Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8023H09.5 |
| Conread position: | 2-241 |
| Cow position: | chr3:33252950-33252706 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 18, 12 |
| Conread position: | 2-247 |
| Cow position: | chr3:49344630-49344884 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 9, 62 |
| Conread position: | 3-176 |
| Cow position: | chr3:9120785-9120954 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 16, 9 |
| Conread position: | 4-169 |
| Cow position: | chr3:21641929-21642092 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 9 |
| Conread position: | 4-229 |
| Cow position: | chr3:76922715-76922497 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 179, 10 |
| Conread position: | 4-243 |
| Cow position: | chr3:7331184-7330951 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 13, 59 |
| Conread position: | 4-246 |
| Cow position: | chr3:19792847-19793087 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 122, 14 |
| Conread position: | 5-157 |
| Cow position: | chr3:26219108-26218960 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 5-159 |
| Cow position: | chr3:62826680-62826524 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 27, 13 |
| Conread position: | 5-175 |
| Cow position: | chr3:74134646-74134815 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 5-176 |
| Cow position: | chr3:55984041-55984210 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 5-186 |
| Cow position: | chr3:84175880-84175702 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 5-203 |
| Cow position: | chr3:35621246-35621442 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 13, 60 |
| Conread position: | 5-225 |
| Cow position: | chr3:15153632-15153860 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 11, 58 |
| Conread position: | 5-225 |
| Cow position: | chr3:36160251-36160028 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 166, 62 |
| Conread position: | 5-226 |
| Cow position: | chr3:49327886-49328107 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 143, 57 |
| Conread position: | 5-226 |
| Cow position: | chr3:75173637-75173427 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 180, 13 |
| Conread position: | 5-243 |
| Cow position: | chr3:60264776-60264532 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 191 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 9, 59 |
| Conread position: | 6-169 |
| Cow position: | chr3:67704488-67704651 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 14, 57 |
| Conread position: | 6-176 |
| Cow position: | chr3:53508553-53508723 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 12, 57 |
| Conread position: | 6-177 |
| Cow position: | chr3:13507411-13507581 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 6-177 |
| Cow position: | chr3:17447670-17447502 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 17, 58 |
| Conread position: | 6-177 |
| Cow position: | chr3:21997844-21997675 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 6-177 |
| Cow position: | chr3:30222134-30222305 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 150, 13 |
| Conread position: | 6-177 |
| Cow position: | chr3:44330493-44330322 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 152, 17 |
| Conread position: | 6-177 |
| Cow position: | chr3:56704377-56704208 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 6-177 |
| Cow position: | chr3:70899836-70900003 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 130, 56 |
| Conread position: | 6-194 |
| Cow position: | chr3:48810701-48810518 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 178, 10 |
| Conread position: | 6-224 |
| Cow position: | chr3:26904054-26904270 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 101, 10 |
| Conread position: | 6-224 |
| Cow position: | chr3:74533293-74533505 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 6-225 |
| Cow position: | chr3:74584149-74584362 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 11, 63 |
| Conread position: | 6-226 |
| Cow position: | chr3:17936897-17936674 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 13, 58 |
| Conread position: | 6-226 |
| Cow position: | chr3:20841929-20841706 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 158, 10 |
| Conread position: | 6-226 |
| Cow position: | chr3:52652137-52651907 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 82, 10 |
| Conread position: | 6-231 |
| Cow position: | chr3:71423608-71423391 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 6-241 |
| Cow position: | chr3:3889623-3889389 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 12 |
| Conread position: | 6-241 |
| Cow position: | chr3:14546946-14547187 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 168, 10 |
| Conread position: | 6-241 |
| Cow position: | chr3:29828206-29827983 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 13, 57 |
| Conread position: | 6-241 |
| Cow position: | chr3:53790594-53790355 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 5, 29 |
| Conread position: | 6-241 |
| Cow position: | chr3:60597487-60597725 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 130, 59 |
| Conread position: | 7-143 |
| Cow position: | chr3:3471984-3472119 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 13, 5 |
| Conread position: | 8-162 |
| Cow position: | chr3:55272099-55271947 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 8-176 |
| Cow position: | chr3:59208750-59208906 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 9-135 |
| Cow position: | chr3:23444941-23444817 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 9-149 |
| Cow position: | chr3:59101778-59101912 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 9-152 |
| Cow position: | chr3:83815840-83815700 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 9-154 |
| Cow position: | chr3:15506395-15506538 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 9-155 |
| Cow position: | chr3:66292229-66292085 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 9-161 |
| Cow position: | chr3:7427949-7428095 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 9-165 |
| Cow position: | chr3:23667567-23667721 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 61, 7 |
| Conread position: | 9-167 |
| Cow position: | chr3:60265304-60265151 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 9-168 |
| Cow position: | chr3:55835875-55835716 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 139, 53 |
| Conread position: | 9-168 |
| Cow position: | chr3:63177430-63177586 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 9-172 |
| Cow position: | chr3:73460913-73461074 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 9-175 |
| Cow position: | chr3:63179803-63179964 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 9-175 |
| Cow position: | chr3:71497192-71497025 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 150, 53 |
| Conread position: | 9-175 |
| Cow position: | chr3:74900693-74900532 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 75, 7 |
| Conread position: | 9-176 |
| Cow position: | chr3:53046712-53046549 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 151, 7 |
| Conread position: | 9-177 |
| Cow position: | chr3:59621701-59621535 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 9-178 |
| Cow position: | chr3:36913996-36914169 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 130, 53 |
| Conread position: | 9-178 |
| Cow position: | chr3:82629263-82629429 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 9-181 |
| Cow position: | chr3:7661802-7661969 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 9-189 |
| Cow position: | chr3:74802119-74801943 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 9-190 |
| Cow position: | chr3:15173027-15173207 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 9-216 |
| Cow position: | chr3:74079689-74079475 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 168, 7 |
| Conread position: | 9-219 |
| Cow position: | chr3:57274008-57274224 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 77, 7 |
| Conread position: | 9-222 |
| Cow position: | chr3:15751766-15751554 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 83, 32 |
| Conread position: | 9-223 |
| Cow position: | chr3:18001144-18001356 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 186, 54 |
| Conread position: | 9-224 |
| Cow position: | chr3:15052002-15051781 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 92, 52 |
| Conread position: | 9-224 |
| Cow position: | chr3:54982133-54981920 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 125, 52 |
| Conread position: | 9-224 |
| Cow position: | chr3:70895991-70896210 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 53, 5 |
| Conread position: | 9-224 |
| Cow position: | chr3:73764247-73764044 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 141, 7 |
| Conread position: | 9-224 |
| Cow position: | chr3:76155935-76156157 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 9-224 |
| Cow position: | chr3:78077130-78077361 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 10, 54 |
| Conread position: | 9-225 |
| Cow position: | chr3:59610772-59610547 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 146, 53 |
| Conread position: | 9-226 |
| Cow position: | chr3:10958293-10958071 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 168, 7 |
| Conread position: | 9-226 |
| Cow position: | chr3:54782061-54781820 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 52, 7 |
| Conread position: | 9-226 |
| Cow position: | chr3:71474457-71474234 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 156, 7 |
| Conread position: | 9-227 |
| Cow position: | chr3:31361367-31361597 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 52, 7 |
| Conread position: | 9-228 |
| Cow position: | chr3:10668932-10668704 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 114, 7 |
| Conread position: | 9-240 |
| Cow position: | chr3:75608447-75608673 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 156, 7 |
| Conread position: | 9-243 |
| Cow position: | chr3:54506654-54506896 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 7 |
| Conread position: | 9-243 |
| Cow position: | chr3:69650942-69650708 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 162, 7 |
| Conread position: | 9-244 |
| Cow position: | chr3:7337835-7337596 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 168, 13 |
| Conread position: | 9-244 |
| Cow position: | chr3:67626396-67626169 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 50, 13 |
| Conread position: | 9-246 |
| Cow position: | chr3:33002339-33002575 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 97, 35 |
| Conread position: | 9-247 |
| Cow position: | chr3:3946985-3947215 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 9-250 |
| Cow position: | chr3:50768624-50768875 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 11, 54 |
| Conread position: | 9-254 |
| Cow position: | chr3:61224797-61224550 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 126, 13 |
| Conread position: | 9-255 |
| Cow position: | chr3:18059649-18059910 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 7 |
| Conread position: | 9-258 |
| Cow position: | chr3:56949141-56948891 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 180, 9 |
| Conread position: | 9-258 |
| Cow position: | chr3:74754273-74754519 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 164, 13 |
| Conread position: | 9-262 |
| Cow position: | chr3:59604793-59605051 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 165, 7 |
| Conread position: | 9-266 |
| Cow position: | chr3:77271331-77271072 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 174, 52 |
| Conread position: | 9-267 |
| Cow position: | chr3:73237143-73237392 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 10-176 |
| Cow position: | chr3:26874542-26874703 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 9, 50 |
| Conread position: | 10-224 |
| Cow position: | chr3:17331676-17331890 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 9, 39 |
| Conread position: | 10-254 |
| Cow position: | chr3:12705597-12705343 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 7, 58 |
| Conread position: | 12-152 |
| Cow position: | chr3:11292298-11292160 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 12-164 |
| Cow position: | chr3:64648440-64648592 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 9, 52 |
| Conread position: | 12-171 |
| Cow position: | chr3:56059759-56059918 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 5, 51 |
| Conread position: | 12-173 |
| Cow position: | chr3:58968955-58968798 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 7, 51 |
| Conread position: | 12-174 |
| Cow position: | chr3:12711965-12711805 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 12-174 |
| Cow position: | chr3:81371596-81371759 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 58 |
| Conread position: | 12-176 |
| Cow position: | chr3:47753174-47753338 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 7, 52 |
| Conread position: | 12-177 |
| Cow position: | chr3:16752310-16752146 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 9, 51 |
| Conread position: | 12-177 |
| Cow position: | chr3:22716349-22716183 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 102, 49 |
| Conread position: | 12-177 |
| Cow position: | chr3:80072077-80072244 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 9, 51 |
| Conread position: | 12-185 |
| Cow position: | chr3:73708995-73709171 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 7, 51 |
| Conread position: | 12-222 |
| Cow position: | chr3:73299030-73299234 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 137, 50 |
| Conread position: | 12-224 |
| Cow position: | chr3:31804817-31804599 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 49, 118 |
| Conread position: | 12-224 |
| Cow position: | chr3:70609580-70609796 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 7, 51 |
| Conread position: | 12-224 |
| Cow position: | chr3:75479953-75480169 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 136, 10 |
| Conread position: | 12-226 |
| Cow position: | chr3:44932464-44932685 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 7, 51 |
| Conread position: | 12-226 |
| Cow position: | chr3:62046612-62046844 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 5, 17 |
| Conread position: | 12-226 |
| Cow position: | chr3:69785677-69785447 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 12-227 |
| Cow position: | chr3:31350156-31349935 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 7, 56 |
| Conread position: | 12-238 |
| Cow position: | chr3:56476630-56476860 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 7, 51 |
| Conread position: | 12-240 |
| Cow position: | chr3:19682643-19682893 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 7, 51 |
| Conread position: | 12-241 |
| Cow position: | chr3:6182271-6182044 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 147, 6 |
| Conread position: | 12-242 |
| Cow position: | chr3:19585812-19586052 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 7, 51 |
| Conread position: | 12-244 |
| Cow position: | chr3:18686855-18687093 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 172, 55 |
| Conread position: | 12-248 |
| Cow position: | chr3:35153565-35153797 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 7, 51 |
| Conread position: | 12-249 |
| Cow position: | chr3:27274479-27274723 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 52 |
| Conread position: | 12-254 |
| Cow position: | chr3:49363057-49363303 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 7, 51 |
| Conread position: | 12-254 |
| Cow position: | chr3:75080711-75080953 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 8, 56 |
| Conread position: | 12-255 |
| Cow position: | chr3:53428967-53428716 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 7, 14 |
| Conread position: | 12-258 |
| Cow position: | chr3:83215210-83215456 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 8, 51 |
| Conread position: | 12-286 |
| Cow position: | chr3:23105414-23105132 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 7, 52 |
| Conread position: | 13-177 |
| Cow position: | chr3:17934989-17934824 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 6, 50 |
| Conread position: | 13-246 |
| Cow position: | chr3:53084039-53083792 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 7, 50 |
| Conread position: | 13-274 |
| Cow position: | chr3:75107724-75107992 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 153, 49 |
| Conread position: | 14-161 |
| Cow position: | chr3:73443138-73442999 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 14-172 |
| Cow position: | chr3:17222192-17222031 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 7, 50 |
| Conread position: | 14-173 |
| Cow position: | chr3:8733403-8733250 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 14-177 |
| Cow position: | chr3:57624414-57624577 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 6, 49 |
| Conread position: | 14-178 |
| Cow position: | chr3:79645485-79645316 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 92, 48 |
| Conread position: | 14-185 |
| Cow position: | chr3:20515868-20515699 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 6, 49 |
| Conread position: | 14-219 |
| Cow position: | chr3:77589469-77589667 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 6, 33 |
| Conread position: | 14-223 |
| Cow position: | chr3:45647630-45647836 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 7, 54 |
| Conread position: | 14-224 |
| Cow position: | chr3:5365627-5365836 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 5, 54 |
| Conread position: | 14-224 |
| Cow position: | chr3:22221278-22221497 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 6, 51 |
| Conread position: | 14-224 |
| Cow position: | chr3:23471509-23471292 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 6, 49 |
| Conread position: | 14-224 |
| Cow position: | chr3:73395068-73395286 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 159, 39 |
| Conread position: | 14-224 |
| Cow position: | chr3:77365339-77365121 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 144, 56 |
| Conread position: | 14-226 |
| Cow position: | chr3:55189804-55189577 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 6, 49 |
| Conread position: | 14-226 |
| Cow position: | chr3:65236974-65237196 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 6, 49 |
| Conread position: | 14-226 |
| Cow position: | chr3:79094090-79093888 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 14-229 |
| Cow position: | chr3:64135668-64135873 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 7, 54 |
| Conread position: | 14-230 |
| Cow position: | chr3:52608132-52608358 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 6, 49 |
| Conread position: | 14-231 |
| Cow position: | chr3:30940753-30940983 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 44, 5 |
| Conread position: | 14-234 |
| Cow position: | chr3:10591565-10591332 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 6, 50 |
| Conread position: | 14-240 |
| Cow position: | chr3:60389715-60389941 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 162, 48 |
| Conread position: | 14-243 |
| Cow position: | chr3:15158982-15159219 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 143, 48 |
| Conread position: | 14-244 |
| Cow position: | chr3:53221963-53222200 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 144, 224 |
| Conread position: | 14-245 |
| Cow position: | chr3:78093439-78093206 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 6, 50 |
| Conread position: | 15-145 |
| Cow position: | chr3:5374284-5374409 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 15-145 |
| Cow position: | chr3:74502373-74502244 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 94, 47 |
| Conread position: | 15-161 |
| Cow position: | chr3:3738435-3738578 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 15-163 |
| Cow position: | chr3:33693772-33693918 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 78, 13 |
| Conread position: | 15-165 |
| Cow position: | chr3:58767215-58767364 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 15-167 |
| Cow position: | chr3:38100093-38100246 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 76, 52 |
| Conread position: | 15-174 |
| Cow position: | chr3:5305750-5305908 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 15-175 |
| Cow position: | chr3:32409164-32409324 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 133, 47 |
| Conread position: | 15-177 |
| Cow position: | chr3:5100820-5100657 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 144, 56 |
| Conread position: | 15-222 |
| Cow position: | chr3:45881850-45882068 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 161, 52 |
| Conread position: | 15-224 |
| Cow position: | chr3:54739932-54739729 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 174, 63 |
| Conread position: | 15-226 |
| Cow position: | chr3:39969911-39969690 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 76, 45 |
| Conread position: | 15-226 |
| Cow position: | chr3:68708056-68707849 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 151, 47 |
| Conread position: | 15-226 |
| Cow position: | chr3:68881164-68880958 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 151, 47 |
| Conread position: | 15-241 |
| Cow position: | chr3:9641518-9641745 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 5, 47 |
| Conread position: | 15-243 |
| Cow position: | chr3:116141-116355 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 108, 44 |
| Conread position: | 15-248 |
| Cow position: | chr3:15228871-15228649 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 15-250 |
| Cow position: | chr3:81234341-81234585 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 156, 45 |
| Conread position: | 15-280 |
| Cow position: | chr3:82019887-82019617 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 168, 53 |
| Conread position: | 16-145 |
| Cow position: | chr3:55109660-55109532 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 16-147 |
| Cow position: | chr3:59799201-59799331 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 16-163 |
| Cow position: | chr3:20333960-20334108 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 131, 47 |
| Conread position: | 16-171 |
| Cow position: | chr3:1785292-1785139 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 16-172 |
| Cow position: | chr3:27940185-27940035 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 16-174 |
| Cow position: | chr3:61467237-61467079 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 134, 46 |
| Conread position: | 16-175 |
| Cow position: | chr3:3316862-3316707 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 16-175 |
| Cow position: | chr3:65413325-65413166 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 128, 54 |
| Conread position: | 16-177 |
| Cow position: | chr3:26603602-26603439 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 16-181 |
| Cow position: | chr3:64010856-64010698 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 16-181 |
| Cow position: | chr3:79196712-79196875 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 16-185 |
| Cow position: | chr3:16505522-16505360 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 16-186 |
| Cow position: | chr3:81471143-81470974 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 16-219 |
| Cow position: | chr3:3985280-3985482 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 138, 46 |
| Conread position: | 16-223 |
| Cow position: | chr3:80564920-80565121 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 141, 17 |
| Conread position: | 16-223 |
| Cow position: | chr3:83455196-83454987 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 143, 25 |
| Conread position: | 16-224 |
| Cow position: | chr3:8061082-8061291 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 141, 46 |
| Conread position: | 16-224 |
| Cow position: | chr3:53150278-53150504 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 16-224 |
| Cow position: | chr3:59474075-59474291 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 141, 46 |
| Conread position: | 16-226 |
| Cow position: | chr3:14552828-14553045 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 144, 46 |
| Conread position: | 16-226 |
| Cow position: | chr3:29360193-29359991 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 16-226 |
| Cow position: | chr3:29887468-29887267 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 46, 87 |
| Conread position: | 16-226 |
| Cow position: | chr3:32585103-32585326 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 153, 46 |
| Conread position: | 16-226 |
| Cow position: | chr3:51349776-51349971 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 16-226 |
| Cow position: | chr3:83491039-83491253 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 167, 55 |
| Conread position: | 16-231 |
| Cow position: | chr3:8349612-8349393 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 46, 70 |
| Conread position: | 16-231 |
| Cow position: | chr3:48363029-48363247 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 169, 47 |
| Conread position: | 16-235 |
| Cow position: | chr3:23408403-23408182 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 157, 51 |
| Conread position: | 16-236 |
| Cow position: | chr3:28908250-28908033 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 16-241 |
| Cow position: | chr3:4548980-4549205 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 173, 45 |
| Conread position: | 16-242 |
| Cow position: | chr3:15950960-15950731 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 169, 46 |
| Conread position: | 16-242 |
| Cow position: | chr3:23132216-23131982 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 185 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 139, 46 |
| Conread position: | 16-243 |
| Cow position: | chr3:30180038-30180275 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 27, 52 |
| Conread position: | 16-247 |
| Cow position: | chr3:23169110-23168876 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 67, 32 |
| Conread position: | 16-248 |
| Cow position: | chr3:64196779-64197022 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 132, 47 |
| Conread position: | 16-251 |
| Cow position: | chr3:55177793-55177557 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 154, 46 |
| Conread position: | 16-253 |
| Cow position: | chr3:22232697-22232467 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 149, 45 |
| Conread position: | 16-254 |
| Cow position: | chr3:38864078-38864317 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 69, 45 |
| Conread position: | 16-256 |
| Cow position: | chr3:22165462-22165218 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 199 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 91, 47 |
| Conread position: | 16-256 |
| Cow position: | chr3:78092558-78092311 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 162, 51 |
| Conread position: | 16-265 |
| Cow position: | chr3:65969120-65969371 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 187, 51 |
| Conread position: | 16-266 |
| Cow position: | chr3:31309401-31309143 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 143, 46 |
| Conread position: | 16-267 |
| Cow position: | chr3:53739232-53738983 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 76, 46 |
| Conread position: | 16-278 |
| Cow position: | chr3:68616370-68616115 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 148, 33 |
| Conread position: | 16-289 |
| Cow position: | chr3:68586976-68587253 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 171, 46 |
| Conread position: | 17-172 |
| Cow position: | chr3:54290559-54290406 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 17-175 |
| Cow position: | chr3:70401851-70402007 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 17-177 |
| Cow position: | chr3:59919986-59920141 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 153, 30 |
| Conread position: | 17-178 |
| Cow position: | chr3:41652330-41652489 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 17-201 |
| Cow position: | chr3:9116981-9117167 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 129, 45 |
| Conread position: | 17-223 |
| Cow position: | chr3:11229411-11229201 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 172, 53 |
| Conread position: | 17-224 |
| Cow position: | chr3:48900378-48900159 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 160, 53 |
| Conread position: | 17-231 |
| Cow position: | chr3:48072928-48072708 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 160, 46 |
| Conread position: | 17-242 |
| Cow position: | chr3:14601757-14601523 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 57, 45 |
| Conread position: | 17-242 |
| Cow position: | chr3:70762165-70761934 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 184 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 144, 11 |
| Conread position: | 17-244 |
| Cow position: | chr3:68156676-68156919 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 62, 43 |
| Conread position: | 17-253 |
| Cow position: | chr3:55712394-55712633 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 171, 45 |
| Conread position: | 17-253 |
| Cow position: | chr3:77582063-77582308 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 127, 48 |
| Conread position: | 17-264 |
| Cow position: | chr3:57704280-57704541 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 37, 78 |
| Conread position: | 18-156 |
| Cow position: | chr3:50593957-50593823 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 18-161 |
| Cow position: | chr3:3478299-3478158 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 110, 40 |
| Conread position: | 18-185 |
| Cow position: | chr3:82123593-82123426 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 19-176 |
| Cow position: | chr3:62789219-62789063 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 20-173 |
| Cow position: | chr3:20677882-20677733 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 22-173 |
| Cow position: | chr3:67930224-67930076 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 124, 40 |
| Conread position: | 22-177 |
| Cow position: | chr3:28258054-28258210 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 124, 40 |
| Conread position: | 22-181 |
| Cow position: | chr3:83988492-83988649 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 22-224 |
| Cow position: | chr3:52456877-52457080 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 153, 40 |
| Conread position: | 22-226 |
| Cow position: | chr3:48459370-48459156 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 40 |
| Conread position: | 22-226 |
| Cow position: | chr3:64280972-64280765 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 153, 115 |
| Conread position: | 22-227 |
| Cow position: | chr3:10372229-10372430 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 23, 41 |
| Conread position: | 22-237 |
| Cow position: | chr3:76268016-76267789 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 154, 45 |
| Conread position: | 22-243 |
| Cow position: | chr3:59299533-59299763 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 81, 40 |
| Conread position: | 23-177 |
| Cow position: | chr3:53704003-53703851 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 23-177 |
| Cow position: | chr3:64373196-64373043 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 69, 37 |
| Conread position: | 23-224 |
| Cow position: | chr3:41863584-41863793 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 23, 45 |
| Conread position: | 23-226 |
| Cow position: | chr3:14194217-14194017 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 61, 39 |
| Conread position: | 23-226 |
| Cow position: | chr3:48252845-48253052 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 133, 39 |
| Conread position: | 23-242 |
| Cow position: | chr3:10732850-10733065 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 24, 41 |
| Conread position: | 23-243 |
| Cow position: | chr3:26065959-26066177 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 62, 40 |
| Conread position: | 24-176 |
| Cow position: | chr3:70565776-70565625 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 124, 6 |
| Conread position: | 24-221 |
| Cow position: | chr3:54946092-54946289 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 153, 39 |
| Conread position: | 24-244 |
| Cow position: | chr3:44961043-44960826 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 159, 20 |
| Conread position: | 25-162 |
| Cow position: | chr3:68004740-68004604 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 25-233 |
| Cow position: | chr3:2067856-2068069 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 123, 38 |
| Conread position: | 26-168 |
| Cow position: | chr3:80053578-80053440 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 26-177 |
| Cow position: | chr3:10104004-10104153 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 132, 41 |
| Conread position: | 26-179 |
| Cow position: | chr3:9588680-9588524 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 122, 37 |
| Conread position: | 26-221 |
| Cow position: | chr3:51234131-51233936 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 131, 53 |
| Conread position: | 26-224 |
| Cow position: | chr3:59933334-59933551 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 118, 36 |
| Conread position: | 26-224 |
| Cow position: | chr3:73467594-73467797 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 101, 36 |
| Conread position: | 26-254 |
| Cow position: | chr3:57764185-57764412 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 151, 36 |
| Conread position: | 27-176 |
| Cow position: | chr3:75238421-75238569 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 27-226 |
| Cow position: | chr3:4461520-4461317 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 114, 35 |
| Conread position: | 27-231 |
| Cow position: | chr3:3883851-3883642 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 124, 35 |
| Conread position: | 28-185 |
| Cow position: | chr3:68627722-68627563 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 120, 34 |
| Conread position: | 28-224 |
| Cow position: | chr3:17058581-17058376 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 34, 18 |
| Conread position: | 28-245 |
| Cow position: | chr3:15160485-15160705 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 159, 43 |
| Conread position: | 29-248 |
| Cow position: | chr3:22924409-22924185 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 156, 38 |
| Conread position: | 30-243 |
| Cow position: | chr3:24596456-24596242 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 144, 32 |
| Conread position: | 31-163 |
| Cow position: | chr3:24371890-24372020 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 31-231 |
| Cow position: | chr3:76269860-76270066 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 154, 32 |
| Conread position: | 31-243 |
| Cow position: | chr3:74234154-74234371 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 77, 31 |
| Conread position: | 32-185 |
| Cow position: | chr3:35238982-35239135 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 121, 30 |
| Conread position: | 32-224 |
| Cow position: | chr3:26970782-26970982 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 128, 30 |
| Conread position: | 32-224 |
| Cow position: | chr3:52845520-52845726 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 32-225 |
| Cow position: | chr3:20021238-20021440 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 133, 30 |
| Conread position: | 33-226 |
| Cow position: | chr3:32610234-32610417 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 33-242 |
| Cow position: | chr3:8523180-8522965 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 143, 26 |
| Conread position: | 35-241 |
| Cow position: | chr3:67407394-67407179 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 123, 27 |
| Conread position: | 36-226 |
| Cow position: | chr3:59597151-59597346 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 134, 26 |
| Conread position: | 37-152 |
| Cow position: | chr3:16601416-16601530 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 39-226 |
| Cow position: | chr3:19788854-19788667 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 130, 23 |
| Conread position: | 40-231 |
| Cow position: | chr3:36418503-36418309 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 145, 23 |
| Conread position: | 41-226 |
| Cow position: | chr3:27246981-27246794 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 116, 21 |
| Conread position: | 41-255 |
| Cow position: | chr3:31115292-31115076 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 130, 26 |
| Conread position: | 41-267 |
| Cow position: | chr3:75966803-75966570 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 88, 26 |
| Conread position: | 42-177 |
| Cow position: | chr3:76415924-76415791 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 42-231 |
| Cow position: | chr3:73701483-73701676 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 50, 17 |
| Conread position: | 44-224 |
| Cow position: | chr3:8526383-8526208 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 64, 26 |
| Conread position: | 44-231 |
| Cow position: | chr3:50350988-50350800 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 44-243 |
| Cow position: | chr3:35074859-35075059 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 143, 18 |
| Conread position: | 48-179 |
| Cow position: | chr3:28556177-28556046 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 118, 14 |
| Conread position: | 49-241 |
| Cow position: | chr3:22868734-22868528 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 50-171 |
| Cow position: | chr3:81547090-81547209 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 100, 12 |
| Conread position: | 50-173 |
| Cow position: | chr3:20175033-20175157 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 50-256 |
| Cow position: | chr3:59317689-59317904 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 100, 12 |
| Conread position: | 51-248 |
| Cow position: | chr3:31352888-31352689 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 124, 150 |
| Conread position: | 52-246 |
| Cow position: | chr3:41510565-41510771 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 57, 10 |
| Conread position: | 53-245 |
| Cow position: | chr3:23818481-23818679 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 134, 9 |
| Conread position: | 54-224 |
| Cow position: | chr3:4518193-4518013 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 54-226 |
| Cow position: | chr3:19709101-19709278 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 94, 8 |
| Conread position: | 55-224 |
| Cow position: | chr3:3818776-3818935 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 55-226 |
| Cow position: | chr3:26393310-26393126 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 55-231 |
| Cow position: | chr3:56943936-56943752 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 7, 152 |
| Conread position: | 56-177 |
| Cow position: | chr3:53256520-53256640 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 56-233 |
| Cow position: | chr3:78945849-78945666 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 54, 6 |
| Conread position: | 59-247 |
| Cow position: | chr3:19611358-19611159 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 61-177 |
| Cow position: | chr3:27670410-27670525 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 109, 95 |
| Conread position: | 61-226 |
| Cow position: | chr3:51402898-51403069 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 113, 89 |
| Conread position: | 61-257 |
| Cow position: | chr3:48783346-48783527 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 141, 82 |
| Conread position: | 63-185 |
| Cow position: | chr3:17531739-17531612 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 67-177 |
| Cow position: | chr3:20719307-20719197 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 67-226 |
| Cow position: | chr3:43896057-43895890 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 67-246 |
| Cow position: | chr3:26977537-26977729 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 148 |
| Conread position: | 68-261 |
| Cow position: | chr3:74050698-74050498 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 106, 88 |
| Conread position: | 69-254 |
| Cow position: | chr3:24774658-24774843 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 105, 65 |
| Conread position: | 69-280 |
| Cow position: | chr3:21959664-21959878 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 72-224 |
| Cow position: | chr3:77653935-77654091 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 75-254 |
| Cow position: | chr3:68624228-68624420 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 78-248 |
| Cow position: | chr3:57641814-57641998 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 19, 8 |
| Conread position: | 78-248 |
| Cow position: | chr3:66885016-66884836 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 72, 166 |
| Conread position: | 90-226 |
| Cow position: | chr3:59635338-59635476 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 91-224 |
| Cow position: | chr3:22903726-22903587 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 91-245 |
| Cow position: | chr3:2636976-2637137 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 97-242 |
| Cow position: | chr3:24370434-24370579 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 137 |
Show alignments to all cow chromosomes.