Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8023B06.5 |
| Conread position: | 1-456 |
| Cow position: | chrX:7485422-7485887 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 118 |
| Conread position: | 3-477 |
| Cow position: | chrX:36879820-36880276 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 116 |
| Conread position: | 3-576 |
| Cow position: | chrX:47789982-47790558 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 110 |
| Conread position: | 7-477 |
| Cow position: | chrX:2708686-2708234 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 112 |
| Conread position: | 7-477 |
| Cow position: | chrX:13905208-13904757 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 33 |
| Conread position: | 7-569 |
| Cow position: | chrX:12462438-12462994 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 208 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 37, 106 |
| Conread position: | 10-417 |
| Cow position: | chrX:47428129-47428538 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 287 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 33, 118 |
| Conread position: | 11-267 |
| Cow position: | chrX:15296353-15296095 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-339 |
| Cow position: | chrX:3156588-3156912 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-376 |
| Cow position: | chrX:28517069-28516716 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 266 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-384 |
| Cow position: | chrX:13857562-13857202 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 268 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-391 |
| Cow position: | chrX:5327207-5326830 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-392 |
| Cow position: | chrX:16880176-16879815 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 275 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-566 |
| Cow position: | chrX:4047826-4047270 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 41 |
| Conread position: | 11-576 |
| Cow position: | chrX:15104543-15103996 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-576 |
| Cow position: | chrX:16491322-16491866 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-576 |
| Cow position: | chrX:20001464-20000898 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 54 |
| Conread position: | 11-576 |
| Cow position: | chrX:20676827-20676256 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 11-576 |
| Cow position: | chrX:40228287-40228833 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-576 |
| Cow position: | chrX:43814738-43814180 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 11-576 |
| Cow position: | chrX:45392691-45392126 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 13-576 |
| Cow position: | chrX:45777577-45777029 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 63 |
| Conread position: | 24-384 |
| Cow position: | chrX:5538610-5538957 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 262 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 19, 49 |
| Conread position: | 26-477 |
| Cow position: | chrX:20132720-20132272 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 93 |
| Conread position: | 130-422 |
| Cow position: | chrX:24501205-24501488 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 92, 46 |
| Conread position: | 130-476 |
| Cow position: | chrX:24495366-24495701 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 257 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 91, 46 |
| Conread position: | 207-477 |
| Cow position: | chrX:9986230-9986495 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 22, 105 |
| Conread position: | 296-477 |
| Cow position: | chrX:21319656-21319836 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 129, 11 |
Show alignments to all cow chromosomes.