Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8023B06.5
        

               Conread position:
               1-422
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 128
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 118
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 118
               

               Conread position:
               1-480
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 115
               

               Conread position:
               3-167
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               40, 115
               

               Conread position:
               3-476
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 116
               

               Conread position:
               3-477
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 115
               

               Conread position:
               3-477
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 110
               

               Conread position:
               3-477
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 116
               

               Conread position:
               3-477
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 86
               

               Conread position:
               3-480
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 115
               

               Conread position:
               7-477
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 106
               

               Conread position:
               11-270
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               32, 65
               

               Conread position:
               11-305
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               11-305
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               11-346
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               243
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               32, 65
               

               Conread position:
               11-383
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               272
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               11-480
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 65
               

               Conread position:
               11-480
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 32
               

               Conread position:
               11-480
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 47
               

               Conread position:
               11-480
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               333
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               11-480
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 65
               

               Conread position:
               11-571
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 65
               

               Conread position:
               11-571
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 32
               

               Conread position:
               11-576
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               11-576
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 32
               

               Conread position:
               11-576
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 41
               

               Conread position:
               11-576
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 65
               

               Conread position:
               11-576
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               11-576
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 65
               

               Conread position:
               11-576
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 65
               

               Conread position:
               11-576
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 65
               

               Conread position:
               11-576
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 65
               

               Conread position:
               11-576
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 65
               

               Conread position:
               11-576
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 65
               

               Conread position:
               11-576
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               11-588
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 65
               

               Conread position:
               12-391
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               31, 64
               

               Conread position:
               19-477
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 94
               

               Conread position:
               23-478
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 94
               

               Conread position:
               30-576
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 28
               

               Conread position:
               32-488
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 96
               

               Conread position:
               121-576
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 55
               

               Conread position:
               124-481
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 52
               

               Conread position:
               131-576
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 43
               

               Conread position:
               174-576
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 99
               

               Conread position:
               194-477
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               33, 15
               

               Conread position:
               213-477
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               14, 92
               

               Conread position:
               215-477
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 96
               

               Conread position:
               215-477
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               10, 99
               

               Conread position:
               215-477
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               10, 96
               

               Conread position:
               215-477
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               10, 96
               

               Conread position:
               224-477
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               44, 17
               
Show alignments to all cow chromosomes.