Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8023B06.5 |
| Conread position: | 1-456 |
| Cow position: | chr8:51407251-51407716 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 118 |
| Conread position: | 1-456 |
| Cow position: | chr8:51411968-51412433 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 118 |
| Conread position: | 3-467 |
| Cow position: | chr8:31965210-31965656 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 115 |
| Conread position: | 3-477 |
| Cow position: | chr8:42652943-42652474 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 116 |
| Conread position: | 3-480 |
| Cow position: | chr8:8492940-8492465 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 39 |
| Conread position: | 3-485 |
| Cow position: | chr8:40382438-40382916 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 117 |
| Conread position: | 3-485 |
| Cow position: | chr8:55819386-55818906 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 116 |
| Conread position: | 7-372 |
| Cow position: | chr8:53324922-53325277 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 111 |
| Conread position: | 8-158 |
| Cow position: | chr8:8395351-8395208 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 88, 34 |
| Conread position: | 10-417 |
| Cow position: | chr8:21964481-21964898 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 289 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 10-456 |
| Cow position: | chr8:55715518-55715978 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 179 |
| Conread position: | 11-268 |
| Cow position: | chr8:18615546-18615795 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-384 |
| Cow position: | chr8:1211007-1210647 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 271 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-391 |
| Cow position: | chr8:23159040-23158662 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-391 |
| Cow position: | chr8:33537138-33537516 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-412 |
| Cow position: | chr8:48082385-48082000 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-480 |
| Cow position: | chr8:53735141-53735578 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-575 |
| Cow position: | chr8:45291804-45291255 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-576 |
| Cow position: | chr8:1483219-1483789 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 39 |
| Conread position: | 11-576 |
| Cow position: | chr8:4275347-4274776 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-576 |
| Cow position: | chr8:24949031-24949581 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 58 |
| Conread position: | 11-576 |
| Cow position: | chr8:35605230-35604687 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 57 |
| Conread position: | 11-576 |
| Cow position: | chr8:42654799-42654253 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-576 |
| Cow position: | chr8:48460071-48460612 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-576 |
| Cow position: | chr8:50005492-50004942 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-576 |
| Cow position: | chr8:51597757-51598316 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 64 |
| Conread position: | 11-576 |
| Cow position: | chr8:60721109-60721659 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-576 |
| Cow position: | chr8:61196282-61196844 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 13-576 |
| Cow position: | chr8:34530726-34531295 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 63 |
| Conread position: | 51-480 |
| Cow position: | chr8:8504819-8504391 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 67 |
| Conread position: | 130-510 |
| Cow position: | chr8:37025983-37025617 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 267 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 89, 36 |
| Conread position: | 130-576 |
| Cow position: | chr8:478302-477879 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 324 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 252, 44 |
| Conread position: | 156-477 |
| Cow position: | chr8:4348303-4348618 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 71, 149 |
| Conread position: | 188-575 |
| Cow position: | chr8:45542214-45542578 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 262 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 194, 29 |
| Conread position: | 192-477 |
| Cow position: | chr8:8395104-8394813 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 96 |
| Conread position: | 215-477 |
| Cow position: | chr8:40335807-40335538 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 10, 38 |
| Conread position: | 480-588 |
| Cow position: | chr8:8394774-8394665 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 34, 8 |
Show alignments to all cow chromosomes.