Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8023B06.5 |
| Conread position: | 1-176 |
| Cow position: | chr19:20628331-20628156 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 43, 119 |
| Conread position: | 1-480 |
| Cow position: | chr19:41534923-41535382 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 117 |
| Conread position: | 3-477 |
| Cow position: | chr19:3468736-3468271 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 105 |
| Conread position: | 3-477 |
| Cow position: | chr19:7133688-7134159 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 116 |
| Conread position: | 3-477 |
| Cow position: | chr19:14475878-14476343 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 109 |
| Conread position: | 3-480 |
| Cow position: | chr19:49660383-49659911 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 116 |
| Conread position: | 9-480 |
| Cow position: | chr19:30253478-30253924 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 98 |
| Conread position: | 10-422 |
| Cow position: | chr19:28611909-28612322 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 118 |
| Conread position: | 11-305 |
| Cow position: | chr19:466466-466748 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 213 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-392 |
| Cow position: | chr19:19007245-19007606 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 282 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-417 |
| Cow position: | chr19:20709039-20708627 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 179 |
| Conread position: | 11-480 |
| Cow position: | chr19:1267051-1266614 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-480 |
| Cow position: | chr19:25019965-25019516 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 57 |
| Conread position: | 11-574 |
| Cow position: | chr19:18568605-18569152 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-576 |
| Cow position: | chr19:20101398-20100828 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-576 |
| Cow position: | chr19:25693875-25694429 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-576 |
| Cow position: | chr19:33967865-33967315 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-576 |
| Cow position: | chr19:38460512-38461054 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 406 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-576 |
| Cow position: | chr19:38464252-38464794 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 406 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-576 |
| Cow position: | chr19:50549680-50549130 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 17-485 |
| Cow position: | chr19:24649158-24649623 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 100 |
| Conread position: | 26-342 |
| Cow position: | chr19:55086269-55086582 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 92 |
| Conread position: | 53-215 |
| Cow position: | chr19:35746197-35746041 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 48, 65 |
| Conread position: | 83-477 |
| Cow position: | chr19:6483707-6484097 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 35 |
| Conread position: | 130-384 |
| Cow position: | chr19:35151684-35151920 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 219, 44 |
| Conread position: | 130-576 |
| Cow position: | chr19:10584669-10585116 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 44 |
| Conread position: | 192-584 |
| Cow position: | chr19:20627528-20627122 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 103 |
| Conread position: | 216-477 |
| Cow position: | chr19:14442379-14442109 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 6, 94 |
| Conread position: | 217-477 |
| Cow position: | chr19:35745757-35745496 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 91 |
| Conread position: | 292-576 |
| Cow position: | chr19:19720147-19719856 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 93, 15 |
| Conread position: | 482-584 |
| Cow position: | chr19:49659872-49659767 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
Show alignments to all cow chromosomes.