Cow genome map

Conread name: Ss1.1-Pig3-SRG8023B06.5

Conread position: 3-477
Cow position: chr12:35656939-35656467 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 116

Conread position: 3-485
Cow position: chr12:1502014-1502494 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 116

Conread position: 7-477
Cow position: chr12:20251778-20252234 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 106

Conread position: 7-477
Cow position: chr12:26032971-26032514 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 106

Conread position: 7-480
Cow position: chr12:11271545-11271998 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 111

Conread position: 7-480
Cow position: chr12:32673014-32673486 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 110

Conread position: 11-328
Cow position: chr12:28458577-28458881 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 62

Conread position: 11-474
Cow position: chr12:18510716-18511147 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 11-477
Cow position: chr12:38718912-38718464 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 62

Conread position: 11-576
Cow position: chr12:10072286-10071722 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 62

Conread position: 11-576
Cow position: chr12:13892168-13891618 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 62

Conread position: 11-576
Cow position: chr12:15943023-15942452 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 75

Conread position: 11-576
Cow position: chr12:26365657-26365103 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 11-576
Cow position: chr12:27765361-27765910 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 11-576
Cow position: chr12:36590561-36589990 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 11-576
Cow position: chr12:42781447-42780874 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 62

Conread position: 11-576
Cow position: chr12:48398883-48398333 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 62

Conread position: 11-588
Cow position: chr12:1020029-1020598 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 47

Conread position: 32-576
Cow position: chr12:10423361-10423906 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 31

Conread position: 77-581
Cow position: chr12:1169537-1170018 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 41

Conread position: 119-576
Cow position: chr12:3837918-3838357 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 341
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 10, 57

Conread position: 215-477
Cow position: chr12:28055076-28054805 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 10, 49

Conread position: 215-477
Cow position: chr12:36166967-36167237 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 10, 95

Conread position: 256-480
Cow position: chr12:27780285-27780079 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 130, 24

Show alignments to all cow chromosomes.