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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8022G19.5
        

               
Conread position:
               
94-432
               

               
Cow position:
               
chr6:46161829-46161494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
124, 49
               

               
Conread position:
               
97-508
               

               
Cow position:
               
chr6:7989726-7989310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
100, 33
               

               
Conread position:
               
99-331
               

               
Cow position:
               
chr6:34075718-34075942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
27, 102
               

               
Conread position:
               
99-333
               

               
Cow position:
               
chr6:222749-222502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 126
               

               
Conread position:
               
99-475
               

               
Cow position:
               
chr6:49410988-49410625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
72, 24
               

               
Conread position:
               
105-638
               

               
Cow position:
               
chr6:323604-323064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
113, 38
               

               
Conread position:
               
105-648
               

               
Cow position:
               
chr6:10106294-10105735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 72
               

               
Conread position:
               
111-627
               

               
Cow position:
               
chr6:49398911-49398402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 112
               

               
Conread position:
               
122-513
               

               
Cow position:
               
chr6:9751323-9750947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
5, 72
               

               
Conread position:
               
124-417
               

               
Cow position:
               
chr6:41264844-41265135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 94
               

               
Conread position:
               
125-651
               

               
Cow position:
               
chr6:31535851-31535322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
126-619
               

               
Cow position:
               
chr6:35990501-35990020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
50, 148
               

               
Conread position:
               
130-490
               

               
Cow position:
               
chr6:456905-457265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 98
               

               
Conread position:
               
130-509
               

               
Cow position:
               
chr6:561344-561733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 39
               

               
Conread position:
               
132-451
               

               
Cow position:
               
chr6:8804800-8804481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
51, 89
               

               
Conread position:
               
132-660
               

               
Cow position:
               
chr6:52478698-52478150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 14
               

               
Conread position:
               
133-420
               

               
Cow position:
               
chr6:11097686-11097977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
133-626
               

               
Cow position:
               
chr6:46860439-46859944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 233
               

               
Conread position:
               
134-517
               

               
Cow position:
               
chr6:51387494-51387863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
39, 82
               

               
Conread position:
               
134-619
               

               
Cow position:
               
chr6:35842389-35842879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
139-368
               

               
Cow position:
               
chr6:53345529-53345758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
33, 146
               

               
Conread position:
               
139-476
               

               
Cow position:
               
chr6:50446026-50445695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
31, 79
               

               
Conread position:
               
139-660
               

               
Cow position:
               
chr6:60859570-60859035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
84, 32
               

               
Conread position:
               
139-662
               

               
Cow position:
               
chr6:22332665-22332128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 274
               

               
Conread position:
               
140-593
               

               
Cow position:
               
chr6:40774611-40774140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 37
               

               
Conread position:
               
143-474
               

               
Cow position:
               
chr6:67554120-67554456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
85, 28
               

               
Conread position:
               
143-489
               

               
Cow position:
               
chr6:52248393-52248046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 40
               

               
Conread position:
               
144-323
               

               
Cow position:
               
chr6:17740298-17740118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
144-328
               

               
Cow position:
               
chr6:1174760-1174578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
108, 30
               

               
Conread position:
               
144-333
               

               
Cow position:
               
chr6:32024597-32024409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
71, 30
               

               
Conread position:
               
144-455
               

               
Cow position:
               
chr6:607003-607313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
66, 32
               

               
Conread position:
               
144-655
               

               
Cow position:
               
chr6:47305069-47305597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
65, 27
               

               
Conread position:
               
146-449
               

               
Cow position:
               
chr6:18969029-18968734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
146-472
               

               
Cow position:
               
chr6:54806966-54807296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
76, 25
               

               
Conread position:
               
147-314
               

               
Cow position:
               
chr6:68272385-68272217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
75, 24
               

               
Conread position:
               
147-317
               

               
Cow position:
               
chr6:60516472-60516645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
147-326
               

               
Cow position:
               
chr6:76548-76369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 24
               

               
Conread position:
               
147-331
               

               
Cow position:
               
chr6:59597401-59597586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
75, 24
               

               
Conread position:
               
147-335
               

               
Cow position:
               
chr6:12387576-12387396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
147-346
               

               
Cow position:
               
chr6:45617696-45617498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 24
               

               
Conread position:
               
147-391
               

               
Cow position:
               
chr6:65862430-65862678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
76, 29
               

               
Conread position:
               
147-415
               

               
Cow position:
               
chr6:55842416-55842143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
67, 24
               

               
Conread position:
               
147-427
               

               
Cow position:
               
chr6:16518112-16517849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
249, 24
               

               
Conread position:
               
147-563
               

               
Cow position:
               
chr6:24781819-24781395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
128, 24
               

               
Conread position:
               
147-591
               

               
Cow position:
               
chr6:6060813-6060378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
147-656
               

               
Cow position:
               
chr6:14696628-14696135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
76, 24
               

               
Conread position:
               
148-331
               

               
Cow position:
               
chr6:7801621-7801441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
149-347
               

               
Cow position:
               
chr6:66304095-66303909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
150-401
               

               
Cow position:
               
chr6:6614179-6614437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
22, 43
               

               
Conread position:
               
150-620
               

               
Cow position:
               
chr6:33865346-33864923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
151-523
               

               
Cow position:
               
chr6:20098216-20097839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 20
               

               
Conread position:
               
152-449
               

               
Cow position:
               
chr6:24601270-24600970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 19
               

               
Conread position:
               
153-335
               

               
Cow position:
               
chr6:54479394-54479578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 79
               

               
Conread position:
               
153-357
               

               
Cow position:
               
chr6:19570038-19569832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
154-333
               

               
Cow position:
               
chr6:6471021-6470845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
154-399
               

               
Cow position:
               
chr6:7103484-7103232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 17
               

               
Conread position:
               
154-470
               

               
Cow position:
               
chr6:19515751-19516071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
154-565
               

               
Cow position:
               
chr6:9736888-9736494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
96, 20
               

               
Conread position:
               
155-311
               

               
Cow position:
               
chr6:65016138-65015982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
155-328
               

               
Cow position:
               
chr6:16492168-16491997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
155-328
               

               
Cow position:
               
chr6:25358829-25358996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
122, 16
               

               
Conread position:
               
155-328
               

               
Cow position:
               
chr6:53799128-53798959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
155-328
               

               
Cow position:
               
chr6:54357619-54357453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
155-470
               

               
Cow position:
               
chr6:11455903-11455584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
53, 19
               

               
Conread position:
               
155-512
               

               
Cow position:
               
chr6:55475002-55475364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
186, 16
               

               
Conread position:
               
155-554
               

               
Cow position:
               
chr6:42565438-42565843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
156-326
               

               
Cow position:
               
chr6:15046343-15046175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 67
               

               
Conread position:
               
156-361
               

               
Cow position:
               
chr6:3719256-3719050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
56, 201
               

               
Conread position:
               
157-339
               

               
Cow position:
               
chr6:37331720-37331893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
157-422
               

               
Cow position:
               
chr6:619307-619577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 196
               

               
Conread position:
               
157-513
               

               
Cow position:
               
chr6:47339597-47339246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 128
               

               
Conread position:
               
157-513
               

               
Cow position:
               
chr6:54369145-54368794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
57, 14
               

               
Conread position:
               
157-513
               

               
Cow position:
               
chr6:56842911-56843264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
30, 128
               

               
Conread position:
               
158-328
               

               
Cow position:
               
chr6:8753557-8753384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 103
               

               
Conread position:
               
158-328
               

               
Cow position:
               
chr6:41824076-41823901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
158-420
               

               
Cow position:
               
chr6:706896-707163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
158-449
               

               
Cow position:
               
chr6:27854273-27854567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
16, 72
               

               
Conread position:
               
158-509
               

               
Cow position:
               
chr6:3719736-3720095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
14, 251
               

               
Conread position:
               
158-525
               

               
Cow position:
               
chr6:5114294-5113931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
158-650
               

               
Cow position:
               
chr6:46465580-46466068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 138
               

               
Conread position:
               
159-366
               

               
Cow position:
               
chr6:14839270-14839065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
189, 12
               

               
Conread position:
               
159-367
               

               
Cow position:
               
chr6:32210872-32210668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
159-454
               

               
Cow position:
               
chr6:50454727-50455035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 20
               

               
Conread position:
               
159-455
               

               
Cow position:
               
chr6:62479409-62479108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
171, 12
               

               
Conread position:
               
159-512
               

               
Cow position:
               
chr6:54701291-54701650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
20, 141
               

               
Conread position:
               
159-627
               

               
Cow position:
               
chr6:24031131-24031590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 12
               

               
Conread position:
               
159-654
               

               
Cow position:
               
chr6:21004412-21004932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
161-317
               

               
Cow position:
               
chr6:8599548-8599699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 10
               

               
Conread position:
               
161-328
               

               
Cow position:
               
chr6:46666865-46667027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
48, 10
               

               
Conread position:
               
161-347
               

               
Cow position:
               
chr6:24631333-24631154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
161-360
               

               
Cow position:
               
chr6:17068061-17067865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
53, 10
               

               
Conread position:
               
161-364
               

               
Cow position:
               
chr6:61113508-61113714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
54, 10
               

               
Conread position:
               
161-381
               

               
Cow position:
               
chr6:10605443-10605666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
47, 10
               

               
Conread position:
               
161-395
               

               
Cow position:
               
chr6:40138947-40138724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
162-299
               

               
Cow position:
               
chr6:10682507-10682643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
162-315
               

               
Cow position:
               
chr6:60274464-60274312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-326
               

               
Cow position:
               
chr6:12934381-12934220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
162-326
               

               
Cow position:
               
chr6:19843182-19843346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-326
               

               
Cow position:
               
chr6:55582238-55582074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-328
               

               
Cow position:
               
chr6:11829925-11830093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
162-328
               

               
Cow position:
               
chr6:48468562-48468726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
162-328
               

               
Cow position:
               
chr6:60152795-60152957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
162-331
               

               
Cow position:
               
chr6:5329914-5330072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
162-334
               

               
Cow position:
               
chr6:12116293-12116123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
115, 9
               

               
Conread position:
               
162-336
               

               
Cow position:
               
chr6:41158412-41158238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-350
               

               
Cow position:
               
chr6:18911825-18911636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-350
               

               
Cow position:
               
chr6:20215487-20215298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-350
               

               
Cow position:
               
chr6:45211053-45211242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-353
               

               
Cow position:
               
chr6:1002475-1002287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
162-364
               

               
Cow position:
               
chr6:20329780-20329982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
60, 14
               

               
Conread position:
               
162-364
               

               
Cow position:
               
chr6:55608047-55607855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
162-366
               

               
Cow position:
               
chr6:12500616-12500821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
162-366
               

               
Cow position:
               
chr6:12927879-12928078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
162-366
               

               
Cow position:
               
chr6:13605470-13605264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-366
               

               
Cow position:
               
chr6:40320441-40320646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
162-366
               

               
Cow position:
               
chr6:40449758-40449552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-366
               

               
Cow position:
               
chr6:41835209-41835415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-367
               

               
Cow position:
               
chr6:10649259-10649064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
162-367
               

               
Cow position:
               
chr6:53178399-53178599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
168, 14
               

               
Conread position:
               
162-398
               

               
Cow position:
               
chr6:50746736-50746983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
162-401
               

               
Cow position:
               
chr6:32916161-32915925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
162-406
               

               
Cow position:
               
chr6:24327376-24327137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
162-407
               

               
Cow position:
               
chr6:46570879-46571122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
207, 12
               

               
Conread position:
               
162-420
               

               
Cow position:
               
chr6:1911077-1911339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-420
               

               
Cow position:
               
chr6:20580870-20580608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-420
               

               
Cow position:
               
chr6:37634549-37634801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-420
               

               
Cow position:
               
chr6:47625200-47624944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
162-424
               

               
Cow position:
               
chr6:11869028-11868762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
62, 9
               

               
Conread position:
               
162-424
               

               
Cow position:
               
chr6:12947595-12947329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-424
               

               
Cow position:
               
chr6:33489326-33489060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-424
               

               
Cow position:
               
chr6:53542560-53542295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
162-424
               

               
Cow position:
               
chr6:55239599-55239866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
162-431
               

               
Cow position:
               
chr6:11020567-11020839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-431
               

               
Cow position:
               
chr6:33863515-33863784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-432
               

               
Cow position:
               
chr6:2453868-2454143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-432
               

               
Cow position:
               
chr6:18502905-18502631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
162-432
               

               
Cow position:
               
chr6:52482254-52482528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-432
               

               
Cow position:
               
chr6:57796138-57795864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-448
               

               
Cow position:
               
chr6:25348011-25347721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-448
               

               
Cow position:
               
chr6:36299419-36299129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr6:3157467-3157179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr6:3937411-3937702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr6:11034348-11034057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr6:11402228-11402520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr6:12972305-12972594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr6:12998325-12998616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr6:13531573-13531864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr6:21164212-21164503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr6:25410365-25410656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr6:27939686-27939977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr6:28642985-28643276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr6:28680520-28680229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr6:37389218-37389509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr6:41798546-41798255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr6:45938188-45938478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr6:45976408-45976699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 12
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr6:48290701-48290992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr6:49580006-49580297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr6:52424780-52425070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr6:57522084-57522373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr6:62418771-62418480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr6:65839115-65838824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr6:65863233-65863523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-449
               

               
Cow position:
               
chr6:67818441-67818152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-450
               

               
Cow position:
               
chr6:49002966-49002685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
52, 58
               

               
Conread position:
               
162-453
               

               
Cow position:
               
chr6:49684807-49684510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-453
               

               
Cow position:
               
chr6:64131549-64131844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr6:6557780-6558076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr6:6578015-6577719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr6:14388817-14388521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr6:17935267-17934971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr6:18418693-18418397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr6:25363460-25363756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr6:27541470-27541766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr6:37736829-37737125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr6:38053648-38053944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr6:41822928-41822632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr6:43604530-43604826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr6:45751842-45752138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr6:54899862-54900158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr6:55721077-55721373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr6:56808330-56808034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr6:59834987-59835283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-455
               

               
Cow position:
               
chr6:5958257-5957976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
162-455
               

               
Cow position:
               
chr6:13741456-13741753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
169, 9
               

               
Conread position:
               
162-465
               

               
Cow position:
               
chr6:47540285-47540595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-469
               

               
Cow position:
               
chr6:2898671-2898982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-469
               

               
Cow position:
               
chr6:14198555-14198864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-469
               

               
Cow position:
               
chr6:14225434-14225125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-469
               

               
Cow position:
               
chr6:25095783-25096094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-469
               

               
Cow position:
               
chr6:38061521-38061831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-469
               

               
Cow position:
               
chr6:38917130-38916819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-469
               

               
Cow position:
               
chr6:44705582-44705271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-469
               

               
Cow position:
               
chr6:52462785-52463096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-469
               

               
Cow position:
               
chr6:56888321-56888623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
162-469
               

               
Cow position:
               
chr6:59052327-59052638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr6:126199-125887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr6:5280201-5279894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr6:9235421-9235733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr6:10013706-10014018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr6:10536030-10535718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr6:10865849-10866161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr6:11452958-11452646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr6:13619712-13619400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr6:19819353-19819663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr6:20174291-20174603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr6:28674967-28674655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr6:31192568-31192255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr6:34016814-34016502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr6:36258863-36259175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr6:37217527-37217839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr6:40710284-40710596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-471
               

               
Cow position:
               
chr6:21719021-21718710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
65, 9
               

               
Conread position:
               
162-471
               

               
Cow position:
               
chr6:63178029-63178341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-473
               

               
Cow position:
               
chr6:36901919-36902234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr6:444019-443702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr6:595977-595661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr6:13945772-13946088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr6:15881915-15881599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr6:25207345-25207662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr6:28184412-28184096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr6:31520347-31520663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr6:33884174-33883863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr6:40250895-40250580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr6:43049920-43050234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
142, 14
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr6:43896913-43896596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr6:43999250-43998934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 12
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr6:45694770-45695087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr6:45765212-45764895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr6:46637941-46638258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr6:52022093-52021778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr6:53271563-53271879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr6:58761852-58762173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr6:64337863-64337546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr6:67403459-67403143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr6:68340040-68339725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-474
               

               
Cow position:
               
chr6:68871020-68870703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-475
               

               
Cow position:
               
chr6:12623230-12623530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
162-477
               

               
Cow position:
               
chr6:44372184-44371871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
162-479
               

               
Cow position:
               
chr6:7466742-7466422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-479
               

               
Cow position:
               
chr6:13307498-13307176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
162-479
               

               
Cow position:
               
chr6:24237444-24237124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
162-479
               

               
Cow position:
               
chr6:40278961-40279282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-479
               

               
Cow position:
               
chr6:49794867-49795188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-486
               

               
Cow position:
               
chr6:27485916-27486245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-490
               

               
Cow position:
               
chr6:18961763-18961430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-500
               

               
Cow position:
               
chr6:62925234-62924899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
47, 12
               

               
Conread position:
               
162-501
               

               
Cow position:
               
chr6:43188652-43188994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-507
               

               
Cow position:
               
chr6:9375615-9375278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-509
               

               
Cow position:
               
chr6:7312344-7312699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
14, 241
               

               
Conread position:
               
162-509
               

               
Cow position:
               
chr6:55040458-55040108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
162-512
               

               
Cow position:
               
chr6:6943921-6943572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
108, 14
               

               
Conread position:
               
162-512
               

               
Cow position:
               
chr6:19681757-19681416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
164, 9
               

               
Conread position:
               
162-512
               

               
Cow position:
               
chr6:58073802-58074157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
14, 109
               

               
Conread position:
               
162-513
               

               
Cow position:
               
chr6:4864779-4864437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
162-525
               

               
Cow position:
               
chr6:16625707-16626071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
172, 9
               

               
Conread position:
               
162-525
               

               
Cow position:
               
chr6:67214501-67214871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-550
               

               
Cow position:
               
chr6:54991233-54990857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
205, 9
               

               
Conread position:
               
162-558
               

               
Cow position:
               
chr6:12551027-12551421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
162-562
               

               
Cow position:
               
chr6:60057906-60057495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
15, 128
               

               
Conread position:
               
162-593
               

               
Cow position:
               
chr6:40713740-40713315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
167, 9
               

               
Conread position:
               
162-596
               

               
Cow position:
               
chr6:2547002-2547452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 9
               

               
Conread position:
               
162-596
               

               
Cow position:
               
chr6:36195973-36196402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-627
               

               
Cow position:
               
chr6:15242595-15243066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
162-627
               

               
Cow position:
               
chr6:61515438-61514971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-628
               

               
Cow position:
               
chr6:54647763-54647271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
162-638
               

               
Cow position:
               
chr6:18080755-18080278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
55, 12
               

               
Conread position:
               
162-638
               

               
Cow position:
               
chr6:32867447-32866983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
162-642
               

               
Cow position:
               
chr6:18447749-18447273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-643
               

               
Cow position:
               
chr6:56849777-56850260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
162-654
               

               
Cow position:
               
chr6:27851945-27851454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
178, 12
               

               
Conread position:
               
162-655
               

               
Cow position:
               
chr6:11192693-11192225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
162-655
               

               
Cow position:
               
chr6:53933081-53932589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
162-656
               

               
Cow position:
               
chr6:23695757-23696248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
162-656
               

               
Cow position:
               
chr6:54365564-54365075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
162-659
               

               
Cow position:
               
chr6:17557134-17557629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
162-659
               

               
Cow position:
               
chr6:55610478-55609969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
162-660
               

               
Cow position:
               
chr6:8562475-8562975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
162-662
               

               
Cow position:
               
chr6:18803150-18802639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
47, 12
               

               
Conread position:
               
162-663
               

               
Cow position:
               
chr6:46557817-46558317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
162-664
               

               
Cow position:
               
chr6:32287379-32287896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
162-687
               

               
Cow position:
               
chr6:21587662-21587145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
162-688
               

               
Cow position:
               
chr6:18987976-18988479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
162-704
               

               
Cow position:
               
chr6:47519810-47520354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 12
               

               
Conread position:
               
163-330
               

               
Cow position:
               
chr6:59277181-59277013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
57, 73
               

               
Conread position:
               
163-348
               

               
Cow position:
               
chr6:3936306-3936482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
163-348
               

               
Cow position:
               
chr6:29077487-29077670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 8
               

               
Conread position:
               
163-352
               

               
Cow position:
               
chr6:14063899-14063715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 57
               

               
Conread position:
               
163-367
               

               
Cow position:
               
chr6:1784013-1783817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
59, 78
               

               
Conread position:
               
163-367
               

               
Cow position:
               
chr6:28559174-28559384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
163-509
               

               
Cow position:
               
chr6:10459496-10459848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
163-509
               

               
Cow position:
               
chr6:48281754-48282098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
51, 58
               

               
Conread position:
               
163-509
               

               
Cow position:
               
chr6:60473894-60474236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
57, 8
               

               
Conread position:
               
163-515
               

               
Cow position:
               
chr6:875566-875213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
51, 240
               

               
Conread position:
               
163-584
               

               
Cow position:
               
chr6:54867271-54867702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
52, 8
               

               
Conread position:
               
163-596
               

               
Cow position:
               
chr6:26915089-26915525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 125
               

               
Conread position:
               
163-626
               

               
Cow position:
               
chr6:12337744-12338216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 57
               

               
Conread position:
               
163-627
               

               
Cow position:
               
chr6:38853899-38853429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 245
               

               
Conread position:
               
163-630
               

               
Cow position:
               
chr6:41375513-41376000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
59, 8
               

               
Conread position:
               
163-643
               

               
Cow position:
               
chr6:21534818-21535283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
57, 111
               

               
Conread position:
               
163-646
               

               
Cow position:
               
chr6:29210261-29210723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
52, 34
               

               
Conread position:
               
163-659
               

               
Cow position:
               
chr6:66363485-66362972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
46, 58
               

               
Conread position:
               
163-660
               

               
Cow position:
               
chr6:17414694-17414192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 106
               

               
Conread position:
               
164-335
               

               
Cow position:
               
chr6:52002129-52002296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
58, 85
               

               
Conread position:
               
164-409
               

               
Cow position:
               
chr6:61575363-61575617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
164-418
               

               
Cow position:
               
chr6:55688800-55689057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
87, 52
               

               
Conread position:
               
164-437
               

               
Cow position:
               
chr6:42961608-42961323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
7, 58
               

               
Conread position:
               
164-455
               

               
Cow position:
               
chr6:36928412-36928713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 56
               

               
Conread position:
               
164-469
               

               
Cow position:
               
chr6:55388646-55388955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
164-657
               

               
Cow position:
               
chr6:26728766-26728289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 56
               

               
Conread position:
               
165-289
               

               
Cow position:
               
chr6:3591885-3592009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
57, 6
               

               
Conread position:
               
165-319
               

               
Cow position:
               
chr6:44016913-44016756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 108
               

               
Conread position:
               
165-328
               

               
Cow position:
               
chr6:2185593-2185428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 65
               

               
Conread position:
               
165-328
               

               
Cow position:
               
chr6:21311996-21311833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
53, 6
               

               
Conread position:
               
165-328
               

               
Cow position:
               
chr6:35769723-35769561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 58
               

               
Conread position:
               
165-328
               

               
Cow position:
               
chr6:36918413-36918254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 86
               

               
Conread position:
               
165-328
               

               
Cow position:
               
chr6:47150538-47150700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
165-331
               

               
Cow position:
               
chr6:53401130-53401288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
44, 56
               

               
Conread position:
               
165-339
               

               
Cow position:
               
chr6:24074807-24074629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
165-339
               

               
Cow position:
               
chr6:26837626-26837453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
9, 51
               

               
Conread position:
               
165-340
               

               
Cow position:
               
chr6:33147821-33147993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
63, 6
               

               
Conread position:
               
165-350
               

               
Cow position:
               
chr6:14827085-14827271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 106
               

               
Conread position:
               
165-370
               

               
Cow position:
               
chr6:60456590-60456795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
8, 139
               

               
Conread position:
               
165-387
               

               
Cow position:
               
chr6:50120026-50119802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
22, 6
               

               
Conread position:
               
165-420
               

               
Cow position:
               
chr6:8206096-8206355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
7, 77
               

               
Conread position:
               
165-426
               

               
Cow position:
               
chr6:6264406-6264663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
45, 6
               

               
Conread position:
               
165-442
               

               
Cow position:
               
chr6:3978902-3978623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
107, 51
               

               
Conread position:
               
165-446
               

               
Cow position:
               
chr6:58075987-58076273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 6
               

               
Conread position:
               
165-473
               

               
Cow position:
               
chr6:46628219-46627901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
11, 212
               

               
Conread position:
               
165-509
               

               
Cow position:
               
chr6:6181817-6181462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
7, 248
               

               
Conread position:
               
165-510
               

               
Cow position:
               
chr6:35103565-35103221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 6
               

               
Conread position:
               
165-513
               

               
Cow position:
               
chr6:6343185-6343540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
24, 116
               

               
Conread position:
               
165-513
               

               
Cow position:
               
chr6:16706769-16707122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
165-513
               

               
Cow position:
               
chr6:31525811-31526156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 6
               

               
Conread position:
               
165-600
               

               
Cow position:
               
chr6:8637034-8637478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 120
               

               
Conread position:
               
165-627
               

               
Cow position:
               
chr6:39358580-39358116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 132
               

               
Conread position:
               
165-627
               

               
Cow position:
               
chr6:54132578-54133038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 109
               

               
Conread position:
               
165-628
               

               
Cow position:
               
chr6:15305348-15305799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 6
               

               
Conread position:
               
165-631
               

               
Cow position:
               
chr6:63047335-63047807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
10, 113
               

               
Conread position:
               
165-642
               

               
Cow position:
               
chr6:32125826-32126294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
8, 58
               

               
Conread position:
               
165-659
               

               
Cow position:
               
chr6:13040214-13040710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 6
               

               
Conread position:
               
165-660
               

               
Cow position:
               
chr6:6201207-6201693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
165, 6
               

               
Conread position:
               
165-662
               

               
Cow position:
               
chr6:64431701-64432199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
58, 6
               

               
Conread position:
               
165-684
               

               
Cow position:
               
chr6:3952284-3952804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
166-318
               

               
Cow position:
               
chr6:56502071-56502221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 55
               

               
Conread position:
               
166-328
               

               
Cow position:
               
chr6:57777269-57777109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
10, 54
               

               
Conread position:
               
166-350
               

               
Cow position:
               
chr6:54947126-54947313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 64
               

               
Conread position:
               
166-477
               

               
Cow position:
               
chr6:52556712-52556406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
54, 63
               

               
Conread position:
               
166-509
               

               
Cow position:
               
chr6:3621873-3622223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
10, 216
               

               
Conread position:
               
169-334
               

               
Cow position:
               
chr6:55743145-55743312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
169-506
               

               
Cow position:
               
chr6:23117635-23117292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
5, 214
               

               
Conread position:
               
170-299
               

               
Cow position:
               
chr6:61443337-61443207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
52, 94
               

               
Conread position:
               
170-313
               

               
Cow position:
               
chr6:60673314-60673455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
170-327
               

               
Cow position:
               
chr6:16397416-16397266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
170-328
               

               
Cow position:
               
chr6:642811-642652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
42, 51
               

               
Conread position:
               
170-328
               

               
Cow position:
               
chr6:65676023-65676179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
170-328
               

               
Cow position:
               
chr6:65711593-65711749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
170-347
               

               
Cow position:
               
chr6:11637979-11637811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
161, 34
               

               
Conread position:
               
170-366
               

               
Cow position:
               
chr6:2607379-2607574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
53, 121
               

               
Conread position:
               
170-366
               

               
Cow position:
               
chr6:64449158-64449351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
50, 71
               

               
Conread position:
               
170-390
               

               
Cow position:
               
chr6:2012785-2013006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
52, 113
               

               
Conread position:
               
170-407
               

               
Cow position:
               
chr6:1891079-1890841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
44, 55
               

               
Conread position:
               
170-415
               

               
Cow position:
               
chr6:8318400-8318150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
56, 120
               

               
Conread position:
               
170-443
               

               
Cow position:
               
chr6:22877388-22877116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
161, 17
               

               
Conread position:
               
170-452
               

               
Cow position:
               
chr6:16410962-16411238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
44, 50
               

               
Conread position:
               
170-455
               

               
Cow position:
               
chr6:16737787-16738071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 50
               

               
Conread position:
               
170-499
               

               
Cow position:
               
chr6:1944497-1944809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
226, 46
               

               
Conread position:
               
170-509
               

               
Cow position:
               
chr6:54980868-54981215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
45, 241
               

               
Conread position:
               
170-512
               

               
Cow position:
               
chr6:5302636-5302311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 12
               

               
Conread position:
               
170-555
               

               
Cow position:
               
chr6:11169474-11169847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
92, 44
               

               
Conread position:
               
170-565
               

               
Cow position:
               
chr6:25407630-25407225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
46, 117
               

               
Conread position:
               
170-619
               

               
Cow position:
               
chr6:28482781-28483236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 232
               

               
Conread position:
               
170-622
               

               
Cow position:
               
chr6:65870790-65871253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 51
               

               
Conread position:
               
170-627
               

               
Cow position:
               
chr6:1770429-1769967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
170-627
               

               
Cow position:
               
chr6:34196382-34195935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
44, 51
               

               
Conread position:
               
170-655
               

               
Cow position:
               
chr6:52431266-52430765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 46
               

               
Conread position:
               
170-659
               

               
Cow position:
               
chr6:10176535-10176035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 49
               

               
Conread position:
               
170-661
               

               
Cow position:
               
chr6:33302176-33302656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
45, 106
               

               
Conread position:
               
170-689
               

               
Cow position:
               
chr6:16700025-16700545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
50, 38
               

               
Conread position:
               
171-482
               

               
Cow position:
               
chr6:22788222-22788538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 130
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr6:34204028-34204183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
60, 47
               

               
Conread position:
               
172-513
               

               
Cow position:
               
chr6:14958581-14958230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
18, 26
               

               
Conread position:
               
172-638
               

               
Cow position:
               
chr6:34475775-34475320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
158, 48
               

               
Conread position:
               
173-326
               

               
Cow position:
               
chr6:30285458-30285613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
173-328
               

               
Cow position:
               
chr6:61978412-61978257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 151
               

               
Conread position:
               
173-342
               

               
Cow position:
               
chr6:53448817-53448988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
173-366
               

               
Cow position:
               
chr6:46274696-46274500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-394
               

               
Cow position:
               
chr6:180594-180375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
171, 43
               

               
Conread position:
               
173-395
               

               
Cow position:
               
chr6:54885144-54884918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
45, 111
               

               
Conread position:
               
173-410
               

               
Cow position:
               
chr6:69500099-69500332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
49, 79
               

               
Conread position:
               
173-423
               

               
Cow position:
               
chr6:56441161-56440906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
46, 156
               

               
Conread position:
               
173-427
               

               
Cow position:
               
chr6:19427218-19427477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
52, 248
               

               
Conread position:
               
173-432
               

               
Cow position:
               
chr6:8527065-8527329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-432
               

               
Cow position:
               
chr6:10045125-10045388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-449
               

               
Cow position:
               
chr6:14886908-14886627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-449
               

               
Cow position:
               
chr6:25376177-25376459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 236
               

               
Conread position:
               
173-449
               

               
Cow position:
               
chr6:32298699-32298419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-452
               

               
Cow position:
               
chr6:20231056-20230777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
49, 56
               

               
Conread position:
               
173-454
               

               
Cow position:
               
chr6:508417-508703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-454
               

               
Cow position:
               
chr6:43430094-43429808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-470
               

               
Cow position:
               
chr6:21857654-21857956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-470
               

               
Cow position:
               
chr6:32054769-32054467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-470
               

               
Cow position:
               
chr6:41622942-41622640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
173-482
               

               
Cow position:
               
chr6:8195060-8195375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
47, 130
               

               
Conread position:
               
173-509
               

               
Cow position:
               
chr6:47383770-47384112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 226
               

               
Conread position:
               
173-534
               

               
Cow position:
               
chr6:28811226-28810869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 94
               

               
Conread position:
               
173-607
               

               
Cow position:
               
chr6:50983977-50984432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
51, 144
               

               
Conread position:
               
173-622
               

               
Cow position:
               
chr6:13688042-13687594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 111
               

               
Conread position:
               
173-625
               

               
Cow position:
               
chr6:29239712-29240157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
47, 99
               

               
Conread position:
               
173-628
               

               
Cow position:
               
chr6:51835169-51835626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
36, 48
               

               
Conread position:
               
173-656
               

               
Cow position:
               
chr6:35181484-35180998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 101
               

               
Conread position:
               
173-656
               

               
Cow position:
               
chr6:61269099-61269574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 86
               

               
Conread position:
               
173-661
               

               
Cow position:
               
chr6:40031963-40032454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 46
               

               
Conread position:
               
173-671
               

               
Cow position:
               
chr6:32121680-32122162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 48
               

               
Conread position:
               
174-328
               

               
Cow position:
               
chr6:5501022-5500867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
174-328
               

               
Cow position:
               
chr6:22804597-22804443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
33, 134
               

               
Conread position:
               
174-350
               

               
Cow position:
               
chr6:54202124-54201946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
174-461
               

               
Cow position:
               
chr6:7449415-7449707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
34, 127
               

               
Conread position:
               
175-319
               

               
Cow position:
               
chr6:5673000-5673145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
175-335
               

               
Cow position:
               
chr6:1467990-1467829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
175-342
               

               
Cow position:
               
chr6:60467799-60467959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
175-367
               

               
Cow position:
               
chr6:45160520-45160334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
175-413
               

               
Cow position:
               
chr6:57685930-57686164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
175-450
               

               
Cow position:
               
chr6:53710889-53711162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
194, 41
               

               
Conread position:
               
175-474
               

               
Cow position:
               
chr6:20945591-20945896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 54
               

               
Conread position:
               
175-512
               

               
Cow position:
               
chr6:3929092-3929427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
40, 45
               

               
Conread position:
               
175-513
               

               
Cow position:
               
chr6:38614595-38614922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
45, 99
               

               
Conread position:
               
175-532
               

               
Cow position:
               
chr6:130393-130035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 45
               

               
Conread position:
               
175-600
               

               
Cow position:
               
chr6:61631848-61631404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
39, 46
               

               
Conread position:
               
175-655
               

               
Cow position:
               
chr6:7994699-7994207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
51, 119
               

               
Conread position:
               
176-325
               

               
Cow position:
               
chr6:55456107-55455957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
176-326
               

               
Cow position:
               
chr6:40137293-40137142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 44
               

               
Conread position:
               
176-328
               

               
Cow position:
               
chr6:41152422-41152571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
176-328
               

               
Cow position:
               
chr6:51071482-51071633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 44
               

               
Conread position:
               
176-334
               

               
Cow position:
               
chr6:30315285-30315129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
176-335
               

               
Cow position:
               
chr6:42693137-42693294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
142, 43
               

               
Conread position:
               
176-339
               

               
Cow position:
               
chr6:39954459-39954623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
176-362
               

               
Cow position:
               
chr6:6164425-6164608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 48
               

               
Conread position:
               
176-364
               

               
Cow position:
               
chr6:34235661-34235477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
37, 45
               

               
Conread position:
               
176-366
               

               
Cow position:
               
chr6:388943-389129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
39, 69
               

               
Conread position:
               
176-367
               

               
Cow position:
               
chr6:2582647-2582831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
176-383
               

               
Cow position:
               
chr6:14201470-14201681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
33, 45
               

               
Conread position:
               
176-425
               

               
Cow position:
               
chr6:7824535-7824784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
191, 43
               

               
Conread position:
               
176-470
               

               
Cow position:
               
chr6:14163787-14163490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr6:32420907-32421253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
42, 259
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr6:63286738-63286399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
51, 40
               

               
Conread position:
               
176-513
               

               
Cow position:
               
chr6:57164202-57164539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
166, 40
               

               
Conread position:
               
176-513
               

               
Cow position:
               
chr6:60350527-60350182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
176-514
               

               
Cow position:
               
chr6:8209817-8209494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
47, 107
               

               
Conread position:
               
176-562
               

               
Cow position:
               
chr6:31635910-31635529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
176-562
               

               
Cow position:
               
chr6:65903844-65903461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 44
               

               
Conread position:
               
176-637
               

               
Cow position:
               
chr6:67950731-67951194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
46, 109
               

               
Conread position:
               
176-645
               

               
Cow position:
               
chr6:4383265-4383719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 97
               

               
Conread position:
               
176-645
               

               
Cow position:
               
chr6:44078294-44078760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
39, 44
               

               
Conread position:
               
176-656
               

               
Cow position:
               
chr6:60144405-60143945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
33, 45
               

               
Conread position:
               
176-661
               

               
Cow position:
               
chr6:5095778-5095276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
46, 108
               

               
Conread position:
               
176-666
               

               
Cow position:
               
chr6:16103430-16102926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
35, 45
               

               
Conread position:
               
176-669
               

               
Cow position:
               
chr6:9008840-9008355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
5, 108
               

               
Conread position:
               
177-326
               

               
Cow position:
               
chr6:55659944-55659795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
177-342
               

               
Cow position:
               
chr6:9453883-9454037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
177-377
               

               
Cow position:
               
chr6:51398574-51398771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
45, 99
               

               
Conread position:
               
177-422
               

               
Cow position:
               
chr6:59302051-59301805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
177-455
               

               
Cow position:
               
chr6:25773608-25773333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
45, 113
               

               
Conread position:
               
177-459
               

               
Cow position:
               
chr6:9322932-9323205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
32, 44
               

               
Conread position:
               
177-480
               

               
Cow position:
               
chr6:21542093-21542400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
45, 112
               

               
Conread position:
               
177-512
               

               
Cow position:
               
chr6:63197398-63197054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
36, 49
               

               
Conread position:
               
178-328
               

               
Cow position:
               
chr6:66087729-66087875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 91
               

               
Conread position:
               
178-366
               

               
Cow position:
               
chr6:20605708-20605895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
178-493
               

               
Cow position:
               
chr6:60239614-60239303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
150, 28
               

               
Conread position:
               
178-525
               

               
Cow position:
               
chr6:10695643-10695982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
44, 54
               

               
Conread position:
               
178-649
               

               
Cow position:
               
chr6:13367069-13367532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
33, 43
               

               
Conread position:
               
179-480
               

               
Cow position:
               
chr6:44098860-44099163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
34, 41
               

               
Conread position:
               
179-506
               

               
Cow position:
               
chr6:21230741-21231076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
35, 247
               

               
Conread position:
               
179-512
               

               
Cow position:
               
chr6:54140589-54140906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 41
               

               
Conread position:
               
179-525
               

               
Cow position:
               
chr6:7131096-7130758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
36, 95
               

               
Conread position:
               
180-512
               

               
Cow position:
               
chr6:51893737-51893391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
34, 252
               

               
Conread position:
               
180-627
               

               
Cow position:
               
chr6:38207719-38207259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 40
               

               
Conread position:
               
181-328
               

               
Cow position:
               
chr6:24649625-24649775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
181-452
               

               
Cow position:
               
chr6:10254019-10254290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
182-330
               

               
Cow position:
               
chr6:55344704-55344557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 117
               

               
Conread position:
               
182-366
               

               
Cow position:
               
chr6:27110369-27110553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
70, 33
               

               
Conread position:
               
182-452
               

               
Cow position:
               
chr6:49685363-49685634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 39
               

               
Conread position:
               
182-562
               

               
Cow position:
               
chr6:37148975-37149353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
182-627
               

               
Cow position:
               
chr6:35539721-35539270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 39
               

               
Conread position:
               
182-628
               

               
Cow position:
               
chr6:41733405-41733863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 92
               

               
Conread position:
               
183-317
               

               
Cow position:
               
chr6:42839945-42840075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
183-319
               

               
Cow position:
               
chr6:51191594-51191730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
78, 36
               

               
Conread position:
               
183-322
               

               
Cow position:
               
chr6:24557416-24557551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
183-328
               

               
Cow position:
               
chr6:6117770-6117629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 38
               

               
Conread position:
               
183-328
               

               
Cow position:
               
chr6:60781669-60781525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
183-328
               

               
Cow position:
               
chr6:64436551-64436406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
183-334
               

               
Cow position:
               
chr6:6701489-6701336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 137
               

               
Conread position:
               
183-335
               

               
Cow position:
               
chr6:9026296-9026445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 103
               

               
Conread position:
               
183-335
               

               
Cow position:
               
chr6:44511018-44511173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
37, 102
               

               
Conread position:
               
183-342
               

               
Cow position:
               
chr6:7253647-7253487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
183-347
               

               
Cow position:
               
chr6:65846668-65846504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
183-388
               

               
Cow position:
               
chr6:30826255-30826054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
109, 36
               

               
Conread position:
               
183-395
               

               
Cow position:
               
chr6:24902362-24902152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
183-399
               

               
Cow position:
               
chr6:10332317-10332093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 135
               

               
Conread position:
               
183-401
               

               
Cow position:
               
chr6:39994682-39994462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
39, 179
               

               
Conread position:
               
183-406
               

               
Cow position:
               
chr6:60931121-60930895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 128
               

               
Conread position:
               
183-415
               

               
Cow position:
               
chr6:20379686-20379455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 106
               

               
Conread position:
               
183-425
               

               
Cow position:
               
chr6:10635956-10636196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
183-432
               

               
Cow position:
               
chr6:56902643-56902894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
27, 38
               

               
Conread position:
               
183-454
               

               
Cow position:
               
chr6:57384299-57384572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
39, 119
               

               
Conread position:
               
183-455
               

               
Cow position:
               
chr6:67304581-67304857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 37
               

               
Conread position:
               
183-513
               

               
Cow position:
               
chr6:28977252-28976930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
34, 104
               

               
Conread position:
               
183-513
               

               
Cow position:
               
chr6:38218451-38218776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
183-523
               

               
Cow position:
               
chr6:45065227-45064897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 38
               

               
Conread position:
               
183-551
               

               
Cow position:
               
chr6:9452990-9452625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 31
               

               
Conread position:
               
183-563
               

               
Cow position:
               
chr6:38440961-38441337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
183-566
               

               
Cow position:
               
chr6:53651818-53652208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
6, 110
               

               
Conread position:
               
183-617
               

               
Cow position:
               
chr6:14949702-14949263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
32, 112
               

               
Conread position:
               
183-626
               

               
Cow position:
               
chr6:36202607-36203047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 90
               

               
Conread position:
               
183-626
               

               
Cow position:
               
chr6:44194766-44194330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 97
               

               
Conread position:
               
183-627
               

               
Cow position:
               
chr6:15938069-15937625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
102, 22
               

               
Conread position:
               
183-627
               

               
Cow position:
               
chr6:53460792-53460344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 89
               

               
Conread position:
               
183-642
               

               
Cow position:
               
chr6:66433727-66434196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
183-644
               

               
Cow position:
               
chr6:49421997-49421552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
213, 69
               

               
Conread position:
               
183-644
               

               
Cow position:
               
chr6:54490961-54490502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
183-704
               

               
Cow position:
               
chr6:15301038-15300539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
32, 103
               

               
Conread position:
               
184-356
               

               
Cow position:
               
chr6:21184736-21184907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 95
               

               
Conread position:
               
184-417
               

               
Cow position:
               
chr6:1907319-1907556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
184-459
               

               
Cow position:
               
chr6:34031448-34031717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 89
               

               
Conread position:
               
184-509
               

               
Cow position:
               
chr6:63272833-63272505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 237
               

               
Conread position:
               
184-513
               

               
Cow position:
               
chr6:899504-899183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
25, 37
               

               
Conread position:
               
184-513
               

               
Cow position:
               
chr6:35613629-35613307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
210, 32
               

               
Conread position:
               
184-563
               

               
Cow position:
               
chr6:37199769-37199373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
25, 306
               

               
Conread position:
               
184-593
               

               
Cow position:
               
chr6:36470783-36470377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
184-644
               

               
Cow position:
               
chr6:611341-611788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
185-318
               

               
Cow position:
               
chr6:41678352-41678481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
185-330
               

               
Cow position:
               
chr6:62486148-62486004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
29, 40
               

               
Conread position:
               
185-334
               

               
Cow position:
               
chr6:9523090-9522940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
185-365
               

               
Cow position:
               
chr6:7694572-7694390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
29, 35
               

               
Conread position:
               
185-368
               

               
Cow position:
               
chr6:15266488-15266307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 107
               

               
Conread position:
               
185-395
               

               
Cow position:
               
chr6:48573101-48572891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 21
               

               
Conread position:
               
185-459
               

               
Cow position:
               
chr6:22968855-22969139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
16, 200
               

               
Conread position:
               
185-479
               

               
Cow position:
               
chr6:68049217-68049507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
29, 35
               

               
Conread position:
               
185-507
               

               
Cow position:
               
chr6:35415740-35415411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 51
               

               
Conread position:
               
185-513
               

               
Cow position:
               
chr6:23248182-23247856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 173
               

               
Conread position:
               
185-644
               

               
Cow position:
               
chr6:17090380-17090825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
172, 23
               

               
Conread position:
               
185-645
               

               
Cow position:
               
chr6:55282508-55282042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 79
               

               
Conread position:
               
185-653
               

               
Cow position:
               
chr6:51581478-51581003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 201
               

               
Conread position:
               
185-657
               

               
Cow position:
               
chr6:7190338-7189875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 98
               

               
Conread position:
               
185-661
               

               
Cow position:
               
chr6:24468611-24468140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 61
               

               
Conread position:
               
185-663
               

               
Cow position:
               
chr6:15243031-15243522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 10
               

               
Conread position:
               
186-374
               

               
Cow position:
               
chr6:20255604-20255422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
36, 63
               

               
Conread position:
               
186-406
               

               
Cow position:
               
chr6:15923215-15922995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
171, 33
               

               
Conread position:
               
186-455
               

               
Cow position:
               
chr6:5445411-5445675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
186-504
               

               
Cow position:
               
chr6:16423481-16423803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
186-510
               

               
Cow position:
               
chr6:24004335-24004643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
191, 30
               

               
Conread position:
               
187-367
               

               
Cow position:
               
chr6:21110752-21110925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
33, 97
               

               
Conread position:
               
187-451
               

               
Cow position:
               
chr6:48344111-48344381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
187-455
               

               
Cow position:
               
chr6:6460325-6460594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 28
               

               
Conread position:
               
187-522
               

               
Cow position:
               
chr6:60442202-60442527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
142, 78
               

               
Conread position:
               
187-625
               

               
Cow position:
               
chr6:45690810-45690393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
187-639
               

               
Cow position:
               
chr6:5609657-5609203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 98
               

               
Conread position:
               
187-659
               

               
Cow position:
               
chr6:8965873-8966348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 176
               

               
Conread position:
               
187-665
               

               
Cow position:
               
chr6:50090423-50090905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 175
               

               
Conread position:
               
188-328
               

               
Cow position:
               
chr6:12739365-12739503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
188-328
               

               
Cow position:
               
chr6:50504740-50504879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
64, 36
               

               
Conread position:
               
188-366
               

               
Cow position:
               
chr6:42931327-42931146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
188-491
               

               
Cow position:
               
chr6:3575226-3575530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 33
               

               
Conread position:
               
188-509
               

               
Cow position:
               
chr6:52562390-52562074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
30, 183
               

               
Conread position:
               
188-511
               

               
Cow position:
               
chr6:1886879-1886559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
8, 15
               

               
Conread position:
               
188-645
               

               
Cow position:
               
chr6:29484878-29485328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
208, 10
               

               
Conread position:
               
189-335
               

               
Cow position:
               
chr6:55366538-55366389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
189-347
               

               
Cow position:
               
chr6:66453586-66453740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 26
               

               
Conread position:
               
189-432
               

               
Cow position:
               
chr6:61130697-61130448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
25, 32
               

               
Conread position:
               
189-644
               

               
Cow position:
               
chr6:17997530-17997073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
189-676
               

               
Cow position:
               
chr6:7539358-7539850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
33, 95
               

               
Conread position:
               
190-366
               

               
Cow position:
               
chr6:59015776-59015599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 94
               

               
Conread position:
               
190-418
               

               
Cow position:
               
chr6:59620455-59620685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
30, 93
               

               
Conread position:
               
190-509
               

               
Cow position:
               
chr6:65702615-65702307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
191-327
               

               
Cow position:
               
chr6:33311259-33311394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 95
               

               
Conread position:
               
191-492
               

               
Cow position:
               
chr6:24961932-24962234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 159
               

               
Conread position:
               
191-513
               

               
Cow position:
               
chr6:21869858-21869539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
23, 30
               

               
Conread position:
               
191-657
               

               
Cow position:
               
chr6:38771083-38771530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
159, 28
               

               
Conread position:
               
192-324
               

               
Cow position:
               
chr6:2896539-2896670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
192-444
               

               
Cow position:
               
chr6:24515405-24515157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
192-455
               

               
Cow position:
               
chr6:13592498-13592761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
192-572
               

               
Cow position:
               
chr6:6400741-6401124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
192-655
               

               
Cow position:
               
chr6:4468535-4469021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
28, 122
               

               
Conread position:
               
192-667
               

               
Cow position:
               
chr6:28084228-28083763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
30, 73
               

               
Conread position:
               
193-456
               

               
Cow position:
               
chr6:64303860-64303592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
33, 209
               

               
Conread position:
               
193-652
               

               
Cow position:
               
chr6:23532452-23532898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
29, 85
               

               
Conread position:
               
194-348
               

               
Cow position:
               
chr6:44377056-44377209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
20, 26
               

               
Conread position:
               
197-328
               

               
Cow position:
               
chr6:31260780-31260912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
197-367
               

               
Cow position:
               
chr6:54864873-54864710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
197-395
               

               
Cow position:
               
chr6:58439761-58439953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
197-455
               

               
Cow position:
               
chr6:47988983-47989224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
197-455
               

               
Cow position:
               
chr6:61137158-61137427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
17, 138
               

               
Conread position:
               
197-462
               

               
Cow position:
               
chr6:12629818-12630080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
133, 78
               

               
Conread position:
               
197-619
               

               
Cow position:
               
chr6:19695600-19696028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
124, 87
               

               
Conread position:
               
198-395
               

               
Cow position:
               
chr6:6098488-6098291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
198-513
               

               
Cow position:
               
chr6:38641292-38641602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
24, 87
               

               
Conread position:
               
200-522
               

               
Cow position:
               
chr6:67456499-67456838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
20, 15
               

               
Conread position:
               
200-627
               

               
Cow position:
               
chr6:21231332-21231739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 85
               

               
Conread position:
               
201-327
               

               
Cow position:
               
chr6:89112-88984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
201-508
               

               
Cow position:
               
chr6:20157122-20157438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
201-513
               

               
Cow position:
               
chr6:51463819-51463523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
20, 149
               

               
Conread position:
               
201-513
               

               
Cow position:
               
chr6:66131105-66131416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
21, 72
               

               
Conread position:
               
201-617
               

               
Cow position:
               
chr6:445108-445545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
202-347
               

               
Cow position:
               
chr6:22986192-22986049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
13, 18
               

               
Conread position:
               
202-367
               

               
Cow position:
               
chr6:52025857-52025692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
202-480
               

               
Cow position:
               
chr6:14850917-14850637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
18, 82
               

               
Conread position:
               
202-523
               

               
Cow position:
               
chr6:36652220-36652542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
165, 13
               

               
Conread position:
               
202-528
               

               
Cow position:
               
chr6:528478-528159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
202-644
               

               
Cow position:
               
chr6:10400097-10399664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
20, 81
               

               
Conread position:
               
203-367
               

               
Cow position:
               
chr6:46245524-46245357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
6, 18
               

               
Conread position:
               
203-520
               

               
Cow position:
               
chr6:59069829-59069507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
17, 291
               

               
Conread position:
               
204-335
               

               
Cow position:
               
chr6:33918049-33917919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
204-413
               

               
Cow position:
               
chr6:58732513-58732295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
204-644
               

               
Cow position:
               
chr6:53024998-53024567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
205-512
               

               
Cow position:
               
chr6:30973844-30974151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
96, 17
               

               
Conread position:
               
206-480
               

               
Cow position:
               
chr6:415897-416185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
206-512
               

               
Cow position:
               
chr6:22503120-22502802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
104, 211
               

               
Conread position:
               
206-513
               

               
Cow position:
               
chr6:46865791-46865482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
12, 59
               

               
Conread position:
               
207-328
               

               
Cow position:
               
chr6:17246033-17245914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
207-509
               

               
Cow position:
               
chr6:12092180-12091887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
161, 68
               

               
Conread position:
               
208-328
               

               
Cow position:
               
chr6:20929902-20929782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
208-361
               

               
Cow position:
               
chr6:21812533-21812685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
12, 74
               

               
Conread position:
               
208-415
               

               
Cow position:
               
chr6:33276845-33277054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
208-455
               

               
Cow position:
               
chr6:53731324-53731576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 78
               

               
Conread position:
               
208-618
               

               
Cow position:
               
chr6:63720005-63720410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
159, 11
               

               
Conread position:
               
208-638
               

               
Cow position:
               
chr6:7128597-7128166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
39, 69
               

               
Conread position:
               
208-644
               

               
Cow position:
               
chr6:53139123-53138694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
208-655
               

               
Cow position:
               
chr6:21456884-21456421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
159, 11
               

               
Conread position:
               
209-328
               

               
Cow position:
               
chr6:57680629-57680509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
210-452
               

               
Cow position:
               
chr6:8187711-8187471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 9
               

               
Conread position:
               
210-507
               

               
Cow position:
               
chr6:37467731-37467436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
120, 9
               

               
Conread position:
               
210-620
               

               
Cow position:
               
chr6:52412659-52413082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
10, 243
               

               
Conread position:
               
210-625
               

               
Cow position:
               
chr6:46292533-46292130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
10, 65
               

               
Conread position:
               
211-656
               

               
Cow position:
               
chr6:67187497-67187934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
9, 49
               

               
Conread position:
               
211-660
               

               
Cow position:
               
chr6:1703622-1704058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
173, 143
               

               
Conread position:
               
211-660
               

               
Cow position:
               
chr6:44566220-44566684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
119, 200
               

               
Conread position:
               
217-519
               

               
Cow position:
               
chr6:1499452-1499759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
149, 86
               

               
Conread position:
               
218-377
               

               
Cow position:
               
chr6:37603338-37603495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
132, 55
               

               
Conread position:
               
218-512
               

               
Cow position:
               
chr6:35993391-35993693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 169
               

               
Conread position:
               
218-513
               

               
Cow position:
               
chr6:25008529-25008829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
143, 64
               

               
Conread position:
               
219-395
               

               
Cow position:
               
chr6:37246614-37246438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 133
               

               
Conread position:
               
219-481
               

               
Cow position:
               
chr6:53519807-53519546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
111, 69
               

               
Conread position:
               
219-525
               

               
Cow position:
               
chr6:8788221-8787915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
119, 79
               

               
Conread position:
               
219-563
               

               
Cow position:
               
chr6:47799114-47799458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
117, 39
               

               
Conread position:
               
219-627
               

               
Cow position:
               
chr6:63252107-63251694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
119, 56
               

               
Conread position:
               
219-662
               

               
Cow position:
               
chr6:50577336-50577777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
42, 37
               

               
Conread position:
               
220-501
               

               
Cow position:
               
chr6:67968797-67968512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
220-651
               

               
Cow position:
               
chr6:12668921-12669349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
221-530
               

               
Cow position:
               
chr6:26910051-26909746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
113, 54
               

               
Conread position:
               
221-656
               

               
Cow position:
               
chr6:47574723-47575145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
142, 66
               

               
Conread position:
               
225-522
               

               
Cow position:
               
chr6:54936399-54936699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
227-643
               

               
Cow position:
               
chr6:18105478-18105885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
103, 50
               

               
Conread position:
               
228-616
               

               
Cow position:
               
chr6:8125157-8125545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
102, 55
               

               
Conread position:
               
229-652
               

               
Cow position:
               
chr6:60819341-60819767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
230-659
               

               
Cow position:
               
chr6:19264673-19264245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 57
               

               
Conread position:
               
230-686
               

               
Cow position:
               
chr6:11246591-11247056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
120, 42
               

               
Conread position:
               
231-626
               

               
Cow position:
               
chr6:47355652-47356052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
166, 51
               

               
Conread position:
               
235-394
               

               
Cow position:
               
chr6:59249849-59249692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
130, 102
               

               
Conread position:
               
236-564
               

               
Cow position:
               
chr6:47640604-47640277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
127, 113
               

               
Conread position:
               
236-677
               

               
Cow position:
               
chr6:15447375-15446917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 378
               

               
Conread position:
               
238-459
               

               
Cow position:
               
chr6:40834638-40834412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
239-452
               

               
Cow position:
               
chr6:44984162-44984379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
91, 53
               

               
Conread position:
               
240-691
               

               
Cow position:
               
chr6:26450154-26450590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
121, 109
               

               
Conread position:
               
241-506
               

               
Cow position:
               
chr6:24934792-24934523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
89, 182
               

               
Conread position:
               
241-531
               

               
Cow position:
               
chr6:12543095-12542801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
109, 44
               

               
Conread position:
               
242-455
               

               
Cow position:
               
chr6:633522-633305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
88, 180
               

               
Conread position:
               
243-658
               

               
Cow position:
               
chr6:27888188-27888602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
93, 62
               

               
Conread position:
               
243-671
               

               
Cow position:
               
chr6:120079-120506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
109, 86
               

               
Conread position:
               
244-585
               

               
Cow position:
               
chr6:48112045-48112382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
108, 38
               

               
Conread position:
               
245-522
               

               
Cow position:
               
chr6:58590116-58590393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 102
               

               
Conread position:
               
248-513
               

               
Cow position:
               
chr6:61608352-61608622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
253-512
               

               
Cow position:
               
chr6:4692134-4691866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
253-518
               

               
Cow position:
               
chr6:582426-582157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
253-627
               

               
Cow position:
               
chr6:48010675-48010297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
77, 128
               

               
Conread position:
               
255-513
               

               
Cow position:
               
chr6:46283146-46282894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
141, 34
               

               
Conread position:
               
257-627
               

               
Cow position:
               
chr6:19755223-19754851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
94, 72
               

               
Conread position:
               
260-618
               

               
Cow position:
               
chr6:57571330-57571697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
97, 313
               

               
Conread position:
               
260-670
               

               
Cow position:
               
chr6:17313587-17314004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
107, 131
               

               
Conread position:
               
261-627
               

               
Cow position:
               
chr6:67618101-67617720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 119
               

               
Conread position:
               
261-639
               

               
Cow position:
               
chr6:38609826-38610213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 24
               

               
Conread position:
               
267-627
               

               
Cow position:
               
chr6:60118010-60118369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
268-662
               

               
Cow position:
               
chr6:21399892-21399489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 103
               

               
Conread position:
               
270-596
               

               
Cow position:
               
chr6:38640094-38640431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
271-622
               

               
Cow position:
               
chr6:29000058-28999735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
125, 30
               

               
Conread position:
               
272-627
               

               
Cow position:
               
chr6:19446124-19446480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
126, 87
               

               
Conread position:
               
275-638
               

               
Cow position:
               
chr6:53841631-53841265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
86, 74
               

               
Conread position:
               
276-623
               

               
Cow position:
               
chr6:60739884-60740233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
60, 133
               

               
Conread position:
               
276-662
               

               
Cow position:
               
chr6:9219142-9219524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
58, 102
               

               
Conread position:
               
281-479
               

               
Cow position:
               
chr6:37376643-37376438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
285-519
               

               
Cow position:
               
chr6:50975936-50976164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
111, 73
               

               
Conread position:
               
285-626
               

               
Cow position:
               
chr6:7119732-7119404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
111, 64
               

               
Conread position:
               
285-670
               

               
Cow position:
               
chr6:43135066-43134672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
285-691
               

               
Cow position:
               
chr6:35725973-35726377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 242
               

               
Conread position:
               
291-512
               

               
Cow position:
               
chr6:58597620-58597397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
81, 91
               

               
Conread position:
               
297-673
               

               
Cow position:
               
chr6:59603317-59602939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
46, 64
               

               
Conread position:
               
351-626
               

               
Cow position:
               
chr6:2584890-2585167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
47, 16
               

               
Conread position:
               
351-660
               

               
Cow position:
               
chr6:3350968-3351288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
355-662
               

               
Cow position:
               
chr6:60468190-60468491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 8
               

               
Conread position:
               
360-686
               

               
Cow position:
               
chr6:37395451-37395119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 209
               

               
Conread position:
               
379-638
               

               
Cow position:
               
chr6:50504429-50504694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 28
               
Show alignments to all cow chromosomes.