Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8023B06.5 |
| Conread position: | 1-477 |
| Cow position: | chr17:2225850-2225371 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 117 |
| Conread position: | 1-480 |
| Cow position: | chr17:30889413-30888935 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 119 |
| Conread position: | 3-477 |
| Cow position: | chr17:22546295-22546766 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 116 |
| Conread position: | 3-477 |
| Cow position: | chr17:38747753-38747282 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 116 |
| Conread position: | 3-477 |
| Cow position: | chr17:42014506-42014043 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 25 |
| Conread position: | 3-477 |
| Cow position: | chr17:45189689-45190159 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 96 |
| Conread position: | 10-174 |
| Cow position: | chr17:16169354-16169513 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 91, 29 |
| Conread position: | 10-417 |
| Cow position: | chr17:40063177-40063581 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 78 |
| Conread position: | 10-417 |
| Cow position: | chr17:41922670-41922257 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 179 |
| Conread position: | 10-476 |
| Cow position: | chr17:27383256-27382771 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 180 |
| Conread position: | 11-576 |
| Cow position: | chr17:4048710-4048166 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-576 |
| Cow position: | chr17:27255425-27254854 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-576 |
| Cow position: | chr17:28162977-28162433 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 402 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-576 |
| Cow position: | chr17:37114308-37114858 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-576 |
| Cow position: | chr17:41894162-41894704 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-576 |
| Cow position: | chr17:43456318-43455747 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-576 |
| Cow position: | chr17:44581216-44580668 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 11 |
| Conread position: | 13-576 |
| Cow position: | chr17:39862852-39862304 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 63 |
| Conread position: | 27-265 |
| Cow position: | chr17:23606267-23606035 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 158 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 32-576 |
| Cow position: | chr17:41040218-41039697 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 41 |
| Conread position: | 83-467 |
| Cow position: | chr17:10615512-10615140 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 35 |
| Conread position: | 88-476 |
| Cow position: | chr17:27399552-27399156 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 91 |
| Conread position: | 130-480 |
| Cow position: | chr17:40887450-40887117 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 92, 46 |
| Conread position: | 215-477 |
| Cow position: | chr17:22851031-22850759 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 10, 96 |
| Conread position: | 215-477 |
| Cow position: | chr17:37976106-37975835 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 10, 96 |
| Conread position: | 480-581 |
| Cow position: | chr17:30888900-30888796 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
Show alignments to all cow chromosomes.