Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8023B06.5
        

               Conread position:
               1-417
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 118
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 118
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 118
               

               Conread position:
               3-461
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 110
               

               Conread position:
               3-477
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 110
               

               Conread position:
               3-477
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 38
               

               Conread position:
               3-477
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 115
               

               Conread position:
               7-262
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 112
               

               Conread position:
               7-474
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 110
               

               Conread position:
               7-477
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 111
               

               Conread position:
               7-477
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 106
               

               Conread position:
               7-477
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 118
               

               Conread position:
               10-422
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 180
               

               Conread position:
               10-456
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 109
               

               Conread position:
               10-456
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 180
               

               Conread position:
               10-480
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 119
               

               Conread position:
               11-254
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               11-384
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               11-384
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               11-384
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 57
               

               Conread position:
               11-480
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               11-566
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               11-566
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               11-576
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 85
               

               Conread position:
               11-576
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 65
               

               Conread position:
               11-576
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 52
               

               Conread position:
               11-576
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               11-576
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 58
               

               Conread position:
               11-576
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               396
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               70, 32
               

               Conread position:
               11-576
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               11-576
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 52
               

               Conread position:
               11-576
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               11-576
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               11-576
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               12-576
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 64
               

               Conread position:
               15-576
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 61
               

               Conread position:
               20-268
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               188
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               23, 99
               

               Conread position:
               23-485
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 95
               

               Conread position:
               32-576
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 31
               

               Conread position:
               34-480
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 83
               

               Conread position:
               42-576
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 30
               

               Conread position:
               117-456
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               104, 59
               

               Conread position:
               117-495
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 58
               

               Conread position:
               125-576
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               330
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               257, 49
               

               Conread position:
               130-495
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               89, 46
               

               Conread position:
               130-576
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 44
               

               Conread position:
               133-339
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               93, 41
               

               Conread position:
               215-477
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               10, 96
               

               Conread position:
               215-477
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               10, 96
               

               Conread position:
               215-477
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               10, 96
               
Show alignments to all cow chromosomes.