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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8023H09.5
        

               
Conread position:
               
1-224
               

               
Cow position:
               
chr15:24982049-24982282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
12, 63
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr15:20422660-20422866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
184, 9
               

               
Conread position:
               
4-256
               

               
Cow position:
               
chr15:14505553-14505308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
183, 25
               

               
Conread position:
               
5-157
               

               
Cow position:
               
chr15:6530726-6530876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
5-173
               

               
Cow position:
               
chr15:52611430-52611259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
5-176
               

               
Cow position:
               
chr15:286602-286429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 63
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr15:21903289-21903529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
145, 7
               

               
Conread position:
               
6-159
               

               
Cow position:
               
chr15:16908554-16908403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
6-168
               

               
Cow position:
               
chr15:40957697-40957544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
6-174
               

               
Cow position:
               
chr15:27016128-27016292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
6-174
               

               
Cow position:
               
chr15:42789025-42789193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
6-177
               

               
Cow position:
               
chr15:9465800-9465629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 57
               

               
Conread position:
               
6-177
               

               
Cow position:
               
chr15:34751207-34751041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
142, 10
               

               
Conread position:
               
6-177
               

               
Cow position:
               
chr15:44280223-44280054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
87, 9
               

               
Conread position:
               
6-181
               

               
Cow position:
               
chr15:1329981-1330156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
85, 56
               

               
Conread position:
               
6-203
               

               
Cow position:
               
chr15:2141182-2141377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
172, 10
               

               
Conread position:
               
6-210
               

               
Cow position:
               
chr15:34284289-34284502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
107, 9
               

               
Conread position:
               
6-224
               

               
Cow position:
               
chr15:25208635-25208865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
153, 57
               

               
Conread position:
               
6-224
               

               
Cow position:
               
chr15:36773577-36773787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
209, 10
               

               
Conread position:
               
6-224
               

               
Cow position:
               
chr15:41527855-41528072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
168, 10
               

               
Conread position:
               
6-224
               

               
Cow position:
               
chr15:49274074-49273856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
181, 10
               

               
Conread position:
               
6-231
               

               
Cow position:
               
chr15:14988111-14987882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 56
               

               
Conread position:
               
6-233
               

               
Cow position:
               
chr15:26158478-26158715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
166, 10
               

               
Conread position:
               
6-241
               

               
Cow position:
               
chr15:30470850-30471102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
157, 56
               

               
Conread position:
               
6-241
               

               
Cow position:
               
chr15:47843971-47844208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
179, 61
               

               
Conread position:
               
6-260
               

               
Cow position:
               
chr15:52809460-52809705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 10
               

               
Conread position:
               
7-155
               

               
Cow position:
               
chr15:46868596-46868740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
7-173
               

               
Cow position:
               
chr15:50660746-50660581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 55
               

               
Conread position:
               
7-222
               

               
Cow position:
               
chr15:22553421-22553645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
12, 5
               

               
Conread position:
               
7-237
               

               
Cow position:
               
chr15:10231630-10231862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
142, 9
               

               
Conread position:
               
9-122
               

               
Cow position:
               
chr15:13515486-13515373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 53
               

               
Conread position:
               
9-146
               

               
Cow position:
               
chr15:20351952-20351815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 54
               

               
Conread position:
               
9-149
               

               
Cow position:
               
chr15:10660436-10660575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
9-167
               

               
Cow position:
               
chr15:14176381-14176537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
9-171
               

               
Cow position:
               
chr15:50302300-50302142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
9-177
               

               
Cow position:
               
chr15:10608187-10608351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
75, 53
               

               
Conread position:
               
9-177
               

               
Cow position:
               
chr15:22984692-22984531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
9-177
               

               
Cow position:
               
chr15:39316724-39316890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
9-177
               

               
Cow position:
               
chr15:49257983-49257816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
154, 58
               

               
Conread position:
               
9-180
               

               
Cow position:
               
chr15:41056086-41056258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
139, 7
               

               
Conread position:
               
9-183
               

               
Cow position:
               
chr15:4694861-4694690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
136, 7
               

               
Conread position:
               
9-194
               

               
Cow position:
               
chr15:11912441-11912622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
148, 9
               

               
Conread position:
               
9-198
               

               
Cow position:
               
chr15:28038894-28038708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
139, 52
               

               
Conread position:
               
9-214
               

               
Cow position:
               
chr15:8354159-8353945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
162, 7
               

               
Conread position:
               
9-215
               

               
Cow position:
               
chr15:39090414-39090221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
9-217
               

               
Cow position:
               
chr15:34896878-34896662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
136, 7
               

               
Conread position:
               
9-220
               

               
Cow position:
               
chr15:32977728-32977931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
9-222
               

               
Cow position:
               
chr15:41125454-41125661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
104, 7
               

               
Conread position:
               
9-223
               

               
Cow position:
               
chr15:39598360-39598140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
83, 7
               

               
Conread position:
               
9-224
               

               
Cow position:
               
chr15:9107152-9106944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
9-224
               

               
Cow position:
               
chr15:26718804-26719005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
9-224
               

               
Cow position:
               
chr15:31637419-31637189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
148, 9
               

               
Conread position:
               
9-224
               

               
Cow position:
               
chr15:36388409-36388193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
180, 7
               

               
Conread position:
               
9-224
               

               
Cow position:
               
chr15:50322712-50322505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
177, 7
               

               
Conread position:
               
9-226
               

               
Cow position:
               
chr15:225686-225911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
129, 7
               

               
Conread position:
               
9-226
               

               
Cow position:
               
chr15:1722732-1722949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
164, 28
               

               
Conread position:
               
9-226
               

               
Cow position:
               
chr15:31928778-31929006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
167, 7
               

               
Conread position:
               
9-238
               

               
Cow position:
               
chr15:794902-795139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
130, 61
               

               
Conread position:
               
9-243
               

               
Cow position:
               
chr15:22532366-22532127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
83, 7
               

               
Conread position:
               
9-244
               

               
Cow position:
               
chr15:24994395-24994628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
139, 10
               

               
Conread position:
               
9-247
               

               
Cow position:
               
chr15:244899-244653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
139, 7
               

               
Conread position:
               
9-248
               

               
Cow position:
               
chr15:39326399-39326631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
92, 7
               

               
Conread position:
               
9-257
               

               
Cow position:
               
chr15:51307563-51307807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
170, 53
               

               
Conread position:
               
9-261
               

               
Cow position:
               
chr15:27973098-27973347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
130, 61
               

               
Conread position:
               
9-262
               

               
Cow position:
               
chr15:20081890-20081630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
118, 54
               

               
Conread position:
               
9-269
               

               
Cow position:
               
chr15:275771-275495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
120, 7
               

               
Conread position:
               
10-246
               

               
Cow position:
               
chr15:11011484-11011718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
7, 54
               

               
Conread position:
               
12-145
               

               
Cow position:
               
chr15:4093817-4093949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
12-164
               

               
Cow position:
               
chr15:6272773-6272922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 51
               

               
Conread position:
               
12-164
               

               
Cow position:
               
chr15:9497384-9497535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
80, 50
               

               
Conread position:
               
12-168
               

               
Cow position:
               
chr15:10563386-10563542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
6, 51
               

               
Conread position:
               
12-177
               

               
Cow position:
               
chr15:22871726-22871566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
7, 51
               

               
Conread position:
               
12-214
               

               
Cow position:
               
chr15:34140101-34139895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 156
               

               
Conread position:
               
12-216
               

               
Cow position:
               
chr15:33306226-33306022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
7, 32
               

               
Conread position:
               
12-218
               

               
Cow position:
               
chr15:16476622-16476815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 51
               

               
Conread position:
               
12-220
               

               
Cow position:
               
chr15:18671341-18671551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
143, 6
               

               
Conread position:
               
12-224
               

               
Cow position:
               
chr15:3695749-3695531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
7, 50
               

               
Conread position:
               
12-224
               

               
Cow position:
               
chr15:30986178-30986392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
8, 51
               

               
Conread position:
               
12-226
               

               
Cow position:
               
chr15:32234215-32234420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
8, 50
               

               
Conread position:
               
12-226
               

               
Cow position:
               
chr15:36846060-36846295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
12-231
               

               
Cow position:
               
chr15:53716551-53716321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
7, 51
               

               
Conread position:
               
12-246
               

               
Cow position:
               
chr15:3700172-3700410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
7, 42
               

               
Conread position:
               
12-247
               

               
Cow position:
               
chr15:30982056-30981827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
7, 51
               

               
Conread position:
               
12-255
               

               
Cow position:
               
chr15:39405859-39405605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
154, 50
               

               
Conread position:
               
13-134
               

               
Cow position:
               
chr15:3726239-3726119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
13-177
               

               
Cow position:
               
chr15:5726440-5726275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
136, 49
               

               
Conread position:
               
13-226
               

               
Cow position:
               
chr15:49784169-49784389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
5, 51
               

               
Conread position:
               
13-232
               

               
Cow position:
               
chr15:5234887-5235105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
173, 6
               

               
Conread position:
               
13-241
               

               
Cow position:
               
chr15:29604585-29604813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
78, 52
               

               
Conread position:
               
13-241
               

               
Cow position:
               
chr15:47773375-47773603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
13-250
               

               
Cow position:
               
chr15:13395662-13395414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
164, 49
               

               
Conread position:
               
14-166
               

               
Cow position:
               
chr15:41087790-41087936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
14-174
               

               
Cow position:
               
chr15:17763019-17762864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
6, 41
               

               
Conread position:
               
14-222
               

               
Cow position:
               
chr15:5420769-5420987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
7, 48
               

               
Conread position:
               
14-224
               

               
Cow position:
               
chr15:26919161-26919375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
173, 56
               

               
Conread position:
               
14-225
               

               
Cow position:
               
chr15:30316453-30316667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
135, 53
               

               
Conread position:
               
14-226
               

               
Cow position:
               
chr15:28823699-28823920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
14-267
               

               
Cow position:
               
chr15:6970102-6969847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
5, 49
               

               
Conread position:
               
15-164
               

               
Cow position:
               
chr15:17337474-17337327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
15-169
               

               
Cow position:
               
chr15:23275655-23275502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
15-177
               

               
Cow position:
               
chr15:12655804-12655963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
15-214
               

               
Cow position:
               
chr15:14888532-14888733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
140, 46
               

               
Conread position:
               
15-286
               

               
Cow position:
               
chr15:17100597-17100873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
143, 63
               

               
Conread position:
               
16-148
               

               
Cow position:
               
chr15:17870170-17870303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
16-153
               

               
Cow position:
               
chr15:44237529-44237393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
16-160
               

               
Cow position:
               
chr15:16307534-16307390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
76, 46
               

               
Conread position:
               
16-162
               

               
Cow position:
               
chr15:48710945-48711087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
16-164
               

               
Cow position:
               
chr15:35440970-35441113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 46
               

               
Conread position:
               
16-171
               

               
Cow position:
               
chr15:47042517-47042673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 46
               

               
Conread position:
               
16-172
               

               
Cow position:
               
chr15:14281661-14281506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
16-174
               

               
Cow position:
               
chr15:34207082-34207232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
16-175
               

               
Cow position:
               
chr15:14261147-14261303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
16-176
               

               
Cow position:
               
chr15:29331112-29330959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
16-177
               

               
Cow position:
               
chr15:10335866-10335708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
132, 21
               

               
Conread position:
               
16-177
               

               
Cow position:
               
chr15:12870752-12870912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
16-177
               

               
Cow position:
               
chr15:16583584-16583738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
16-177
               

               
Cow position:
               
chr15:21389055-21389211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
16-177
               

               
Cow position:
               
chr15:25650301-25650458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
16-177
               

               
Cow position:
               
chr15:30047434-30047593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
16-181
               

               
Cow position:
               
chr15:52432458-52432291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
16-211
               

               
Cow position:
               
chr15:23696799-23696995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
73, 46
               

               
Conread position:
               
16-215
               

               
Cow position:
               
chr15:27063409-27063614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
16-218
               

               
Cow position:
               
chr15:16543335-16543538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
90, 46
               

               
Conread position:
               
16-222
               

               
Cow position:
               
chr15:25907019-25906813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
76, 46
               

               
Conread position:
               
16-224
               

               
Cow position:
               
chr15:9648595-9648795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
104, 45
               

               
Conread position:
               
16-224
               

               
Cow position:
               
chr15:21821812-21822033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
160, 46
               

               
Conread position:
               
16-224
               

               
Cow position:
               
chr15:36353780-36353560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
158, 51
               

               
Conread position:
               
16-224
               

               
Cow position:
               
chr15:43626581-43626358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
141, 46
               

               
Conread position:
               
16-225
               

               
Cow position:
               
chr15:5730053-5729849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
40, 64
               

               
Conread position:
               
16-225
               

               
Cow position:
               
chr15:27900399-27900612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
143, 44
               

               
Conread position:
               
16-226
               

               
Cow position:
               
chr15:662356-662572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
171, 51
               

               
Conread position:
               
16-226
               

               
Cow position:
               
chr15:11995915-11996136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
141, 51
               

               
Conread position:
               
16-226
               

               
Cow position:
               
chr15:14576440-14576222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
161, 46
               

               
Conread position:
               
16-226
               

               
Cow position:
               
chr15:15025279-15025060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
39, 113
               

               
Conread position:
               
16-226
               

               
Cow position:
               
chr15:26911964-26912176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
146, 46
               

               
Conread position:
               
16-226
               

               
Cow position:
               
chr15:29810231-29810017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
152, 46
               

               
Conread position:
               
16-226
               

               
Cow position:
               
chr15:31495112-31495326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
146, 17
               

               
Conread position:
               
16-226
               

               
Cow position:
               
chr15:46563373-46563585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
170, 20
               

               
Conread position:
               
16-241
               

               
Cow position:
               
chr15:2931454-2931694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
46, 71
               

               
Conread position:
               
16-247
               

               
Cow position:
               
chr15:33643202-33642962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
70, 46
               

               
Conread position:
               
16-247
               

               
Cow position:
               
chr15:40835225-40834985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 24
               

               
Conread position:
               
16-253
               

               
Cow position:
               
chr15:9879265-9879515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
91, 46
               

               
Conread position:
               
16-255
               

               
Cow position:
               
chr15:26442327-26442078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
132, 46
               

               
Conread position:
               
16-256
               

               
Cow position:
               
chr15:20487091-20487343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
75, 46
               

               
Conread position:
               
17-154
               

               
Cow position:
               
chr15:23719372-23719508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
17-157
               

               
Cow position:
               
chr15:22442164-22442306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
17-176
               

               
Cow position:
               
chr15:13554464-13554307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
17-177
               

               
Cow position:
               
chr15:47592562-47592711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
17-177
               

               
Cow position:
               
chr15:48590134-48590288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
17-177
               

               
Cow position:
               
chr15:51632952-51633106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
17-224
               

               
Cow position:
               
chr15:36887946-36887733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
137, 45
               

               
Conread position:
               
17-226
               

               
Cow position:
               
chr15:11908840-11909055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
17-226
               

               
Cow position:
               
chr15:36952093-36952307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
134, 45
               

               
Conread position:
               
17-240
               

               
Cow position:
               
chr15:32324097-32324328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
140, 45
               

               
Conread position:
               
17-242
               

               
Cow position:
               
chr15:37284564-37284355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
17-242
               

               
Cow position:
               
chr15:52317166-52316936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
170, 45
               

               
Conread position:
               
17-256
               

               
Cow position:
               
chr15:15154411-15154161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 50
               

               
Conread position:
               
17-258
               

               
Cow position:
               
chr15:4248259-4248008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
140, 45
               

               
Conread position:
               
17-270
               

               
Cow position:
               
chr15:12304749-12304486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
133, 45
               

               
Conread position:
               
18-163
               

               
Cow position:
               
chr15:40594395-40594541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
131, 44
               

               
Conread position:
               
18-224
               

               
Cow position:
               
chr15:35425704-35425898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
19-173
               

               
Cow position:
               
chr15:30795086-30794936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
19-175
               

               
Cow position:
               
chr15:2389806-2389652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
19-182
               

               
Cow position:
               
chr15:21821095-21820939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
19-214
               

               
Cow position:
               
chr15:921854-921656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
139, 43
               

               
Conread position:
               
22-164
               

               
Cow position:
               
chr15:18587569-18587705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
22-174
               

               
Cow position:
               
chr15:44671229-44671381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
22-177
               

               
Cow position:
               
chr15:10431919-10431764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
127, 40
               

               
Conread position:
               
22-177
               

               
Cow position:
               
chr15:18776645-18776800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
110, 40
               

               
Conread position:
               
22-216
               

               
Cow position:
               
chr15:13669757-13669946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
22-224
               

               
Cow position:
               
chr15:31042975-31042776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
40, 116
               

               
Conread position:
               
22-226
               

               
Cow position:
               
chr15:4178838-4179047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
164, 38
               

               
Conread position:
               
22-226
               

               
Cow position:
               
chr15:26529996-26529788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
148, 40
               

               
Conread position:
               
22-226
               

               
Cow position:
               
chr15:50177215-50177019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
151, 40
               

               
Conread position:
               
22-231
               

               
Cow position:
               
chr15:6905182-6904991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
59, 39
               

               
Conread position:
               
22-267
               

               
Cow position:
               
chr15:19002170-19002431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
37, 253
               

               
Conread position:
               
23-248
               

               
Cow position:
               
chr15:41475726-41475957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
141, 20
               

               
Conread position:
               
24-177
               

               
Cow position:
               
chr15:10456910-10457061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 39
               

               
Conread position:
               
24-177
               

               
Cow position:
               
chr15:31175894-31175745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
103, 46
               

               
Conread position:
               
24-181
               

               
Cow position:
               
chr15:13432589-13432435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
24-181
               

               
Cow position:
               
chr15:50333084-50332928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
136, 38
               

               
Conread position:
               
24-218
               

               
Cow position:
               
chr15:16823039-16822850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
149, 38
               

               
Conread position:
               
24-224
               

               
Cow position:
               
chr15:49132162-49131953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
130, 38
               

               
Conread position:
               
24-226
               

               
Cow position:
               
chr15:36259500-36259705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
149, 43
               

               
Conread position:
               
24-254
               

               
Cow position:
               
chr15:26851122-26851356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
34, 212
               

               
Conread position:
               
25-177
               

               
Cow position:
               
chr15:4485257-4485107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
59, 37
               

               
Conread position:
               
25-182
               

               
Cow position:
               
chr15:22787939-22787782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
129, 45
               

               
Conread position:
               
26-177
               

               
Cow position:
               
chr15:39520270-39520118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
133, 45
               

               
Conread position:
               
26-220
               

               
Cow position:
               
chr15:10442399-10442613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
123, 17
               

               
Conread position:
               
26-224
               

               
Cow position:
               
chr15:38820797-38820596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
27-226
               

               
Cow position:
               
chr15:38827223-38827423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
146, 35
               

               
Conread position:
               
30-247
               

               
Cow position:
               
chr15:5408801-5409023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
157, 12
               

               
Conread position:
               
31-181
               

               
Cow position:
               
chr15:26896597-26896746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
31-226
               

               
Cow position:
               
chr15:22531760-22531565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
156, 31
               

               
Conread position:
               
31-241
               

               
Cow position:
               
chr15:20391177-20391397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 32
               

               
Conread position:
               
32-161
               

               
Cow position:
               
chr15:5279972-5279848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
32-175
               

               
Cow position:
               
chr15:10049217-10049355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
32-217
               

               
Cow position:
               
chr15:49483724-49483527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
127, 34
               

               
Conread position:
               
32-229
               

               
Cow position:
               
chr15:8642213-8641997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
130, 30
               

               
Conread position:
               
35-242
               

               
Cow position:
               
chr15:34223959-34223743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
115, 27
               

               
Conread position:
               
37-231
               

               
Cow position:
               
chr15:4500796-4500585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
37-256
               

               
Cow position:
               
chr15:12314648-12314428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 11
               

               
Conread position:
               
39-258
               

               
Cow position:
               
chr15:15992554-15992780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
118, 23
               

               
Conread position:
               
40-224
               

               
Cow position:
               
chr15:41534738-41534559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
41-223
               

               
Cow position:
               
chr15:28099199-28099007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
135, 22
               

               
Conread position:
               
42-224
               

               
Cow position:
               
chr15:503266-503434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
43-168
               

               
Cow position:
               
chr15:24953438-24953560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
43-224
               

               
Cow position:
               
chr15:43715412-43715224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
47-224
               

               
Cow position:
               
chr15:14964086-14964266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
126, 15
               

               
Conread position:
               
50-243
               

               
Cow position:
               
chr15:8331123-8331323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
52-225
               

               
Cow position:
               
chr15:24967870-24967694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
55-226
               

               
Cow position:
               
chr15:12723163-12722976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
55-242
               

               
Cow position:
               
chr15:27975797-27975997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
102, 176
               

               
Conread position:
               
55-248
               

               
Cow position:
               
chr15:20566985-20566789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
122, 8
               

               
Conread position:
               
61-224
               

               
Cow position:
               
chr15:12913430-12913605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
65-250
               

               
Cow position:
               
chr15:51558468-51558274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
20, 174
               

               
Conread position:
               
67-224
               

               
Cow position:
               
chr15:20047648-20047496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
99, 70
               

               
Conread position:
               
69-226
               

               
Cow position:
               
chr15:48819105-48818945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
71-229
               

               
Cow position:
               
chr15:40000979-40000815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 14
               

               
Conread position:
               
72-223
               

               
Cow position:
               
chr15:18703878-18704038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
72-224
               

               
Cow position:
               
chr15:840091-840253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
72-226
               

               
Cow position:
               
chr15:5710459-5710304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
107, 71
               

               
Conread position:
               
90-226
               

               
Cow position:
               
chr15:27927175-27927036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
73, 103
               

               
Conread position:
               
96-255
               

               
Cow position:
               
chr15:47920117-47920283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
76, 145
               

               
Conread position:
               
97-245
               

               
Cow position:
               
chr15:9128639-9128796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
107-247
               

               
Cow position:
               
chr15:13513554-13513404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 44
               
Show alignments to all cow chromosomes.