Cow genome map
Conread name: | Ss1.1-Pig3-SRG8023B06.5 |
Conread position: | 1-225 |
Cow position: | chr2:22058396-22058612 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 169 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 42, 15 |
Conread position: | 1-456 |
Cow position: | chr2:1489138-1488674 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 93 |
Conread position: | 1-488 |
Cow position: | chr2:74077041-74077547 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 128 |
Conread position: | 2-339 |
Cow position: | chr2:51182940-51183261 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 245 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 41, 9 |
Conread position: | 3-477 |
Cow position: | chr2:35947107-35947571 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 104 |
Conread position: | 3-477 |
Cow position: | chr2:53596240-53596705 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 114 |
Conread position: | 3-485 |
Cow position: | chr2:64788168-64788646 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 118 |
Conread position: | 7-477 |
Cow position: | chr2:35868014-35867544 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 116 |
Conread position: | 10-236 |
Cow position: | chr2:9599417-9599193 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 174 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 33, 109 |
Conread position: | 10-456 |
Cow position: | chr2:57357774-57357315 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 179 |
Conread position: | 10-481 |
Cow position: | chr2:84466787-84467272 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 118 |
Conread position: | 11-384 |
Cow position: | chr2:7330456-7330095 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 273 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 32, 62 |
Conread position: | 11-391 |
Cow position: | chr2:20311923-20312300 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 65 |
Conread position: | 11-477 |
Cow position: | chr2:42109811-42109346 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 339 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 32, 65 |
Conread position: | 11-571 |
Cow position: | chr2:61519116-61518552 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 65 |
Conread position: | 11-576 |
Cow position: | chr2:985980-985415 (view UCSC Genome Browser custom track) |
Alignm length: | 593 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 62 |
Conread position: | 11-576 |
Cow position: | chr2:3428675-3428110 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 62 |
Conread position: | 11-576 |
Cow position: | chr2:7438054-7438618 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 32 |
Conread position: | 11-576 |
Cow position: | chr2:23268209-23268753 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 65 |
Conread position: | 11-576 |
Cow position: | chr2:24009524-24008964 (view UCSC Genome Browser custom track) |
Alignm length: | 593 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 62 |
Conread position: | 11-576 |
Cow position: | chr2:37045434-37045993 (view UCSC Genome Browser custom track) |
Alignm length: | 587 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 62 |
Conread position: | 11-576 |
Cow position: | chr2:37940508-37939962 (view UCSC Genome Browser custom track) |
Alignm length: | 591 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 62 |
Conread position: | 11-576 |
Cow position: | chr2:44490756-44490202 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 384 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 33, 65 |
Conread position: | 11-576 |
Cow position: | chr2:58531638-58532175 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 62 |
Conread position: | 11-576 |
Cow position: | chr2:64083442-64082893 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 65 |
Conread position: | 11-576 |
Cow position: | chr2:64098520-64099064 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 408 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 32, 65 |
Conread position: | 11-576 |
Cow position: | chr2:68244130-68243584 (view UCSC Genome Browser custom track) |
Alignm length: | 593 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 62 |
Conread position: | 11-576 |
Cow position: | chr2:73129999-73130549 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 62 |
Conread position: | 11-576 |
Cow position: | chr2:73984048-73984602 (view UCSC Genome Browser custom track) |
Alignm length: | 582 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 65 |
Conread position: | 11-576 |
Cow position: | chr2:75444689-75445231 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 405 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 32, 62 |
Conread position: | 11-576 |
Cow position: | chr2:85001814-85002364 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 65 |
Conread position: | 11-576 |
Cow position: | chr2:85087372-85086825 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 62 |
Conread position: | 13-576 |
Cow position: | chr2:44444984-44444436 (view UCSC Genome Browser custom track) |
Alignm length: | 590 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 60 |
Conread position: | 23-480 |
Cow position: | chr2:47878274-47878709 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 68 |
Conread position: | 23-581 |
Cow position: | chr2:51219098-51219664 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 440 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 95 |
Conread position: | 95-576 |
Cow position: | chr2:85395115-85394635 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 83 |
Conread position: | 116-421 |
Cow position: | chr2:5776815-5776509 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 225 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 105, 60 |
Conread position: | 130-566 |
Cow position: | chr2:45072402-45072819 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 324 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 256, 44 |
Conread position: | 130-576 |
Cow position: | chr2:12502838-12502412 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 330 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 252, 44 |
Conread position: | 130-576 |
Cow position: | chr2:39462998-39463425 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 252, 45 |
Conread position: | 130-576 |
Cow position: | chr2:52206069-52206492 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 324 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 252, 44 |
Conread position: | 130-576 |
Cow position: | chr2:60820501-60820927 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 252, 44 |
Conread position: | 130-576 |
Cow position: | chr2:63171264-63170850 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 252, 44 |
Conread position: | 130-576 |
Cow position: | chr2:75624855-75624409 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 44 |
Conread position: | 167-340 |
Cow position: | chr2:5920797-5920970 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 129 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 62, 114 |
Conread position: | 215-477 |
Cow position: | chr2:24605628-24605355 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 188 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 10, 98 |
Conread position: | 215-477 |
Cow position: | chr2:37172776-37173047 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 195 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 10, 96 |
Conread position: | 215-477 |
Cow position: | chr2:46915810-46916081 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 197 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 10, 96 |
Show alignments to all cow chromosomes.