Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8023B06.5 |
| Conread position: | 1-456 |
| Cow position: | chr21:40468385-40468850 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 111 |
| Conread position: | 3-477 |
| Cow position: | chr21:13702668-13703140 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 116 |
| Conread position: | 3-477 |
| Cow position: | chr21:13746002-13746472 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 67 |
| Conread position: | 3-477 |
| Cow position: | chr21:37765200-37764732 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 116 |
| Conread position: | 10-456 |
| Cow position: | chr21:16086276-16086736 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 180 |
| Conread position: | 11-328 |
| Cow position: | chr21:41125527-41125212 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 62 |
| Conread position: | 11-383 |
| Cow position: | chr21:37008607-37008248 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-391 |
| Cow position: | chr21:11520367-11520005 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-392 |
| Cow position: | chr21:586434-586793 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 276 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-480 |
| Cow position: | chr21:35221293-35220846 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-576 |
| Cow position: | chr21:4821235-4821780 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-576 |
| Cow position: | chr21:11010146-11009597 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-576 |
| Cow position: | chr21:18945896-18946442 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-576 |
| Cow position: | chr21:29258738-29258191 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-576 |
| Cow position: | chr21:32660085-32660627 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-576 |
| Cow position: | chr21:36632017-36631466 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-576 |
| Cow position: | chr21:40815853-40816444 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-576 |
| Cow position: | chr21:41376383-41375833 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 47-588 |
| Cow position: | chr21:23993795-23993247 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 73 |
| Conread position: | 130-459 |
| Cow position: | chr21:12672629-12672313 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 92, 49 |
| Conread position: | 130-510 |
| Cow position: | chr21:4969598-4969964 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 92, 46 |
| Conread position: | 130-576 |
| Cow position: | chr21:42860688-42860262 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 44 |
| Conread position: | 215-457 |
| Cow position: | chr21:27853664-27853916 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 10, 96 |
| Conread position: | 215-477 |
| Cow position: | chr21:7145226-7144956 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 10, 96 |
| Conread position: | 215-477 |
| Cow position: | chr21:47736736-47737007 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 10, 96 |
| Conread position: | 482-588 |
| Cow position: | chr21:37764690-37764582 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 106 |
Show alignments to all cow chromosomes.