Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8023B06.5 |
| Conread position: | 1-456 |
| Cow position: | chr14:3102393-3101929 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 31 |
| Conread position: | 3-477 |
| Cow position: | chr14:2340328-2340793 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 25 |
| Conread position: | 3-477 |
| Cow position: | chr14:26873067-26873535 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 115 |
| Conread position: | 3-477 |
| Cow position: | chr14:39547444-39546988 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 116 |
| Conread position: | 3-477 |
| Cow position: | chr14:44556272-44556744 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 117 |
| Conread position: | 3-478 |
| Cow position: | chr14:8211883-8212337 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 115 |
| Conread position: | 3-485 |
| Cow position: | chr14:42771872-42771403 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 25 |
| Conread position: | 11-259 |
| Cow position: | chr14:828955-829206 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 81, 32 |
| Conread position: | 11-361 |
| Cow position: | chr14:48166668-48166330 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 253 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-370 |
| Cow position: | chr14:44512532-44512886 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-390 |
| Cow position: | chr14:48534395-48534019 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-480 |
| Cow position: | chr14:50395449-50395012 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-482 |
| Cow position: | chr14:8207273-8206822 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 47 |
| Conread position: | 11-571 |
| Cow position: | chr14:23456578-23457143 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-576 |
| Cow position: | chr14:1525742-1526314 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-576 |
| Cow position: | chr14:17958581-17959131 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-576 |
| Cow position: | chr14:22882188-22882747 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 68 |
| Conread position: | 11-576 |
| Cow position: | chr14:23628678-23629228 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-576 |
| Cow position: | chr14:32457014-32456470 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 406 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-576 |
| Cow position: | chr14:43097471-43096921 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 32 |
| Conread position: | 11-576 |
| Cow position: | chr14:47872188-47871617 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 32 |
| Conread position: | 11-576 |
| Cow position: | chr14:48685753-48686319 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-576 |
| Cow position: | chr14:50586250-50585700 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 23-485 |
| Cow position: | chr14:25756667-25756227 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 68 |
| Conread position: | 67-477 |
| Cow position: | chr14:15377336-15377736 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 51 |
| Conread position: | 72-576 |
| Cow position: | chr14:1118970-1119482 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 10 |
| Conread position: | 124-481 |
| Cow position: | chr14:13133332-13133701 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 51 |
| Conread position: | 130-384 |
| Cow position: | chr14:17639165-17639397 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 219, 44 |
| Conread position: | 130-576 |
| Cow position: | chr14:10909976-10909545 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 88 |
| Conread position: | 130-576 |
| Cow position: | chr14:21769061-21769494 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 44 |
| Conread position: | 188-576 |
| Cow position: | chr14:38827726-38827369 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 274 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 194, 29 |
| Conread position: | 197-477 |
| Cow position: | chr14:32221710-32221998 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 25, 113 |
| Conread position: | 215-477 |
| Cow position: | chr14:8765482-8765211 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 10, 96 |
| Conread position: | 215-477 |
| Cow position: | chr14:8781557-8781286 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 10, 96 |
| Conread position: | 215-477 |
| Cow position: | chr14:16257860-16258130 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 10, 96 |
| Conread position: | 215-477 |
| Cow position: | chr14:31369137-31369407 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 10, 49 |
| Conread position: | 215-477 |
| Cow position: | chr14:43763526-43763797 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 10, 96 |
| Conread position: | 219-477 |
| Cow position: | chr14:8243452-8243202 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 74, 90 |
| Conread position: | 292-477 |
| Cow position: | chr14:48684310-48684486 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 128, 15 |
| Conread position: | 299-576 |
| Cow position: | chr14:44186598-44186311 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 48, 8 |
| Conread position: | 482-588 |
| Cow position: | chr14:26873577-26873685 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 32, 106 |
Show alignments to all cow chromosomes.