Cow genome map

Conread name: Ss1.1-Pig3-SRG8023B06.5

Conread position: 1-275
Cow position: chr15:32289077-32288802 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 118

Conread position: 1-456
Cow position: chr15:38955334-38955799 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 118

Conread position: 2-473
Cow position: chr15:4675383-4674912 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 118

Conread position: 3-167
Cow position: chr15:41325278-41325439 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 106

Conread position: 3-388
Cow position: chr15:28758754-28759135 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 115

Conread position: 3-477
Cow position: chr15:3290681-3291150 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 116

Conread position: 3-477
Cow position: chr15:33264564-33264100 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 117

Conread position: 3-477
Cow position: chr15:35876437-35876910 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 171

Conread position: 3-477
Cow position: chr15:38994497-38994967 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 116

Conread position: 3-477
Cow position: chr15:52485817-52486284 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 107

Conread position: 7-485
Cow position: chr15:26616169-26615702 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 112

Conread position: 8-477
Cow position: chr15:27691197-27690739 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 111

Conread position: 10-456
Cow position: chr15:29290493-29290033 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 179

Conread position: 10-481
Cow position: chr15:32018982-32019471 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 110

Conread position: 11-374
Cow position: chr15:17342340-17342699 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 58

Conread position: 11-486
Cow position: chr15:48282452-48282891 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 62

Conread position: 11-576
Cow position: chr15:17221467-17220914 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 375
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 32, 65

Conread position: 11-576
Cow position: chr15:31278894-31278336 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 62

Conread position: 11-576
Cow position: chr15:42688972-42689542 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 11-576
Cow position: chr15:50168309-50168870 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 12

Conread position: 11-576
Cow position: chr15:53161664-53162199 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 62

Conread position: 11-588
Cow position: chr15:44052318-44052873 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 62

Conread position: 12-480
Cow position: chr15:31686439-31685987 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 31

Conread position: 23-482
Cow position: chr15:45152321-45151884 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 89

Conread position: 130-576
Cow position: chr15:32704097-32703668 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 44

Conread position: 130-576
Cow position: chr15:33517544-33517103 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 44

Conread position: 130-576
Cow position: chr15:52713181-52713607 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 328
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 112, 44

Conread position: 188-487
Cow position: chr15:52067525-52067243 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 85

Conread position: 197-477
Cow position: chr15:8434533-8434243 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 202
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 25, 113

Conread position: 215-477
Cow position: chr15:2965837-2965567 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 96

Conread position: 215-477
Cow position: chr15:13946511-13946780 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 94

Conread position: 215-477
Cow position: chr15:47605281-47605553 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 193
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 10, 96

Conread position: 215-480
Cow position: chr15:32288840-32288578 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 215-566
Cow position: chr15:34393318-34393687 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 249
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 96

Conread position: 292-476
Cow position: chr15:53169765-53169583 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 128, 5

Conread position: 292-485
Cow position: chr15:53573480-53573673 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 128, 15

Conread position: 482-588
Cow position: chr15:35876952-35877060 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 106

Show alignments to all cow chromosomes.