Cow genome map

Conread name: Ss1.1-Pig3-SRG8023H09.5

Conread position: 1-177
Cow position:
Alignm length: 180
Alignm identity: 137
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 13, 63

Conread position: 5-175
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 5-212
Cow position:
Alignm length: 210
Alignm identity: 160
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 14, 63

Conread position: 5-231
Cow position:
Alignm length: 237
Alignm identity: 166
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 172, 14

Conread position: 6-148
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 6-163
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 56, 146

Conread position: 6-164
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 116, 56

Conread position: 6-172
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 13, 23

Conread position: 6-175
Cow position:
Alignm length: 171
Alignm identity: 136
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 13, 6

Conread position: 6-177
Cow position:
Alignm length: 173
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 14, 57

Conread position: 6-224
Cow position:
Alignm length: 220
Alignm identity: 172
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 151, 10

Conread position: 6-226
Cow position:
Alignm length: 231
Alignm identity: 173
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 158, 56

Conread position: 6-231
Cow position:
Alignm length: 245
Alignm identity: 191
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 150, 54

Conread position: 6-243
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 170, 10

Conread position: 6-247
Cow position:
Alignm length: 251
Alignm identity: 186
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 12, 58

Conread position: 7-248
Cow position:
Alignm length: 251
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 55

Conread position: 8-169
Cow position:
Alignm length: 162
Alignm identity: 135
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 14, 0

Conread position: 8-181
Cow position:
Alignm length: 174
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 8-198
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 9-167
Cow position:
Alignm length: 160
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 148, 53

Conread position: 9-174
Cow position:
Alignm length: 167
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 83, 7

Conread position: 9-177
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 42, 54

Conread position: 9-177
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 48, 144

Conread position: 9-215
Cow position:
Alignm length: 216
Alignm identity: 163
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 83, 7

Conread position: 9-223
Cow position:
Alignm length: 226
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 149, 7

Conread position: 9-224
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 167, 53

Conread position: 9-224
Cow position:
Alignm length: 229
Alignm identity: 167
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 139, 7

Conread position: 9-224
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 140, 53

Conread position: 9-229
Cow position:
Alignm length: 231
Alignm identity: 170
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 165, 7

Conread position: 9-244
Cow position:
Alignm length: 249
Alignm identity: 178
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 139, 7

Conread position: 9-255
Cow position:
Alignm length: 257
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 7

Conread position: 10-177
Cow position:
Alignm length: 168
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 6, 0

Conread position: 10-247
Cow position:
Alignm length: 242
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 54

Conread position: 10-248
Cow position:
Alignm length: 249
Alignm identity: 173
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 9, 49

Conread position: 12-144
Cow position:
Alignm length: 133
Alignm identity: 100
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 12-147
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 12-177
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 7, 65

Conread position: 12-181
Cow position:
Alignm length: 171
Alignm identity: 135
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 7, 51

Conread position: 12-182
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 5, 51

Conread position: 12-224
Cow position:
Alignm length: 225
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 50

Conread position: 12-226
Cow position:
Alignm length: 225
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 147, 50

Conread position: 12-246
Cow position:
Alignm length: 240
Alignm identity: 177
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 5, 51

Conread position: 12-249
Cow position:
Alignm length: 246
Alignm identity: 175
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 11, 51

Conread position: 12-267
Cow position:
Alignm length: 271
Alignm identity: 187
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 7, 45

Conread position: 13-161
Cow position:
Alignm length: 149
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 13-245
Cow position:
Alignm length: 234
Alignm identity: 168
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 161, 49

Conread position: 14-174
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 14-177
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 14-218
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 6, 49

Conread position: 14-226
Cow position:
Alignm length: 220
Alignm identity: 165
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 160, 53

Conread position: 14-226
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 152, 48

Conread position: 14-227
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 6, 36

Conread position: 14-245
Cow position:
Alignm length: 242
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 49

Conread position: 15-174
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 15-177
Cow position:
Alignm length: 163
Alignm identity: 132
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 7, 0

Conread position: 15-177
Cow position:
Alignm length: 166
Alignm identity: 119
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 142, 47

Conread position: 15-224
Cow position:
Alignm length: 213
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 158, 46

Conread position: 15-231
Cow position:
Alignm length: 217
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 15-248
Cow position:
Alignm length: 239
Alignm identity: 170
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 101, 47

Conread position: 15-248
Cow position:
Alignm length: 238
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 160, 50

Conread position: 16-147
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 101, 46

Conread position: 16-154
Cow position:
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 16-170
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 132, 52

Conread position: 16-171
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 16-173
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 16-175
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 134, 31

Conread position: 16-177
Cow position:
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 141, 46

Conread position: 16-177
Cow position:
Alignm length: 162
Alignm identity: 127
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 16-177
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 16-177
Cow position:
Alignm length: 163
Alignm identity: 129
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 134, 45

Conread position: 16-181
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 133, 47

Conread position: 16-223
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 160, 46

Conread position: 16-224
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 161, 46

Conread position: 16-224
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 167, 12

Conread position: 16-225
Cow position:
Alignm length: 222
Alignm identity: 167
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 102, 46

Conread position: 16-226
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 161, 51

Conread position: 16-226
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 132, 27

Conread position: 16-226
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 143, 46

Conread position: 16-231
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 143, 48

Conread position: 16-244
Cow position:
Alignm length: 234
Alignm identity: 159
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 76, 54

Conread position: 16-245
Cow position:
Alignm length: 238
Alignm identity: 176
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 169, 46

Conread position: 16-247
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 154, 46

Conread position: 17-157
Cow position:
Alignm length: 141
Alignm identity: 115
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 17-173
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 45

Conread position: 17-175
Cow position:
Alignm length: 159
Alignm identity: 129
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 45, 0

Conread position: 17-177
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 158, 29

Conread position: 17-177
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 138, 20

Conread position: 17-225
Cow position:
Alignm length: 225
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 65

Conread position: 17-225
Cow position:
Alignm length: 214
Alignm identity: 147
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 170, 50

Conread position: 17-243
Cow position:
Alignm length: 236
Alignm identity: 181
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 69, 47

Conread position: 18-176
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 18-224
Cow position:
Alignm length: 210
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 147, 44

Conread position: 18-245
Cow position:
Alignm length: 233
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 159, 42

Conread position: 22-189
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 157, 43

Conread position: 22-225
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 151, 43

Conread position: 22-225
Cow position:
Alignm length: 214
Alignm identity: 162
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 151, 40

Conread position: 22-254
Cow position:
Alignm length: 245
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 104, 40

Conread position: 22-255
Cow position:
Alignm length: 235
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 135, 40

Conread position: 22-256
Cow position:
Alignm length: 252
Alignm identity: 179
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 70, 29

Conread position: 24-224
Cow position:
Alignm length: 211
Alignm identity: 163
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 28, 0

Conread position: 24-226
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 152, 39

Conread position: 24-226
Cow position:
Alignm length: 211
Alignm identity: 160
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 161, 34

Conread position: 24-248
Cow position:
Alignm length: 234
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 163, 38

Conread position: 25-185
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 126, 38

Conread position: 25-212
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 125, 36

Conread position: 26-227
Cow position:
Alignm length: 204
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 59, 35

Conread position: 27-155
Cow position:
Alignm length: 130
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 99, 35

Conread position: 27-226
Cow position:
Alignm length: 213
Alignm identity: 159
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 11, 38

Conread position: 28-176
Cow position:
Alignm length: 150
Alignm identity: 126
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 63, 39

Conread position: 28-224
Cow position:
Alignm length: 205
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 158, 34

Conread position: 30-231
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 155, 31

Conread position: 35-185
Cow position:
Alignm length: 152
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 139, 27

Conread position: 36-235
Cow position:
Alignm length: 210
Alignm identity: 157
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 138, 26

Conread position: 36-267
Cow position:
Alignm length: 237
Alignm identity: 166
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 155, 26

Conread position: 41-224
Cow position:
Alignm length: 196
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 124, 21

Conread position: 41-224
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 105, 16

Conread position: 42-225
Cow position:
Alignm length: 199
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 87, 20

Conread position: 44-224
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 24

Conread position: 45-248
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 144, 18

Conread position: 46-226
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 139, 17

Conread position: 47-224
Cow position:
Alignm length: 188
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 126, 15

Conread position: 49-268
Cow position:
Alignm length: 221
Alignm identity: 167
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 182, 13

Conread position: 52-225
Cow position:
Alignm length: 177
Alignm identity: 135
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 40, 10

Conread position: 54-177
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 55-238
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 100, 12

Conread position: 56-172
Cow position:
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 60-247
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 117, 10

Conread position: 62-224
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 66-242
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 108, 129

Conread position: 68-247
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 38, 19

Conread position: 69-216
Cow position:
Alignm length: 149
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 114, 95

Conread position: 70-226
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 15

Conread position: 72-226
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 30

Show alignments to all cow chromosomes.