Cow genome map

Conread name: Ss1.1-Pig3-SRG8023B06.5

Conread position: 1-422
Cow position: chr5:61130820-61130395 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 128

Conread position: 1-456
Cow position: chr5:39153811-39153348 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 118

Conread position: 1-456
Cow position: chr5:41434962-41435418 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 118

Conread position: 1-480
Cow position: chr5:24621907-24622390 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 115

Conread position: 3-167
Cow position: chr5:502497-502662 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 40, 115

Conread position: 3-476
Cow position: chr5:44969872-44969403 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 116

Conread position: 3-477
Cow position: chr5:30285735-30286198 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 115

Conread position: 3-477
Cow position: chr5:35292357-35292819 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 110

Conread position: 3-477
Cow position: chr5:72462922-72462450 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 116

Conread position: 3-477
Cow position: chr5:73100144-73099692 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 86

Conread position: 3-480
Cow position: chr5:59068960-59069434 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 115

Conread position: 7-477
Cow position: chr5:1651010-1651470 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 106

Conread position: 11-270
Cow position: chr5:70122017-70121766 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 32, 65

Conread position: 11-305
Cow position: chr5:33952348-33952630 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 32, 62

Conread position: 11-305
Cow position: chr5:33954264-33954546 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 32, 62

Conread position: 11-346
Cow position: chr5:53738199-53737868 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 243
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 32, 65

Conread position: 11-383
Cow position: chr5:70588973-70589333 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 272
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 32, 62

Conread position: 11-480
Cow position: chr5:3236201-3236650 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 11-480
Cow position: chr5:44833021-44833468 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 32

Conread position: 11-480
Cow position: chr5:67450651-67451100 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 47

Conread position: 11-480
Cow position: chr5:72685529-72685100 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 333
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 32, 62

Conread position: 11-480
Cow position: chr5:73108161-73107724 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 11-571
Cow position: chr5:56811339-56811903 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 11-571
Cow position: chr5:72538267-72537703 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 32

Conread position: 11-576
Cow position: chr5:13232874-13233417 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 62

Conread position: 11-576
Cow position: chr5:17279537-17278994 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 32

Conread position: 11-576
Cow position: chr5:21152137-21151598 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 41

Conread position: 11-576
Cow position: chr5:38941568-38942121 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 11-576
Cow position: chr5:47878000-47878550 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 62

Conread position: 11-576
Cow position: chr5:48981480-48980926 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 11-576
Cow position: chr5:50496007-50496561 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 11-576
Cow position: chr5:56531932-56531382 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 11-576
Cow position: chr5:56825428-56824879 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 11-576
Cow position: chr5:59100494-59099931 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 11-576
Cow position: chr5:70096731-70096182 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 11-576
Cow position: chr5:72265281-72264731 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 62

Conread position: 11-588
Cow position: chr5:39950836-39951396 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 12-391
Cow position: chr5:73700855-73700496 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 275
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 31, 64

Conread position: 19-477
Cow position: chr5:61499218-61499661 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 94

Conread position: 23-478
Cow position: chr5:59125038-59124603 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 94

Conread position: 30-576
Cow position: chr5:50230802-50231352 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 28

Conread position: 32-488
Cow position: chr5:21545452-21545926 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 96

Conread position: 121-576
Cow position: chr5:21510320-21509883 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 55

Conread position: 124-481
Cow position: chr5:28011489-28011124 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 52

Conread position: 131-576
Cow position: chr5:60173404-60172979 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 43

Conread position: 174-576
Cow position: chr5:43101049-43100648 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 99

Conread position: 194-477
Cow position: chr5:24184180-24183905 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 214
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 33, 15

Conread position: 213-477
Cow position: chr5:39293370-39293628 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 14, 92

Conread position: 215-477
Cow position: chr5:2870010-2870281 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 96

Conread position: 215-477
Cow position: chr5:11642432-11642161 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 10, 99

Conread position: 215-477
Cow position: chr5:37793708-37793437 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 198
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 10, 96

Conread position: 215-477
Cow position: chr5:56546018-56545747 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 198
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 10, 96

Conread position: 224-477
Cow position: chr5:44619017-44619270 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 17

Show alignments to all cow chromosomes.