
Cow position:
               
chr2:69350654-69350374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
358-572
               

               
Cow position:
               
chr2:40466552-40466770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 9
               

               
Conread position:
               
360-644
               

               
Cow position:
               
chr2:40257497-40257212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 173
               

               
Conread position:
               
361-620
               

               
Cow position:
               
chr2:44007337-44007609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
36, 62
               

               
Conread position:
               
361-659
               

               
Cow position:
               
chr2:57733348-57733647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
36, 174
               

               
Conread position:
               
366-644
               

               
Cow position:
               
chr2:994441-994166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
31, 56
               

               
Conread position:
               
366-666
               

               
Cow position:
               
chr2:50449982-50449683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
164, 38
               

               
Conread position:
               
419-652
               

               
Cow position:
               
chr2:40703689-40703459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
95, 152
               
Show alignments to all cow chromosomes.