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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8022G19.5
        

               
Conread position:
               
95-509
               

               
Cow position:
               
chr29:8630418-8630025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
133, 9
               

               
Conread position:
               
98-654
               

               
Cow position:
               
chr29:17109624-17110166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
103-451
               

               
Cow position:
               
chr29:20178469-20178128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
22, 75
               

               
Conread position:
               
104-328
               

               
Cow position:
               
chr29:34530100-34530324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
123, 70
               

               
Conread position:
               
105-644
               

               
Cow position:
               
chr29:26017846-26017295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 60
               

               
Conread position:
               
105-657
               

               
Cow position:
               
chr29:4480509-4479952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 71
               

               
Conread position:
               
118-666
               

               
Cow position:
               
chr29:34360123-34359598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
40, 130
               

               
Conread position:
               
125-476
               

               
Cow position:
               
chr29:17428-17076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
21, 99
               

               
Conread position:
               
126-371
               

               
Cow position:
               
chr29:6014783-6015026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
52, 122
               

               
Conread position:
               
126-480
               

               
Cow position:
               
chr29:32521549-32521909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
47, 238
               

               
Conread position:
               
130-432
               

               
Cow position:
               
chr29:35630730-35630423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
98, 41
               

               
Conread position:
               
130-512
               

               
Cow position:
               
chr29:9638629-9638253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
51, 155
               

               
Conread position:
               
130-513
               

               
Cow position:
               
chr29:45005933-45005561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
46, 87
               

               
Conread position:
               
132-365
               

               
Cow position:
               
chr29:43252999-43252769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
207, 39
               

               
Conread position:
               
134-402
               

               
Cow position:
               
chr29:36404507-36404780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
42, 90
               

               
Conread position:
               
135-460
               

               
Cow position:
               
chr29:479073-479399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
27, 89
               

               
Conread position:
               
139-350
               

               
Cow position:
               
chr29:24033489-24033704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
139-423
               

               
Cow position:
               
chr29:45650647-45650366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
75, 32
               

               
Conread position:
               
142-497
               

               
Cow position:
               
chr29:17131911-17131567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 153
               

               
Conread position:
               
143-347
               

               
Cow position:
               
chr29:38247046-38246844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
71, 28
               

               
Conread position:
               
145-328
               

               
Cow position:
               
chr29:133892-134077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
146-334
               

               
Cow position:
               
chr29:37719614-37719795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
146-350
               

               
Cow position:
               
chr29:40651371-40651168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
183, 62
               

               
Conread position:
               
147-480
               

               
Cow position:
               
chr29:12005061-12004727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
67, 24
               

               
Conread position:
               
147-551
               

               
Cow position:
               
chr29:15940935-15940524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
67, 24
               

               
Conread position:
               
147-675
               

               
Cow position:
               
chr29:4875200-4874657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 24
               

               
Conread position:
               
148-656
               

               
Cow position:
               
chr29:21196946-21196442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
66, 23
               

               
Conread position:
               
150-492
               

               
Cow position:
               
chr29:14097427-14097064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
150-509
               

               
Cow position:
               
chr29:28883783-28884145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
22, 132
               

               
Conread position:
               
150-600
               

               
Cow position:
               
chr29:14112078-14112545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 21
               

               
Conread position:
               
152-347
               

               
Cow position:
               
chr29:5062840-5063027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
60, 19
               

               
Conread position:
               
152-563
               

               
Cow position:
               
chr29:40096673-40097085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
181, 19
               

               
Conread position:
               
153-404
               

               
Cow position:
               
chr29:24496272-24496523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 18
               

               
Conread position:
               
153-509
               

               
Cow position:
               
chr29:15738635-15738276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
154-405
               

               
Cow position:
               
chr29:2415104-2414853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
155-366
               

               
Cow position:
               
chr29:24345753-24345532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
57, 16
               

               
Conread position:
               
155-438
               

               
Cow position:
               
chr29:11684723-11685000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
54, 16
               

               
Conread position:
               
156-513
               

               
Cow position:
               
chr29:26616018-26615652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 138
               

               
Conread position:
               
157-380
               

               
Cow position:
               
chr29:26130496-26130719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
158-328
               

               
Cow position:
               
chr29:23980671-23980844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
158-336
               

               
Cow position:
               
chr29:40894652-40894822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
158-349
               

               
Cow position:
               
chr29:5897018-5896823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
158-394
               

               
Cow position:
               
chr29:17041361-17041600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
158-420
               

               
Cow position:
               
chr29:13108049-13108309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
158-422
               

               
Cow position:
               
chr29:2308991-2309255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
158-593
               

               
Cow position:
               
chr29:1325152-1325591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
158-655
               

               
Cow position:
               
chr29:35501934-35501452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 16
               

               
Conread position:
               
159-424
               

               
Cow position:
               
chr29:31185322-31185591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
159-432
               

               
Cow position:
               
chr29:30433394-30433672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
50, 15
               

               
Conread position:
               
159-438
               

               
Cow position:
               
chr29:8125878-8125595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
192, 12
               

               
Conread position:
               
159-518
               

               
Cow position:
               
chr29:40337810-40337464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
50, 67
               

               
Conread position:
               
159-538
               

               
Cow position:
               
chr29:26771156-26771534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
171, 12
               

               
Conread position:
               
159-652
               

               
Cow position:
               
chr29:42364299-42363808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
137, 12
               

               
Conread position:
               
160-454
               

               
Cow position:
               
chr29:7408173-7407876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
54, 11
               

               
Conread position:
               
160-485
               

               
Cow position:
               
chr29:16689754-16690085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 87
               

               
Conread position:
               
160-509
               

               
Cow position:
               
chr29:17795135-17795493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 313
               

               
Conread position:
               
160-524
               

               
Cow position:
               
chr29:37961256-37960897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
54, 11
               

               
Conread position:
               
161-607
               

               
Cow position:
               
chr29:18878785-18878313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
51, 123
               

               
Conread position:
               
162-315
               

               
Cow position:
               
chr29:14116760-14116910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
162-324
               

               
Cow position:
               
chr29:35735669-35735507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-326
               

               
Cow position:
               
chr29:40330490-40330654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-327
               

               
Cow position:
               
chr29:1582908-1582744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
162-328
               

               
Cow position:
               
chr29:13403383-13403548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
162-328
               

               
Cow position:
               
chr29:28949825-28949989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
162-328
               

               
Cow position:
               
chr29:29632222-29632053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
162-331
               

               
Cow position:
               
chr29:686473-686309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-347
               

               
Cow position:
               
chr29:29066144-29066325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
162-350
               

               
Cow position:
               
chr29:292438-292627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
162-350
               

               
Cow position:
               
chr29:22341463-22341652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-350
               

               
Cow position:
               
chr29:38410147-38410336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-350
               

               
Cow position:
               
chr29:38910286-38910097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
162-351
               

               
Cow position:
               
chr29:32353546-32353734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
57, 9
               

               
Conread position:
               
162-351
               

               
Cow position:
               
chr29:32516443-32516632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-364
               

               
Cow position:
               
chr29:40903001-40902804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
162-365
               

               
Cow position:
               
chr29:44901984-44901787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
162-366
               

               
Cow position:
               
chr29:19925035-19924829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-371
               

               
Cow position:
               
chr29:3502777-3502975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
162-394
               

               
Cow position:
               
chr29:30028713-30028476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
162-395
               

               
Cow position:
               
chr29:649986-650230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
162-395
               

               
Cow position:
               
chr29:15944287-15944522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-395
               

               
Cow position:
               
chr29:35434588-35434818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-408
               

               
Cow position:
               
chr29:961637-961889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-413
               

               
Cow position:
               
chr29:19386138-19386393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-414
               

               
Cow position:
               
chr29:7041117-7040872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
162-427
               

               
Cow position:
               
chr29:1933841-1933571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
58, 122
               

               
Conread position:
               
162-431
               

               
Cow position:
               
chr29:4649002-4648733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-432
               

               
Cow position:
               
chr29:24616351-24616625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-432
               

               
Cow position:
               
chr29:39425203-39425477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-436
               

               
Cow position:
               
chr29:28689328-28689605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
162-438
               

               
Cow position:
               
chr29:20933423-20933699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-443
               

               
Cow position:
               
chr29:35281221-35281496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr29:2483524-2483233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr29:9861151-9860860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr29:9917665-9917374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr29:15767675-15767384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr29:15855510-15855798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr29:15965603-15965311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr29:16785628-16785919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr29:18724038-18723747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr29:21209884-21210175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr29:22021067-22020778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr29:24304292-24304583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr29:26987282-26987571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr29:32298675-32298966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr29:35455251-35454960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-452
               

               
Cow position:
               
chr29:26734751-26735036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
162-453
               

               
Cow position:
               
chr29:23448883-23448578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr29:1445742-1446038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr29:2490611-2490907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr29:7848444-7848738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
65, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr29:11118761-11118465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr29:12898509-12898805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr29:13876470-13876174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr29:15841417-15841713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr29:20014337-20014041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-459
               

               
Cow position:
               
chr29:4328152-4328432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
162-460
               

               
Cow position:
               
chr29:23119659-23119354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
162-469
               

               
Cow position:
               
chr29:25957982-25957671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr29:2485013-2485325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
66, 12
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr29:3782766-3782455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr29:4611311-4611623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr29:5138951-5139268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr29:6455596-6455908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr29:7953780-7954092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr29:11114569-11114881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr29:11321636-11321324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr29:13623423-13623111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr29:23763385-23763073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr29:24945267-24944956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-471
               

               
Cow position:
               
chr29:10122387-10122074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr29:756685-756371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr29:1911693-1911376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr29:2534386-2534702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr29:9977343-9977027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr29:11697166-11697482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr29:11703741-11704061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr29:16035447-16035129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr29:20593682-20593997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr29:26449913-26449590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr29:31093611-31093302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr29:35300446-35300759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr29:35403827-35403510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-479
               

               
Cow position:
               
chr29:1479401-1479721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
162-479
               

               
Cow position:
               
chr29:6878981-6878662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-479
               

               
Cow position:
               
chr29:25824666-25824986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-479
               

               
Cow position:
               
chr29:38672142-38671821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 9
               

               
Conread position:
               
162-480
               

               
Cow position:
               
chr29:31926572-31926258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
162-484
               

               
Cow position:
               
chr29:6775272-6774958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-486
               

               
Cow position:
               
chr29:1956373-1956049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
14, 169
               

               
Conread position:
               
162-490
               

               
Cow position:
               
chr29:10456834-10456517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
162-501
               

               
Cow position:
               
chr29:3704485-3704142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
162-507
               

               
Cow position:
               
chr29:29974758-29975100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 59
               

               
Conread position:
               
162-509
               

               
Cow position:
               
chr29:18781584-18781925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
162-509
               

               
Cow position:
               
chr29:22935999-22936334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
192, 9
               

               
Conread position:
               
162-512
               

               
Cow position:
               
chr29:35484962-35485313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
162-513
               

               
Cow position:
               
chr29:17607134-17607486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
162-515
               

               
Cow position:
               
chr29:6925740-6926075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
205, 9
               

               
Conread position:
               
162-535
               

               
Cow position:
               
chr29:39567404-39567771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
162-563
               

               
Cow position:
               
chr29:6844911-6844509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-572
               

               
Cow position:
               
chr29:87299-86880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
162-591
               

               
Cow position:
               
chr29:34745936-34745506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-600
               

               
Cow position:
               
chr29:24623959-24624407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
57, 9
               

               
Conread position:
               
162-619
               

               
Cow position:
               
chr29:38581687-38582148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-626
               

               
Cow position:
               
chr29:20626295-20626755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
162-626
               

               
Cow position:
               
chr29:40583515-40583970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
162-654
               

               
Cow position:
               
chr29:10838668-10839150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-654
               

               
Cow position:
               
chr29:35406076-35405578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-655
               

               
Cow position:
               
chr29:22162539-22162049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
162-656
               

               
Cow position:
               
chr29:4625275-4624780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
162-656
               

               
Cow position:
               
chr29:35291817-35292301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
162-659
               

               
Cow position:
               
chr29:2744554-2744047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
162-659
               

               
Cow position:
               
chr29:6414232-6414734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-662
               

               
Cow position:
               
chr29:23874174-23874683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 9
               

               
Conread position:
               
162-665
               

               
Cow position:
               
chr29:16657409-16657914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 9
               

               
Conread position:
               
163-297
               

               
Cow position:
               
chr29:15289459-15289594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 8
               

               
Conread position:
               
163-328
               

               
Cow position:
               
chr29:5977403-5977238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
48, 58
               

               
Conread position:
               
163-328
               

               
Cow position:
               
chr29:17543169-17543330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
52, 8
               

               
Conread position:
               
163-329
               

               
Cow position:
               
chr29:22948945-22948778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
163-339
               

               
Cow position:
               
chr29:45588756-45588582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 110
               

               
Conread position:
               
163-366
               

               
Cow position:
               
chr29:2136380-2136173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 8
               

               
Conread position:
               
163-400
               

               
Cow position:
               
chr29:8164145-8163901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
54, 192
               

               
Conread position:
               
163-449
               

               
Cow position:
               
chr29:34293451-34293160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 66
               

               
Conread position:
               
163-452
               

               
Cow position:
               
chr29:7666310-7666022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
171, 8
               

               
Conread position:
               
163-455
               

               
Cow position:
               
chr29:18364665-18364395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
233, 28
               

               
Conread position:
               
163-471
               

               
Cow position:
               
chr29:38271958-38272266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
45, 66
               

               
Conread position:
               
163-474
               

               
Cow position:
               
chr29:14569247-14569563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
64, 46
               

               
Conread position:
               
163-512
               

               
Cow position:
               
chr29:28775735-28775396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
51, 8
               

               
Conread position:
               
163-607
               

               
Cow position:
               
chr29:21443625-21443170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
49, 8
               

               
Conread position:
               
163-625
               

               
Cow position:
               
chr29:1307146-1306679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
46, 58
               

               
Conread position:
               
163-660
               

               
Cow position:
               
chr29:9709417-9709911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 102
               

               
Conread position:
               
163-661
               

               
Cow position:
               
chr29:36530582-36531088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 8
               

               
Conread position:
               
164-348
               

               
Cow position:
               
chr29:26137505-26137690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 30
               

               
Conread position:
               
164-470
               

               
Cow position:
               
chr29:5233117-5232807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
44, 7
               

               
Conread position:
               
164-529
               

               
Cow position:
               
chr29:2071849-2071489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
50, 56
               

               
Conread position:
               
164-572
               

               
Cow position:
               
chr29:10156571-10156174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
7, 95
               

               
Conread position:
               
165-299
               

               
Cow position:
               
chr29:9332862-9333000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 58
               

               
Conread position:
               
165-305
               

               
Cow position:
               
chr29:28397852-28397712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
46, 6
               

               
Conread position:
               
165-326
               

               
Cow position:
               
chr29:18338827-18338664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 6
               

               
Conread position:
               
165-328
               

               
Cow position:
               
chr29:528572-528406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
165-328
               

               
Cow position:
               
chr29:19619321-19619155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
165-328
               

               
Cow position:
               
chr29:20255114-20255280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
165-334
               

               
Cow position:
               
chr29:37452022-37452191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
165-365
               

               
Cow position:
               
chr29:32308606-32308405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
7, 111
               

               
Conread position:
               
165-366
               

               
Cow position:
               
chr29:24650647-24650442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
165-384
               

               
Cow position:
               
chr29:1612855-1612635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
165-394
               

               
Cow position:
               
chr29:2837340-2837104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
165-394
               

               
Cow position:
               
chr29:14207304-14207067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
165-396
               

               
Cow position:
               
chr29:16612234-16612006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
189, 0
               

               
Conread position:
               
165-425
               

               
Cow position:
               
chr29:44233231-44232969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 120
               

               
Conread position:
               
165-509
               

               
Cow position:
               
chr29:20429251-20428900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
57, 6
               

               
Conread position:
               
165-515
               

               
Cow position:
               
chr29:8415652-8416005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
165-522
               

               
Cow position:
               
chr29:17409052-17409413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
16, 41
               

               
Conread position:
               
165-551
               

               
Cow position:
               
chr29:32290320-32290711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 58
               

               
Conread position:
               
165-600
               

               
Cow position:
               
chr29:5892568-5893009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 6
               

               
Conread position:
               
165-627
               

               
Cow position:
               
chr29:24952404-24952873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
11, 66
               

               
Conread position:
               
165-627
               

               
Cow position:
               
chr29:39111587-39111138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
53, 11
               

               
Conread position:
               
165-638
               

               
Cow position:
               
chr29:28195798-28195336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 6
               

               
Conread position:
               
165-644
               

               
Cow position:
               
chr29:19761993-19762466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 6
               

               
Conread position:
               
165-659
               

               
Cow position:
               
chr29:14501315-14501814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 6
               

               
Conread position:
               
165-677
               

               
Cow position:
               
chr29:3584407-3583877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 266
               

               
Conread position:
               
169-335
               

               
Cow position:
               
chr29:19907080-19907244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
53, 72
               

               
Conread position:
               
169-459
               

               
Cow position:
               
chr29:11136164-11135880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
45, 51
               

               
Conread position:
               
169-513
               

               
Cow position:
               
chr29:41811853-41811522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
45, 51
               

               
Conread position:
               
170-328
               

               
Cow position:
               
chr29:23135170-23135007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 102
               

               
Conread position:
               
170-346
               

               
Cow position:
               
chr29:36356576-36356746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
45, 104
               

               
Conread position:
               
170-366
               

               
Cow position:
               
chr29:3395835-3396024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
52, 116
               

               
Conread position:
               
170-395
               

               
Cow position:
               
chr29:20674083-20673849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 123
               

               
Conread position:
               
170-420
               

               
Cow position:
               
chr29:9195400-9195145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
8, 177
               

               
Conread position:
               
170-434
               

               
Cow position:
               
chr29:21000364-21000630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
17, 83
               

               
Conread position:
               
170-438
               

               
Cow position:
               
chr29:35636149-35636425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 112
               

               
Conread position:
               
170-572
               

               
Cow position:
               
chr29:750173-749787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
161, 49
               

               
Conread position:
               
170-628
               

               
Cow position:
               
chr29:43328362-43328819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
54, 122
               

               
Conread position:
               
170-638
               

               
Cow position:
               
chr29:19756173-19756634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
52, 129
               

               
Conread position:
               
170-665
               

               
Cow position:
               
chr29:16609463-16609976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 51
               

               
Conread position:
               
172-509
               

               
Cow position:
               
chr29:7965980-7966310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
158, 32
               

               
Conread position:
               
172-513
               

               
Cow position:
               
chr29:36216845-36217180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 48
               

               
Conread position:
               
173-355
               

               
Cow position:
               
chr29:22720856-22721039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
41, 47
               

               
Conread position:
               
173-364
               

               
Cow position:
               
chr29:18748856-18748665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
157, 42
               

               
Conread position:
               
173-394
               

               
Cow position:
               
chr29:406536-406314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
157, 174
               

               
Conread position:
               
173-432
               

               
Cow position:
               
chr29:16042663-16042927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-449
               

               
Cow position:
               
chr29:21227936-21228217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-449
               

               
Cow position:
               
chr29:32555787-32555508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
173-453
               

               
Cow position:
               
chr29:15251810-15252097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-474
               

               
Cow position:
               
chr29:18603819-18603513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-476
               

               
Cow position:
               
chr29:38746033-38745724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-485
               

               
Cow position:
               
chr29:17077965-17078283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
38, 142
               

               
Conread position:
               
173-509
               

               
Cow position:
               
chr29:26334661-26334323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
177, 247
               

               
Conread position:
               
173-512
               

               
Cow position:
               
chr29:6293739-6293411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
41, 47
               

               
Conread position:
               
173-538
               

               
Cow position:
               
chr29:465674-465307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
36, 48
               

               
Conread position:
               
173-618
               

               
Cow position:
               
chr29:29056911-29057353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
26, 79
               

               
Conread position:
               
174-348
               

               
Cow position:
               
chr29:26290854-26290679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 156
               

               
Conread position:
               
174-513
               

               
Cow position:
               
chr29:26673174-26672843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
189, 45
               

               
Conread position:
               
175-328
               

               
Cow position:
               
chr29:3145531-3145372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
47, 79
               

               
Conread position:
               
175-348
               

               
Cow position:
               
chr29:2263298-2263122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
175-413
               

               
Cow position:
               
chr29:4065818-4066055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
40, 45
               

               
Conread position:
               
175-512
               

               
Cow position:
               
chr29:28868361-28868710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
45, 213
               

               
Conread position:
               
175-660
               

               
Cow position:
               
chr29:4120576-4121079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
154, 102
               

               
Conread position:
               
176-328
               

               
Cow position:
               
chr29:21265466-21265614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 44
               

               
Conread position:
               
176-328
               

               
Cow position:
               
chr29:42268422-42268575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
52, 39
               

               
Conread position:
               
176-348
               

               
Cow position:
               
chr29:477838-478006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
176-365
               

               
Cow position:
               
chr29:11636746-11636559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 177
               

               
Conread position:
               
176-367
               

               
Cow position:
               
chr29:19338710-19338906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
176-383
               

               
Cow position:
               
chr29:26335647-26335437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 113
               

               
Conread position:
               
176-415
               

               
Cow position:
               
chr29:2644574-2644330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
157, 39
               

               
Conread position:
               
176-477
               

               
Cow position:
               
chr29:21534947-21534640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 49
               

               
Conread position:
               
176-525
               

               
Cow position:
               
chr29:24604417-24604056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
158, 39
               

               
Conread position:
               
176-572
               

               
Cow position:
               
chr29:25333722-25333329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
92, 125
               

               
Conread position:
               
176-661
               

               
Cow position:
               
chr29:31928710-31929206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
177-328
               

               
Cow position:
               
chr29:24777572-24777426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
177-355
               

               
Cow position:
               
chr29:41076296-41076116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
32, 44
               

               
Conread position:
               
177-459
               

               
Cow position:
               
chr29:94813-94543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
153, 39
               

               
Conread position:
               
177-509
               

               
Cow position:
               
chr29:40656425-40656761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 218
               

               
Conread position:
               
177-513
               

               
Cow position:
               
chr29:2984621-2984958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 9
               

               
Conread position:
               
177-551
               

               
Cow position:
               
chr29:4367453-4367828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
153, 104
               

               
Conread position:
               
177-551
               

               
Cow position:
               
chr29:22175425-22175783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
175, 38
               

               
Conread position:
               
177-652
               

               
Cow position:
               
chr29:41530580-41531062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
10, 47
               

               
Conread position:
               
177-665
               

               
Cow position:
               
chr29:12679888-12680384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
178-362
               

               
Cow position:
               
chr29:18085323-18085508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 125
               

               
Conread position:
               
179-328
               

               
Cow position:
               
chr29:13615909-13615764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
179-625
               

               
Cow position:
               
chr29:28197274-28196836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
47, 118
               

               
Conread position:
               
180-475
               

               
Cow position:
               
chr29:29302919-29302628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 57
               

               
Conread position:
               
180-476
               

               
Cow position:
               
chr29:18212247-18211963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 40
               

               
Conread position:
               
181-480
               

               
Cow position:
               
chr29:26329954-26330241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
188, 25
               

               
Conread position:
               
182-291
               

               
Cow position:
               
chr29:43516944-43516834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
182-328
               

               
Cow position:
               
chr29:30227401-30227547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
182-350
               

               
Cow position:
               
chr29:36243076-36243246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 61
               

               
Conread position:
               
182-401
               

               
Cow position:
               
chr29:5919588-5919364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 39
               

               
Conread position:
               
182-401
               

               
Cow position:
               
chr29:36586319-36586536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
148, 24
               

               
Conread position:
               
182-460
               

               
Cow position:
               
chr29:4647249-4646980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
32, 44
               

               
Conread position:
               
182-480
               

               
Cow position:
               
chr29:37785442-37785137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
27, 39
               

               
Conread position:
               
182-492
               

               
Cow position:
               
chr29:41747181-41747495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
147, 24
               

               
Conread position:
               
182-493
               

               
Cow position:
               
chr29:9686264-9685946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
40, 91
               

               
Conread position:
               
182-513
               

               
Cow position:
               
chr29:9911914-9912244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
28, 39
               

               
Conread position:
               
182-513
               

               
Cow position:
               
chr29:40165979-40166312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 85
               

               
Conread position:
               
182-559
               

               
Cow position:
               
chr29:11365984-11366354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
179, 83
               

               
Conread position:
               
182-661
               

               
Cow position:
               
chr29:8669092-8669574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 39
               

               
Conread position:
               
183-414
               

               
Cow position:
               
chr29:21924948-21925178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
147, 99
               

               
Conread position:
               
183-416
               

               
Cow position:
               
chr29:2188599-2188379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
183-419
               

               
Cow position:
               
chr29:41182977-41182736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 44
               

               
Conread position:
               
183-441
               

               
Cow position:
               
chr29:18694995-18695242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 106
               

               
Conread position:
               
183-452
               

               
Cow position:
               
chr29:11696271-11696537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
183-455
               

               
Cow position:
               
chr29:2623742-2623469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
36, 172
               

               
Conread position:
               
183-459
               

               
Cow position:
               
chr29:26129237-26129513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
31, 46
               

               
Conread position:
               
183-509
               

               
Cow position:
               
chr29:25088491-25088807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
32, 93
               

               
Conread position:
               
183-512
               

               
Cow position:
               
chr29:16195590-16195907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
183-554
               

               
Cow position:
               
chr29:19428406-19428774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
147, 30
               

               
Conread position:
               
183-558
               

               
Cow position:
               
chr29:37599466-37599102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
31, 37
               

               
Conread position:
               
183-590
               

               
Cow position:
               
chr29:109448-109830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
31, 37
               

               
Conread position:
               
183-639
               

               
Cow position:
               
chr29:12784218-12783757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
6, 101
               

               
Conread position:
               
183-660
               

               
Cow position:
               
chr29:27833725-27834204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
42, 118
               

               
Conread position:
               
184-385
               

               
Cow position:
               
chr29:16756794-16757000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
184-509
               

               
Cow position:
               
chr29:3237620-3237289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
24, 125
               

               
Conread position:
               
184-509
               

               
Cow position:
               
chr29:27009157-27009480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 146
               

               
Conread position:
               
184-518
               

               
Cow position:
               
chr29:9139147-9139494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
36, 116
               

               
Conread position:
               
184-620
               

               
Cow position:
               
chr29:44236207-44236621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
204, 31
               

               
Conread position:
               
184-670
               

               
Cow position:
               
chr29:22613174-22613650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
184, 30
               

               
Conread position:
               
185-366
               

               
Cow position:
               
chr29:6813183-6813362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
185-367
               

               
Cow position:
               
chr29:41850073-41849890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
185-416
               

               
Cow position:
               
chr29:21236856-21237090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
26, 36
               

               
Conread position:
               
185-513
               

               
Cow position:
               
chr29:5099022-5098698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 117
               

               
Conread position:
               
185-572
               

               
Cow position:
               
chr29:13372403-13372795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 36
               

               
Conread position:
               
186-299
               

               
Cow position:
               
chr29:5046533-5046419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
186-347
               

               
Cow position:
               
chr29:21665711-21665869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
186-451
               

               
Cow position:
               
chr29:35738529-35738266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
33, 189
               

               
Conread position:
               
186-492
               

               
Cow position:
               
chr29:16640496-16640186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
28, 123
               

               
Conread position:
               
186-627
               

               
Cow position:
               
chr29:732363-732796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
194, 30
               

               
Conread position:
               
187-348
               

               
Cow position:
               
chr29:26298724-26298885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 58
               

               
Conread position:
               
187-417
               

               
Cow position:
               
chr29:12451114-12451352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
128, 76
               

               
Conread position:
               
187-457
               

               
Cow position:
               
chr29:4194379-4194094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 66
               

               
Conread position:
               
187-654
               

               
Cow position:
               
chr29:40117314-40117779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 27
               

               
Conread position:
               
187-659
               

               
Cow position:
               
chr29:34297823-34297352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
22, 34
               

               
Conread position:
               
188-327
               

               
Cow position:
               
chr29:29121499-29121358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
188-328
               

               
Cow position:
               
chr29:11071961-11071820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 41
               

               
Conread position:
               
188-328
               

               
Cow position:
               
chr29:34609981-34609840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
188-336
               

               
Cow position:
               
chr29:18072672-18072821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
188-395
               

               
Cow position:
               
chr29:34736722-34736517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
142, 96
               

               
Conread position:
               
188-478
               

               
Cow position:
               
chr29:26984974-26985260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
208, 9
               

               
Conread position:
               
188-627
               

               
Cow position:
               
chr29:26778627-26779062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 142
               

               
Conread position:
               
188-656
               

               
Cow position:
               
chr29:28674943-28674486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
189-425
               

               
Cow position:
               
chr29:44135717-44135477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 25
               

               
Conread position:
               
189-434
               

               
Cow position:
               
chr29:32963298-32963546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 32
               

               
Conread position:
               
189-513
               

               
Cow position:
               
chr29:8926715-8926393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
20, 32
               

               
Conread position:
               
189-638
               

               
Cow position:
               
chr29:17222152-17222613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
32, 228
               

               
Conread position:
               
190-523
               

               
Cow position:
               
chr29:356071-356399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
190-627
               

               
Cow position:
               
chr29:7956239-7955802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
35, 84
               

               
Conread position:
               
191-471
               

               
Cow position:
               
chr29:13553878-13554167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
31, 99
               

               
Conread position:
               
192-330
               

               
Cow position:
               
chr29:138318-138455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
193-330
               

               
Cow position:
               
chr29:7051701-7051840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 104
               

               
Conread position:
               
193-509
               

               
Cow position:
               
chr29:26725912-26726233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 187
               

               
Conread position:
               
193-582
               

               
Cow position:
               
chr29:1556680-1557071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
25, 95
               

               
Conread position:
               
194-514
               

               
Cow position:
               
chr29:11562363-11562682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
26, 112
               

               
Conread position:
               
195-651
               

               
Cow position:
               
chr29:25737667-25737209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 89
               

               
Conread position:
               
196-513
               

               
Cow position:
               
chr29:20903537-20903222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
26, 140
               

               
Conread position:
               
196-542
               

               
Cow position:
               
chr29:23984213-23983861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 343
               

               
Conread position:
               
197-477
               

               
Cow position:
               
chr29:707193-706917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
197-501
               

               
Cow position:
               
chr29:18735891-18735583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
197-518
               

               
Cow position:
               
chr29:22895468-22895800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
198-480
               

               
Cow position:
               
chr29:3502309-3502606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
198-480
               

               
Cow position:
               
chr29:44378665-44378379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
16, 22
               

               
Conread position:
               
199-481
               

               
Cow position:
               
chr29:24119983-24119704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
19, 98
               

               
Conread position:
               
199-660
               

               
Cow position:
               
chr29:19949062-19949523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 136
               

               
Conread position:
               
201-524
               

               
Cow position:
               
chr29:40852692-40853007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
202-434
               

               
Cow position:
               
chr29:6472074-6472306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
50, 22
               

               
Conread position:
               
202-511
               

               
Cow position:
               
chr29:36183033-36183347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
202-630
               

               
Cow position:
               
chr29:10653104-10653511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
203-509
               

               
Cow position:
               
chr29:25474665-25474987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
19, 215
               

               
Conread position:
               
203-673
               

               
Cow position:
               
chr29:16617386-16617863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
205-455
               

               
Cow position:
               
chr29:11704881-11705131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 81
               

               
Conread position:
               
206-662
               

               
Cow position:
               
chr29:34773968-34773530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
14, 57
               

               
Conread position:
               
208-337
               

               
Cow position:
               
chr29:16735241-16735113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
208-510
               

               
Cow position:
               
chr29:24103784-24103476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
149, 11
               

               
Conread position:
               
208-511
               

               
Cow position:
               
chr29:22714966-22714657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
12, 252
               

               
Conread position:
               
208-512
               

               
Cow position:
               
chr29:6286393-6286094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
124, 11
               

               
Conread position:
               
208-586
               

               
Cow position:
               
chr29:24578641-24578998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 11
               

               
Conread position:
               
208-619
               

               
Cow position:
               
chr29:11915581-11915999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
208-669
               

               
Cow position:
               
chr29:4520097-4520564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
12, 79
               

               
Conread position:
               
209-513
               

               
Cow position:
               
chr29:16309513-16309811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
209-524
               

               
Cow position:
               
chr29:17668258-17668566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 127
               

               
Conread position:
               
209-655
               

               
Cow position:
               
chr29:23844597-23845057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
133, 10
               

               
Conread position:
               
209-683
               

               
Cow position:
               
chr29:34744851-34744391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
121, 10
               

               
Conread position:
               
210-367
               

               
Cow position:
               
chr29:13458822-13458978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
12, 65
               

               
Conread position:
               
210-656
               

               
Cow position:
               
chr29:35677779-35677325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
120, 72
               

               
Conread position:
               
211-473
               

               
Cow position:
               
chr29:39642944-39643204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
125, 8
               

               
Conread position:
               
211-506
               

               
Cow position:
               
chr29:32548520-32548818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
219-513
               

               
Cow position:
               
chr29:868547-868843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
110, 81
               

               
Conread position:
               
219-513
               

               
Cow position:
               
chr29:1229383-1229675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
111, 47
               

               
Conread position:
               
219-653
               

               
Cow position:
               
chr29:23697753-23698181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
114, 63
               

               
Conread position:
               
221-624
               

               
Cow position:
               
chr29:23155027-23155400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
303, 133
               

               
Conread position:
               
222-390
               

               
Cow position:
               
chr29:2532839-2533005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
222-452
               

               
Cow position:
               
chr29:5677562-5677796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
224-432
               

               
Cow position:
               
chr29:5109431-5109215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
224-511
               

               
Cow position:
               
chr29:463874-463588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
111, 63
               

               
Conread position:
               
224-551
               

               
Cow position:
               
chr29:28166438-28166120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
56, 194
               

               
Conread position:
               
224-622
               

               
Cow position:
               
chr29:40763905-40763515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
85, 146
               

               
Conread position:
               
224-662
               

               
Cow position:
               
chr29:28739408-28739847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
112, 43
               

               
Conread position:
               
227-450
               

               
Cow position:
               
chr29:28446477-28446242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
227-509
               

               
Cow position:
               
chr29:35376469-35376746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
125, 100
               

               
Conread position:
               
228-627
               

               
Cow position:
               
chr29:31489103-31489510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
122, 48
               

               
Conread position:
               
229-480
               

               
Cow position:
               
chr29:14484761-14484502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
102, 55
               

               
Conread position:
               
230-660
               

               
Cow position:
               
chr29:30440711-30441159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 46
               

               
Conread position:
               
232-505
               

               
Cow position:
               
chr29:26501293-26501566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
98, 77
               

               
Conread position:
               
233-673
               

               
Cow position:
               
chr29:26275402-26275832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
124, 95
               

               
Conread position:
               
234-695
               

               
Cow position:
               
chr29:6337452-6337911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 48
               

               
Conread position:
               
236-563
               

               
Cow position:
               
chr29:26654249-26653920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
94, 167
               

               
Conread position:
               
237-511
               

               
Cow position:
               
chr29:22778389-22778110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
99, 256
               

               
Conread position:
               
237-525
               

               
Cow position:
               
chr29:41364902-41365189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 48
               

               
Conread position:
               
239-638
               

               
Cow position:
               
chr29:22690014-22690424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
92, 177
               

               
Conread position:
               
241-505
               

               
Cow position:
               
chr29:24080252-24079981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 138
               

               
Conread position:
               
242-512
               

               
Cow position:
               
chr29:43009287-43009017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
108, 54
               

               
Conread position:
               
244-612
               

               
Cow position:
               
chr29:44988982-44988633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
86, 59
               

               
Conread position:
               
244-642
               

               
Cow position:
               
chr29:11433922-11434313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
245-450
               

               
Cow position:
               
chr29:10818636-10818429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
93, 42
               

               
Conread position:
               
245-455
               

               
Cow position:
               
chr29:9718972-9718757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
124, 112
               

               
Conread position:
               
245-509
               

               
Cow position:
               
chr29:3100461-3100203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
82, 180
               

               
Conread position:
               
252-513
               

               
Cow position:
               
chr29:32211252-32211003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
115, 129
               

               
Conread position:
               
254-556
               

               
Cow position:
               
chr29:5186689-5186387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
103, 88
               

               
Conread position:
               
260-653
               

               
Cow position:
               
chr29:25091924-25092314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 137
               

               
Conread position:
               
262-627
               

               
Cow position:
               
chr29:37618123-37618494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
134, 27
               

               
Conread position:
               
265-513
               

               
Cow position:
               
chr29:10235309-10235066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 35
               

               
Conread position:
               
265-624
               

               
Cow position:
               
chr29:43099925-43099566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
87, 38
               

               
Conread position:
               
271-630
               

               
Cow position:
               
chr29:4085142-4085485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
59, 135
               

               
Conread position:
               
276-513
               

               
Cow position:
               
chr29:44682269-44682036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 141
               

               
Conread position:
               
276-624
               

               
Cow position:
               
chr29:27826353-27826688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 129
               

               
Conread position:
               
277-565
               

               
Cow position:
               
chr29:23244051-23243753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
90, 163
               

               
Conread position:
               
283-675
               

               
Cow position:
               
chr29:31674465-31674870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
84, 98
               

               
Conread position:
               
290-666
               

               
Cow position:
               
chr29:12025629-12025254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
47, 136
               

               
Conread position:
               
293-563
               

               
Cow position:
               
chr29:29314810-29314537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
59, 255
               

               
Conread position:
               
321-627
               

               
Cow position:
               
chr29:34359107-34358793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 108
               

               
Conread position:
               
413-623
               

               
Cow position:
               
chr29:23825242-23825030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
101, 147
               
Show alignments to all cow chromosomes.