Cow genome map

Conread name: Ss1.1-Pig3-SRG8023H09.5

Conread position: 3-177
Cow position: chr12:33319738-33319571 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 4-216
Cow position: chr12:31532474-31532260 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 62

Conread position: 5-144
Cow position: chr12:19507567-19507703 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 5-164
Cow position: chr12:15641179-15641022 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 5-226
Cow position: chr12:38774314-38774086 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 148, 15

Conread position: 6-143
Cow position: chr12:3092652-3092515 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 57

Conread position: 6-172
Cow position: chr12:46464137-46463976 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 6-174
Cow position: chr12:44622284-44622443 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 6-177
Cow position: chr12:6720254-6720426 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 26, 54

Conread position: 6-198
Cow position: chr12:27037521-27037330 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 56, 0

Conread position: 6-219
Cow position: chr12:26777260-26777042 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 179, 56

Conread position: 6-224
Cow position: chr12:11056803-11057023 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 14, 58

Conread position: 6-224
Cow position: chr12:11587702-11587926 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 62

Conread position: 6-224
Cow position: chr12:18518601-18518829 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 13, 57

Conread position: 6-224
Cow position: chr12:35771091-35770867 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 170, 10

Conread position: 6-226
Cow position: chr12:22285192-22284963 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 114, 10

Conread position: 6-226
Cow position: chr12:30170598-30170811 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 66, 55

Conread position: 6-240
Cow position: chr12:18577769-18577999 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 105, 13

Conread position: 6-243
Cow position: chr12:25561299-25561542 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 187
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 178, 56

Conread position: 6-244
Cow position: chr12:41159519-41159758 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 171, 61

Conread position: 6-245
Cow position: chr12:6410805-6410558 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 89, 10

Conread position: 6-248
Cow position: chr12:6241249-6241507 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 163, 10

Conread position: 6-248
Cow position: chr12:26151531-26151299 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 133, 65

Conread position: 6-250
Cow position: chr12:18583062-18582817 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 183, 19

Conread position: 6-254
Cow position: chr12:21780092-21780352 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 151, 10

Conread position: 7-224
Cow position: chr12:4768855-4769076 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 10, 64

Conread position: 7-246
Cow position: chr12:48287762-48287528 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 8-177
Cow position: chr12:3880049-3879881 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 125, 59

Conread position: 8-177
Cow position: chr12:23574694-23574862 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 8-222
Cow position: chr12:36544711-36544490 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 60, 14

Conread position: 9-152
Cow position: chr12:5905988-5906130 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 9-163
Cow position: chr12:4793130-4793282 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 123, 7

Conread position: 9-172
Cow position: chr12:19274464-19274304 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 139, 7

Conread position: 9-176
Cow position: chr12:19502495-19502332 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 135
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 7, 0

Conread position: 9-177
Cow position: chr12:4341811-4341645 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 9-177
Cow position: chr12:29770639-29770479 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 165, 7

Conread position: 9-177
Cow position: chr12:30819176-30819342 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 9-177
Cow position: chr12:30919357-30919524 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 9-177
Cow position: chr12:37993800-37993633 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 9-177
Cow position: chr12:45168086-45167921 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 9-181
Cow position: chr12:15703564-15703396 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 9-184
Cow position: chr12:3371609-3371438 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 165, 9

Conread position: 9-216
Cow position: chr12:30194645-30194842 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 166, 7

Conread position: 9-222
Cow position: chr12:9914722-9914936 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 174, 7

Conread position: 9-222
Cow position: chr12:48415579-48415365 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 178, 7

Conread position: 9-224
Cow position: chr12:3623627-3623848 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 177, 7

Conread position: 9-224
Cow position: chr12:40158090-40157871 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 178, 53

Conread position: 9-225
Cow position: chr12:44203052-44202835 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 175, 47

Conread position: 9-226
Cow position: chr12:17881794-17882014 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 164, 7

Conread position: 9-226
Cow position: chr12:19261128-19261354 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 174
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 150, 7

Conread position: 9-226
Cow position: chr12:20479400-20479185 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 54

Conread position: 9-226
Cow position: chr12:24032429-24032647 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 144, 7

Conread position: 9-242
Cow position: chr12:17879368-17879133 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 183
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 178, 7

Conread position: 9-243
Cow position: chr12:5635521-5635274 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 84, 61

Conread position: 9-247
Cow position: chr12:4719880-4720126 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 165
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 178, 7

Conread position: 9-248
Cow position: chr12:6469128-6468893 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 180, 52

Conread position: 9-252
Cow position: chr12:40881978-40881738 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 177, 53

Conread position: 9-253
Cow position: chr12:18123602-18123849 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 7

Conread position: 9-256
Cow position: chr12:35368575-35368821 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 206, 7

Conread position: 9-257
Cow position: chr12:17269735-17269990 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 168, 10

Conread position: 9-261
Cow position: chr12:37770810-37771050 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 7

Conread position: 9-285
Cow position: chr12:17252265-17251993 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 177, 7

Conread position: 12-170
Cow position: chr12:6485276-6485120 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 7, 43

Conread position: 12-176
Cow position: chr12:15530994-15531153 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 145, 6

Conread position: 12-180
Cow position: chr12:6235223-6235392 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 6

Conread position: 12-181
Cow position: chr12:15429662-15429496 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 51

Conread position: 12-184
Cow position: chr12:2813163-2813331 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 12-224
Cow position: chr12:1333166-1333374 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 161, 50

Conread position: 12-224
Cow position: chr12:30745654-30745873 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 47

Conread position: 12-224
Cow position: chr12:34161348-34161560 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 7, 42

Conread position: 12-224
Cow position: chr12:37170012-37169792 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 7, 51

Conread position: 12-226
Cow position: chr12:5554400-5554178 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 13, 51

Conread position: 12-240
Cow position: chr12:26217891-26217656 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 7, 52

Conread position: 12-247
Cow position: chr12:15089450-15089694 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 7, 51

Conread position: 12-252
Cow position: chr12:18388354-18388107 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 11

Conread position: 13-168
Cow position: chr12:7311316-7311470 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 68, 49

Conread position: 13-246
Cow position: chr12:7884744-7884502 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 163, 9

Conread position: 14-161
Cow position: chr12:3197206-3197351 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 14-171
Cow position: chr12:36994180-36994023 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 6, 47

Conread position: 14-185
Cow position: chr12:4866753-4866924 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 6, 49

Conread position: 14-193
Cow position: chr12:45820430-45820251 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 6, 49

Conread position: 14-231
Cow position: chr12:24167008-24166785 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 7, 49

Conread position: 14-242
Cow position: chr12:18513992-18513753 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 6, 29

Conread position: 15-128
Cow position: chr12:34673402-34673290 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 77, 47

Conread position: 15-160
Cow position: chr12:23644866-23644721 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 15-177
Cow position: chr12:18020796-18020956 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 15-177
Cow position: chr12:45014617-45014782 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 47

Conread position: 15-218
Cow position: chr12:9143326-9143535 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 77, 13

Conread position: 15-224
Cow position: chr12:9229562-9229359 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 15-224
Cow position: chr12:32169479-32169703 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 150, 46

Conread position: 15-224
Cow position: chr12:37008765-37008553 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 172, 45

Conread position: 15-224
Cow position: chr12:42879632-42879856 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 175
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 76, 47

Conread position: 15-226
Cow position: chr12:20776983-20776770 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 77, 48

Conread position: 15-231
Cow position: chr12:25917335-25917120 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 130, 49

Conread position: 15-245
Cow position: chr12:25805191-25804967 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 10, 0

Conread position: 15-248
Cow position: chr12:9766939-9766702 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 143, 52

Conread position: 16-161
Cow position: chr12:25177657-25177515 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 16-170
Cow position: chr12:46120895-46120739 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 16-171
Cow position: chr12:15260702-15260854 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 16-173
Cow position: chr12:4797239-4797394 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 16-176
Cow position: chr12:42685006-42684847 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 16-177
Cow position: chr12:7000664-7000506 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 16-177
Cow position: chr12:32714985-32715143 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 141, 38

Conread position: 16-181
Cow position: chr12:30590703-30590867 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 44, 134

Conread position: 16-181
Cow position: chr12:44916044-44916204 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 16-189
Cow position: chr12:4596401-4596574 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 164

Conread position: 16-197
Cow position: chr12:27357327-27357506 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 30, 0

Conread position: 16-206
Cow position: chr12:5631940-5631745 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 146, 45

Conread position: 16-215
Cow position: chr12:6484079-6484276 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 149, 51

Conread position: 16-220
Cow position: chr12:35669532-35669319 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 16-224
Cow position: chr12:5714569-5714775 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 155, 42

Conread position: 16-224
Cow position: chr12:33851300-33851513 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 158, 49

Conread position: 16-226
Cow position: chr12:4594440-4594658 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 76, 47

Conread position: 16-226
Cow position: chr12:24273420-24273213 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 69, 46

Conread position: 16-235
Cow position: chr12:17031555-17031777 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 75, 42

Conread position: 16-242
Cow position: chr12:42285909-42286139 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 134, 46

Conread position: 16-245
Cow position: chr12:45092385-45092619 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 150, 46

Conread position: 16-248
Cow position: chr12:7902866-7902626 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 42, 132

Conread position: 16-250
Cow position: chr12:39465518-39465744 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 167, 46

Conread position: 16-252
Cow position: chr12:11659867-11660110 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 161, 46

Conread position: 16-252
Cow position: chr12:37514342-37514099 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 189
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 170, 46

Conread position: 16-255
Cow position: chr12:5839717-5839478 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 102, 46

Conread position: 16-255
Cow position: chr12:24663053-24663291 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 143, 51

Conread position: 17-179
Cow position: chr12:4008342-4008180 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 123, 5

Conread position: 17-220
Cow position: chr12:24181089-24181296 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 170, 43

Conread position: 17-222
Cow position: chr12:30210423-30210625 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 48, 0

Conread position: 17-225
Cow position: chr12:18103669-18103459 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 67, 39

Conread position: 17-226
Cow position: chr12:30805793-30806012 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 73, 45

Conread position: 17-226
Cow position: chr12:33976139-33976362 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 138, 45

Conread position: 17-256
Cow position: chr12:11836174-11836416 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 169, 53

Conread position: 19-224
Cow position: chr12:26575838-26576049 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 171
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 168, 43

Conread position: 22-161
Cow position: chr12:19691286-19691151 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 22-172
Cow position: chr12:18766028-18765879 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 22-172
Cow position: chr12:30753665-30753813 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 22-174
Cow position: chr12:7920187-7920338 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 85, 40

Conread position: 22-174
Cow position: chr12:42181184-42181033 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 22-178
Cow position: chr12:7110142-7110297 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 22-214
Cow position: chr12:31517226-31517036 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 165, 45

Conread position: 22-225
Cow position: chr12:33948849-33949058 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 163, 45

Conread position: 22-243
Cow position: chr12:29057334-29057564 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 127, 45

Conread position: 23-233
Cow position: chr12:34148415-34148197 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 106, 40

Conread position: 24-226
Cow position: chr12:17001205-17001400 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 93, 38

Conread position: 24-247
Cow position: chr12:42784256-42784487 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 54, 39

Conread position: 24-268
Cow position: chr12:36261636-36261895 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 126, 38

Conread position: 24-276
Cow position: chr12:45039054-45039322 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 26-172
Cow position: chr12:6139631-6139483 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 27, 11

Conread position: 26-176
Cow position: chr12:22485761-22485904 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 26-179
Cow position: chr12:1766861-1767010 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 26-222
Cow position: chr12:24116413-24116218 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 140, 13

Conread position: 26-234
Cow position: chr12:15122273-15122494 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 26-247
Cow position: chr12:27803101-27802880 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 131, 41

Conread position: 26-271
Cow position: chr12:23446672-23446921 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 161, 21

Conread position: 27-163
Cow position: chr12:30605215-30605081 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 27-226
Cow position: chr12:2734958-2734752 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 158, 40

Conread position: 30-224
Cow position: chr12:22859420-22859607 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 30-226
Cow position: chr12:34466051-34465859 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 30-227
Cow position: chr12:43854847-43855050 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 156, 32

Conread position: 30-243
Cow position: chr12:24437682-24437456 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 127, 37

Conread position: 31-225
Cow position: chr12:23714628-23714830 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 7, 37

Conread position: 32-244
Cow position: chr12:48578798-48579012 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 143, 31

Conread position: 32-251
Cow position: chr12:14986704-14986932 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 177
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 142, 30

Conread position: 33-226
Cow position: chr12:3586074-3586273 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 143, 29

Conread position: 35-214
Cow position: chr12:27572282-27572102 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 158, 32

Conread position: 37-226
Cow position: chr12:29731274-29731470 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 148, 25

Conread position: 38-245
Cow position: chr12:2964011-2964224 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 124, 25

Conread position: 39-177
Cow position: chr12:23696198-23696062 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 41-210
Cow position: chr12:6480604-6480785 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 21

Conread position: 42-175
Cow position: chr12:27430471-27430604 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 104, 20

Conread position: 43-248
Cow position: chr12:29180639-29180855 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 43-251
Cow position: chr12:29316496-29316278 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 76, 24

Conread position: 45-227
Cow position: chr12:6666542-6666721 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 118, 17

Conread position: 51-244
Cow position: chr12:19272717-19272514 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 10, 193

Conread position: 52-243
Cow position: chr12:4512475-4512275 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 106, 10

Conread position: 55-224
Cow position: chr12:17108135-17108311 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 7, 32

Conread position: 55-244
Cow position: chr12:25528584-25528385 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 7, 158

Conread position: 61-243
Cow position: chr12:20439274-20439085 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 25

Conread position: 61-254
Cow position: chr12:6958202-6958407 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 62-231
Cow position: chr12:38679033-38679212 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 62-248
Cow position: chr12:583525-583321 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 93, 5

Conread position: 67-226
Cow position: chr12:33129243-33129413 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 67-242
Cow position: chr12:17490204-17490388 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 36

Conread position: 68-171
Cow position: chr12:4014443-4014340 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 18

Conread position: 70-182
Cow position: chr12:24186498-24186390 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 88-177
Cow position: chr12:34459670-34459759 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 77
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 91-254
Cow position: chr12:26945822-26945658 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 100

Conread position: 93-224
Cow position: chr12:43869184-43869061 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 97-252
Cow position: chr12:15151850-15151693 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 125

Show alignments to all cow chromosomes.