Cow genome map

Conread name: Ss1.1-Pig3-SRG8023H09.5

Conread position: 3-185
Cow position: chr21:40291715-40291537 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 174, 17

Conread position: 4-173
Cow position: chr21:44592178-44592013 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 5-178
Cow position: chr21:47363705-47363531 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 57, 11

Conread position: 5-224
Cow position: chr21:6713494-6713265 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 57, 15

Conread position: 5-224
Cow position: chr21:21615810-21616035 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 6, 59

Conread position: 5-226
Cow position: chr21:8349360-8349583 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 63

Conread position: 5-247
Cow position: chr21:297784-298009 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 169, 56

Conread position: 6-138
Cow position: chr21:20183102-20183233 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 86, 56

Conread position: 6-147
Cow position: chr21:15911434-15911571 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 6-156
Cow position: chr21:45262781-45262630 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 5, 59

Conread position: 6-163
Cow position: chr21:18800509-18800347 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 15, 84

Conread position: 6-170
Cow position: chr21:29002123-29001963 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 10

Conread position: 6-172
Cow position: chr21:42414066-42413900 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 151, 10

Conread position: 6-176
Cow position: chr21:7268851-7268682 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 57

Conread position: 6-177
Cow position: chr21:42841566-42841396 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 86, 56

Conread position: 6-216
Cow position: chr21:41287761-41287545 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 180, 10

Conread position: 6-220
Cow position: chr21:9416280-9416496 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 56

Conread position: 6-226
Cow position: chr21:643357-643581 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 168, 10

Conread position: 6-226
Cow position: chr21:34654105-34654331 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 175, 48

Conread position: 6-240
Cow position: chr21:28030321-28030551 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 187
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 86, 10

Conread position: 6-240
Cow position: chr21:28907512-28907275 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 101, 14

Conread position: 6-244
Cow position: chr21:11740089-11739841 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 14, 57

Conread position: 6-244
Cow position: chr21:19868924-19868686 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 23

Conread position: 6-245
Cow position: chr21:23568254-23568502 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 232

Conread position: 7-222
Cow position: chr21:7169720-7169944 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 5

Conread position: 7-224
Cow position: chr21:36763093-36763321 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 147, 60

Conread position: 7-225
Cow position: chr21:28244504-28244727 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 152, 9

Conread position: 7-226
Cow position: chr21:641618-641845 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 177
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 12, 56

Conread position: 7-226
Cow position: chr21:4280639-4280426 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 81, 15

Conread position: 9-152
Cow position: chr21:724849-724703 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 105, 13

Conread position: 9-164
Cow position: chr21:15976667-15976820 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 9-173
Cow position: chr21:43259252-43259416 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 59

Conread position: 9-176
Cow position: chr21:395903-396068 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 164, 7

Conread position: 9-177
Cow position: chr21:9418120-9417957 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 9-177
Cow position: chr21:10538222-10538054 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 54

Conread position: 9-177
Cow position: chr21:33350777-33350942 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 136
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 83, 9

Conread position: 9-177
Cow position: chr21:46264207-46264371 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 9-185
Cow position: chr21:19258857-19259028 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 148, 7

Conread position: 9-190
Cow position: chr21:25383059-25383241 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 9

Conread position: 9-194
Cow position: chr21:28924144-28924330 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 83, 7

Conread position: 9-217
Cow position: chr21:17642949-17642748 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 9-222
Cow position: chr21:47465083-47464862 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 146, 7

Conread position: 9-224
Cow position: chr21:5898367-5898150 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 175, 56

Conread position: 9-224
Cow position: chr21:6051536-6051764 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 54

Conread position: 9-224
Cow position: chr21:31159437-31159645 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 168, 7

Conread position: 9-224
Cow position: chr21:36508272-36508489 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 154, 53

Conread position: 9-224
Cow position: chr21:46451917-46451713 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 7, 0

Conread position: 9-226
Cow position: chr21:3585333-3585103 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 146, 7

Conread position: 9-226
Cow position: chr21:4399839-4400054 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 183, 19

Conread position: 9-226
Cow position: chr21:17252943-17252716 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 139, 13

Conread position: 9-226
Cow position: chr21:42144861-42145080 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 7

Conread position: 9-234
Cow position: chr21:22014225-22014460 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 148, 7

Conread position: 9-238
Cow position: chr21:38449410-38449178 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 137, 7

Conread position: 9-243
Cow position: chr21:12104400-12104631 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 66, 7

Conread position: 9-243
Cow position: chr21:30592269-30592040 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 185
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 177, 9

Conread position: 9-243
Cow position: chr21:41590530-41590288 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 160, 10

Conread position: 9-244
Cow position: chr21:16498554-16498794 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 183
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 165, 7

Conread position: 9-248
Cow position: chr21:29978725-29978491 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 217, 10

Conread position: 9-248
Cow position: chr21:40266160-40266412 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 132, 7

Conread position: 9-251
Cow position: chr21:28919488-28919244 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 180, 7

Conread position: 9-256
Cow position: chr21:17183957-17184214 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 168, 9

Conread position: 9-256
Cow position: chr21:32297484-32297218 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 140, 7

Conread position: 10-226
Cow position: chr21:30222379-30222603 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 9, 54

Conread position: 12-144
Cow position: chr21:2679594-2679716 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 12-153
Cow position: chr21:33210226-33210365 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 6

Conread position: 12-157
Cow position: chr21:28191072-28191213 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 12-157
Cow position: chr21:29014523-29014377 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 56

Conread position: 12-161
Cow position: chr21:41046843-41046991 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 6, 51

Conread position: 12-165
Cow position: chr21:18828266-18828115 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 49

Conread position: 12-167
Cow position: chr21:5392500-5392346 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 6, 51

Conread position: 12-173
Cow position: chr21:44825851-44825690 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 75, 7

Conread position: 12-174
Cow position: chr21:9990547-9990708 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 7, 19

Conread position: 12-177
Cow position: chr21:29485018-29485179 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 136
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 7, 52

Conread position: 12-224
Cow position: chr21:46599399-46599617 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 162, 6

Conread position: 12-224
Cow position: chr21:47764079-47763867 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 153, 6

Conread position: 12-226
Cow position: chr21:8426483-8426704 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 173, 50

Conread position: 12-226
Cow position: chr21:22850958-22851176 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 5, 26

Conread position: 12-226
Cow position: chr21:24858352-24858577 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 164, 50

Conread position: 12-226
Cow position: chr21:44214163-44214372 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 7, 51

Conread position: 12-229
Cow position: chr21:42007425-42007204 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 40

Conread position: 12-231
Cow position: chr21:868888-868653 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 8, 51

Conread position: 12-245
Cow position: chr21:71623-71863 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 186
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 7, 50

Conread position: 12-245
Cow position: chr21:14452270-14452511 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 7, 59

Conread position: 12-247
Cow position: chr21:12339677-12339898 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 6, 41

Conread position: 12-251
Cow position: chr21:39393784-39394033 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 7, 51

Conread position: 12-271
Cow position: chr21:10004849-10004572 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 7, 51

Conread position: 13-177
Cow position: chr21:27569131-27568971 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 151, 49

Conread position: 13-226
Cow position: chr21:802279-802062 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 162, 49

Conread position: 14-157
Cow position: chr21:7581867-7581724 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 6, 49

Conread position: 14-277
Cow position: chr21:47719261-47718996 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 6, 50

Conread position: 15-155
Cow position: chr21:7394246-7394110 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 15-162
Cow position: chr21:31147894-31147750 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 15-164
Cow position: chr21:36297533-36297682 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 76, 46

Conread position: 15-175
Cow position: chr21:38692239-38692395 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 17, 48

Conread position: 15-219
Cow position: chr21:19240833-19240624 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 130, 47

Conread position: 15-225
Cow position: chr21:38121141-38121339 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 179, 47

Conread position: 15-226
Cow position: chr21:6851212-6851426 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 76, 48

Conread position: 15-226
Cow position: chr21:27229751-27229542 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 146, 46

Conread position: 15-234
Cow position: chr21:742327-742543 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 170, 50

Conread position: 15-248
Cow position: chr21:38720292-38720532 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 142, 12

Conread position: 16-157
Cow position: chr21:30835407-30835544 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 16-166
Cow position: chr21:42348650-42348508 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 123
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 16-172
Cow position: chr21:7088641-7088798 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 121, 51

Conread position: 16-172
Cow position: chr21:8625219-8625369 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 16-176
Cow position: chr21:11057837-11057681 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 16-176
Cow position: chr21:26244955-26245114 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 16-177
Cow position: chr21:12801708-12801548 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 132
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 46, 133

Conread position: 16-177
Cow position: chr21:13585018-13584860 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 141, 34

Conread position: 16-177
Cow position: chr21:30250160-30250003 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 141, 46

Conread position: 16-177
Cow position: chr21:33563049-33563204 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 16-177
Cow position: chr21:35437446-35437288 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 76, 55

Conread position: 16-181
Cow position: chr21:21169451-21169293 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 46

Conread position: 16-185
Cow position: chr21:829167-828998 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 134, 45

Conread position: 16-217
Cow position: chr21:22861043-22861244 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 159, 45

Conread position: 16-222
Cow position: chr21:20160717-20160935 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 143, 46

Conread position: 16-224
Cow position: chr21:977107-976890 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 106, 45

Conread position: 16-224
Cow position: chr21:6997981-6998200 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 16-224
Cow position: chr21:22210205-22209984 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 141, 46

Conread position: 16-224
Cow position: chr21:23586923-23587131 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 76, 51

Conread position: 16-224
Cow position: chr21:24598699-24598902 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 42

Conread position: 16-224
Cow position: chr21:33982766-33982555 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 77, 47

Conread position: 16-224
Cow position: chr21:37479996-37480223 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 70, 47

Conread position: 16-224
Cow position: chr21:38900815-38901022 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 172, 46

Conread position: 16-226
Cow position: chr21:674726-674929 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 154, 45

Conread position: 16-226
Cow position: chr21:957714-957930 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 155, 53

Conread position: 16-226
Cow position: chr21:11644925-11644705 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 132, 47

Conread position: 16-226
Cow position: chr21:20163749-20163969 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 172
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 153, 46

Conread position: 16-226
Cow position: chr21:29069286-29069062 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 64, 47

Conread position: 16-226
Cow position: chr21:31279297-31279514 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 135, 51

Conread position: 16-241
Cow position: chr21:31691526-31691737 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 16-242
Cow position: chr21:45906581-45906346 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 26

Conread position: 16-247
Cow position: chr21:36682366-36682608 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 189
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 76, 46

Conread position: 16-256
Cow position: chr21:7768479-7768718 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 226, 44

Conread position: 17-185
Cow position: chr21:3360971-3360804 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 24

Conread position: 17-223
Cow position: chr21:46849085-46848875 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 169, 51

Conread position: 17-225
Cow position: chr21:24875394-24875612 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 55, 44

Conread position: 17-246
Cow position: chr21:25764678-25764896 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 45, 0

Conread position: 18-168
Cow position: chr21:30980534-30980386 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 125
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 44, 0

Conread position: 18-176
Cow position: chr21:5486471-5486311 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 75, 44

Conread position: 18-177
Cow position: chr21:5342051-5341894 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 134
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 44, 0

Conread position: 18-226
Cow position: chr21:7673166-7673374 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 141, 44

Conread position: 18-234
Cow position: chr21:37299505-37299729 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 130, 45

Conread position: 19-168
Cow position: chr21:9027358-9027509 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 112

Conread position: 19-229
Cow position: chr21:16569945-16570153 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 179, 43

Conread position: 22-167
Cow position: chr21:33263891-33264035 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 124, 40

Conread position: 22-176
Cow position: chr21:19360129-19359976 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 129
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 40, 0

Conread position: 22-177
Cow position: chr21:28237659-28237507 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 22-177
Cow position: chr21:30157758-30157605 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 40

Conread position: 22-184
Cow position: chr21:13365390-13365548 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 22-224
Cow position: chr21:25014979-25014781 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 143, 43

Conread position: 22-226
Cow position: chr21:32339693-32339484 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 156, 40

Conread position: 22-266
Cow position: chr21:4281828-4281583 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 137, 40

Conread position: 23-177
Cow position: chr21:27624746-27624900 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 141, 39

Conread position: 24-177
Cow position: chr21:42465829-42465990 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 55, 39

Conread position: 24-183
Cow position: chr21:30243632-30243475 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 70, 38

Conread position: 24-242
Cow position: chr21:42135567-42135343 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 157, 43

Conread position: 26-174
Cow position: chr21:5149247-5149398 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 26-176
Cow position: chr21:14228229-14228079 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 147, 36

Conread position: 26-248
Cow position: chr21:82118-82338 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 181
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 66, 36

Conread position: 26-248
Cow position: chr21:32559314-32559084 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 139, 36

Conread position: 27-177
Cow position: chr21:26567725-26567576 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 136, 26

Conread position: 27-248
Cow position: chr21:40820801-40820567 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 150, 40

Conread position: 28-226
Cow position: chr21:11182606-11182810 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 149, 34

Conread position: 28-226
Cow position: chr21:25012135-25012339 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 157, 35

Conread position: 29-255
Cow position: chr21:15012493-15012721 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 141, 33

Conread position: 30-164
Cow position: chr21:23322023-23321890 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 30-175
Cow position: chr21:41450437-41450580 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 33

Conread position: 31-226
Cow position: chr21:14126337-14126533 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 139, 30

Conread position: 31-241
Cow position: chr21:41522356-41522137 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 119, 32

Conread position: 32-226
Cow position: chr21:26735466-26735658 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 143, 30

Conread position: 32-234
Cow position: chr21:39403468-39403258 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 116, 30

Conread position: 33-231
Cow position: chr21:8506487-8506281 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 144, 7

Conread position: 33-231
Cow position: chr21:8509375-8509169 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 144, 7

Conread position: 34-248
Cow position: chr21:40059087-40059299 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 28, 118

Conread position: 35-254
Cow position: chr21:20174378-20174599 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 82, 27

Conread position: 37-234
Cow position: chr21:30657932-30658130 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 136, 26

Conread position: 42-177
Cow position: chr21:25159236-25159372 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 44-172
Cow position: chr21:41598237-41598361 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 44-226
Cow position: chr21:13883550-13883738 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 18

Conread position: 45-177
Cow position: chr21:11363736-11363871 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 23

Conread position: 46-174
Cow position: chr21:30622710-30622836 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 47-181
Cow position: chr21:27810462-27810592 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 48-216
Cow position: chr21:14760638-14760808 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 136, 14

Conread position: 48-224
Cow position: chr21:37495873-37495685 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 11

Conread position: 48-243
Cow position: chr21:40930402-40930201 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 126, 22

Conread position: 52-274
Cow position: chr21:30031310-30031082 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 7

Conread position: 55-226
Cow position: chr21:6945453-6945621 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 126

Conread position: 56-226
Cow position: chr21:41737987-41738169 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 56-246
Cow position: chr21:27744104-27744311 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 92

Conread position: 61-177
Cow position: chr21:35569279-35569159 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 63-295
Cow position: chr21:9710641-9710416 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 190, 15

Conread position: 67-231
Cow position: chr21:11678221-11678056 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 102, 82

Conread position: 67-250
Cow position: chr21:7460698-7460890 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 83, 177

Conread position: 70-225
Cow position: chr21:23672839-23673005 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 72-267
Cow position: chr21:31462658-31462864 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 78-177
Cow position: chr21:6041886-6041985 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 90-237
Cow position: chr21:9314919-9315072 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 142

Conread position: 93-242
Cow position: chr21:44658684-44658838 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 94-241
Cow position: chr21:23783724-23783572 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 115

Conread position: 97-254
Cow position: chr21:30368197-30368363 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 66, 0

Show alignments to all cow chromosomes.