• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8023L17.3
        

               
Conread position:
               
3-499
               

               
Cow position:
               
chr17:5280371-5280870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
155, 8
               

               
Conread position:
               
5-521
               

               
Cow position:
               
chr17:11036197-11035669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
27, 158
               

               
Conread position:
               
6-521
               

               
Cow position:
               
chr17:20234475-20233974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
350, 30
               

               
Conread position:
               
8-246
               

               
Cow position:
               
chr17:24895353-24895115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
10-500
               

               
Cow position:
               
chr17:15664955-15664440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 123
               

               
Conread position:
               
11-409
               

               
Cow position:
               
chr17:26233550-26233960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
5, 142
               

               
Conread position:
               
11-431
               

               
Cow position:
               
chr17:28468402-28467979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 51
               

               
Conread position:
               
12-348
               

               
Cow position:
               
chr17:12510705-12511047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 81
               

               
Conread position:
               
12-494
               

               
Cow position:
               
chr17:13922758-13922250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
12-499
               

               
Cow position:
               
chr17:12289138-12289643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
146, 33
               

               
Conread position:
               
14-372
               

               
Cow position:
               
chr17:36864894-36864535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
30, 40
               

               
Conread position:
               
14-459
               

               
Cow position:
               
chr17:25612359-25611908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 44
               

               
Conread position:
               
14-486
               

               
Cow position:
               
chr17:11381452-11381935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 139
               

               
Conread position:
               
14-499
               

               
Cow position:
               
chr17:21972855-21973359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 44
               

               
Conread position:
               
14-499
               

               
Cow position:
               
chr17:23063996-23063483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
14-499
               

               
Cow position:
               
chr17:27795927-27795420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 46
               

               
Conread position:
               
14-499
               

               
Cow position:
               
chr17:32027175-32027690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 44
               

               
Conread position:
               
14-591
               

               
Cow position:
               
chr17:17682640-17683215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
23, 107
               

               
Conread position:
               
15-499
               

               
Cow position:
               
chr17:6156304-6155813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
109, 41
               

               
Conread position:
               
16-299
               

               
Cow position:
               
chr17:25126613-25126342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
17-395
               

               
Cow position:
               
chr17:6318601-6318976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 28
               

               
Conread position:
               
17-501
               

               
Cow position:
               
chr17:20032637-20033146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
25, 43
               

               
Conread position:
               
18-205
               

               
Cow position:
               
chr17:27606782-27606600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
18-235
               

               
Cow position:
               
chr17:22081256-22081463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
18-451
               

               
Cow position:
               
chr17:24149459-24149000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 132
               

               
Conread position:
               
18-456
               

               
Cow position:
               
chr17:3577792-3577356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 33
               

               
Conread position:
               
18-498
               

               
Cow position:
               
chr17:15684771-15684278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
210, 40
               

               
Conread position:
               
18-498
               

               
Cow position:
               
chr17:17951498-17951016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
139, 38
               

               
Conread position:
               
18-499
               

               
Cow position:
               
chr17:30529279-30529764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 28
               

               
Conread position:
               
18-499
               

               
Cow position:
               
chr17:40772096-40771600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
258, 33
               

               
Conread position:
               
18-499
               

               
Cow position:
               
chr17:43717065-43717536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 128
               

               
Conread position:
               
19-499
               

               
Cow position:
               
chr17:17059689-17059212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
19-499
               

               
Cow position:
               
chr17:21959417-21959907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
20-308
               

               
Cow position:
               
chr17:29995167-29995457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
21-499
               

               
Cow position:
               
chr17:18720188-18720676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
158, 25
               

               
Conread position:
               
21-516
               

               
Cow position:
               
chr17:38615226-38614709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 24
               

               
Conread position:
               
22-342
               

               
Cow position:
               
chr17:21039819-21039510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
300, 24
               

               
Conread position:
               
22-375
               

               
Cow position:
               
chr17:11912235-11912596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
22-409
               

               
Cow position:
               
chr17:31581737-31581350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
37, 155
               

               
Conread position:
               
22-493
               

               
Cow position:
               
chr17:32418856-32419340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 21
               

               
Conread position:
               
23-252
               

               
Cow position:
               
chr17:21718732-21718961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 117
               

               
Conread position:
               
23-307
               

               
Cow position:
               
chr17:3153304-3153589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
90, 170
               

               
Conread position:
               
23-409
               

               
Cow position:
               
chr17:40673637-40673252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
101, 124
               

               
Conread position:
               
23-489
               

               
Cow position:
               
chr17:33793412-33792964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 21
               

               
Conread position:
               
23-497
               

               
Cow position:
               
chr17:6936418-6936890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 28
               

               
Conread position:
               
23-498
               

               
Cow position:
               
chr17:10528470-10528968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
254, 28
               

               
Conread position:
               
23-499
               

               
Cow position:
               
chr17:4601297-4601771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
25, 45
               

               
Conread position:
               
24-315
               

               
Cow position:
               
chr17:7959444-7959153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
24-321
               

               
Cow position:
               
chr17:8815444-8815159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
249, 20
               

               
Conread position:
               
24-422
               

               
Cow position:
               
chr17:25118150-25117742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
107, 141
               

               
Conread position:
               
24-434
               

               
Cow position:
               
chr17:26631540-26631976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
25, 147
               

               
Conread position:
               
24-465
               

               
Cow position:
               
chr17:26000380-25999925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
90, 28
               

               
Conread position:
               
24-487
               

               
Cow position:
               
chr17:12325507-12325962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
365, 88
               

               
Conread position:
               
24-489
               

               
Cow position:
               
chr17:21738605-21739102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
113, 18
               

               
Conread position:
               
24-495
               

               
Cow position:
               
chr17:37163281-37163751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
24-497
               

               
Cow position:
               
chr17:36791385-36790922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
263, 28
               

               
Conread position:
               
24-499
               

               
Cow position:
               
chr17:22775629-22775161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
144, 19
               

               
Conread position:
               
24-499
               

               
Cow position:
               
chr17:32138153-32138628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 19
               

               
Conread position:
               
25-320
               

               
Cow position:
               
chr17:33154895-33155185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 94
               

               
Conread position:
               
25-466
               

               
Cow position:
               
chr17:20071839-20072267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
25-498
               

               
Cow position:
               
chr17:18490794-18490306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
253, 33
               

               
Conread position:
               
25-499
               

               
Cow position:
               
chr17:5731181-5730696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 138
               

               
Conread position:
               
25-499
               

               
Cow position:
               
chr17:20801072-20800588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
121, 16
               

               
Conread position:
               
26-390
               

               
Cow position:
               
chr17:25616502-25616145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
51, 17
               

               
Conread position:
               
26-492
               

               
Cow position:
               
chr17:42419965-42419512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
150, 32
               

               
Conread position:
               
26-492
               

               
Cow position:
               
chr17:44923940-44924396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
26-498
               

               
Cow position:
               
chr17:5422817-5423298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 73
               

               
Conread position:
               
26-498
               

               
Cow position:
               
chr17:15102632-15103115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 18
               

               
Conread position:
               
26-499
               

               
Cow position:
               
chr17:11618849-11618352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 25
               

               
Conread position:
               
27-222
               

               
Cow position:
               
chr17:19543972-19544167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
114, 93
               

               
Conread position:
               
27-319
               

               
Cow position:
               
chr17:34790809-34791095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
192, 17
               

               
Conread position:
               
27-320
               

               
Cow position:
               
chr17:25800624-25800912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
122, 80
               

               
Conread position:
               
27-460
               

               
Cow position:
               
chr17:36454518-36454950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
72, 112
               

               
Conread position:
               
27-466
               

               
Cow position:
               
chr17:1256239-1256696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
71, 31
               

               
Conread position:
               
27-492
               

               
Cow position:
               
chr17:26231222-26230719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
110, 26
               

               
Conread position:
               
27-493
               

               
Cow position:
               
chr17:25875654-25875191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
92, 31
               

               
Conread position:
               
27-494
               

               
Cow position:
               
chr17:29472716-29472252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
153, 29
               

               
Conread position:
               
27-497
               

               
Cow position:
               
chr17:18202018-18201548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
121, 16
               

               
Conread position:
               
27-499
               

               
Cow position:
               
chr17:26818215-26818680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 18
               

               
Conread position:
               
28-276
               

               
Cow position:
               
chr17:17035203-17034961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
28-306
               

               
Cow position:
               
chr17:12959358-12959088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
58, 23
               

               
Conread position:
               
28-307
               

               
Cow position:
               
chr17:32332837-32333110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
114, 15
               

               
Conread position:
               
28-458
               

               
Cow position:
               
chr17:20932588-20932144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
28-497
               

               
Cow position:
               
chr17:20889623-20889149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
269, 92
               

               
Conread position:
               
28-498
               

               
Cow position:
               
chr17:16371514-16371025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 18
               

               
Conread position:
               
29-217
               

               
Cow position:
               
chr17:8663761-8663575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
104, 14
               

               
Conread position:
               
29-239
               

               
Cow position:
               
chr17:39964135-39963926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
114, 30
               

               
Conread position:
               
29-448
               

               
Cow position:
               
chr17:3468008-3467595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 29
               

               
Conread position:
               
29-460
               

               
Cow position:
               
chr17:24824502-24824066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 14
               

               
Conread position:
               
29-495
               

               
Cow position:
               
chr17:24077643-24077180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
257, 14
               

               
Conread position:
               
29-497
               

               
Cow position:
               
chr17:24587880-24587392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 29
               

               
Conread position:
               
30-294
               

               
Cow position:
               
chr17:21466003-21466269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
97, 13
               

               
Conread position:
               
30-355
               

               
Cow position:
               
chr17:9824919-9824590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
232, 13
               

               
Conread position:
               
30-497
               

               
Cow position:
               
chr17:32993369-32993839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
31-387
               

               
Cow position:
               
chr17:36178796-36179132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
127, 21
               

               
Conread position:
               
31-486
               

               
Cow position:
               
chr17:40332033-40331554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
31-499
               

               
Cow position:
               
chr17:29084420-29083979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 12
               

               
Conread position:
               
32-379
               

               
Cow position:
               
chr17:21325598-21325230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
82, 26
               

               
Conread position:
               
32-498
               

               
Cow position:
               
chr17:16446169-16446656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
27, 250
               

               
Conread position:
               
32-520
               

               
Cow position:
               
chr17:6424012-6423511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
33-307
               

               
Cow position:
               
chr17:25473029-25473298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
33-495
               

               
Cow position:
               
chr17:31480779-31481266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
98, 10
               

               
Conread position:
               
34-499
               

               
Cow position:
               
chr17:11664323-11664816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
34-499
               

               
Cow position:
               
chr17:24974196-24973722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 92
               

               
Conread position:
               
35-438
               

               
Cow position:
               
chr17:4105741-4106150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 23
               

               
Conread position:
               
35-438
               

               
Cow position:
               
chr17:4121476-4121886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 23
               

               
Conread position:
               
35-499
               

               
Cow position:
               
chr17:14025659-14026143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
116, 10
               

               
Conread position:
               
35-499
               

               
Cow position:
               
chr17:21292786-21293273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
102, 44
               

               
Conread position:
               
35-513
               

               
Cow position:
               
chr17:3202160-3202634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
89, 23
               

               
Conread position:
               
36-307
               

               
Cow position:
               
chr17:1025584-1025838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
159, 23
               

               
Conread position:
               
36-497
               

               
Cow position:
               
chr17:36275588-36275131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
36-499
               

               
Cow position:
               
chr17:20090378-20090849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 246
               

               
Conread position:
               
37-310
               

               
Cow position:
               
chr17:9932061-9932324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
237, 77
               

               
Conread position:
               
37-446
               

               
Cow position:
               
chr17:1634247-1634654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 9
               

               
Conread position:
               
37-460
               

               
Cow position:
               
chr17:12447154-12447584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
49, 16
               

               
Conread position:
               
37-489
               

               
Cow position:
               
chr17:30713596-30713135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 22
               

               
Conread position:
               
37-494
               

               
Cow position:
               
chr17:20157858-20157394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 108
               

               
Conread position:
               
37-497
               

               
Cow position:
               
chr17:32989724-32989267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 40
               

               
Conread position:
               
37-498
               

               
Cow position:
               
chr17:9854232-9853759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
81, 172
               

               
Conread position:
               
37-498
               

               
Cow position:
               
chr17:17222593-17222117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
106, 21
               

               
Conread position:
               
37-498
               

               
Cow position:
               
chr17:27274818-27274335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
37-499
               

               
Cow position:
               
chr17:25608268-25608734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
106, 21
               

               
Conread position:
               
37-499
               

               
Cow position:
               
chr17:25815845-25815380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
202, 94
               

               
Conread position:
               
37-499
               

               
Cow position:
               
chr17:29292140-29292597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
231, 83
               

               
Conread position:
               
37-510
               

               
Cow position:
               
chr17:11277777-11278263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
76, 29
               

               
Conread position:
               
37-520
               

               
Cow position:
               
chr17:7810496-7810991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 263
               

               
Conread position:
               
38-457
               

               
Cow position:
               
chr17:1035346-1035784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
113, 18
               

               
Conread position:
               
38-497
               

               
Cow position:
               
chr17:24883321-24883790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 320
               

               
Conread position:
               
43-362
               

               
Cow position:
               
chr17:25342496-25342826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
136, 125
               

               
Conread position:
               
43-436
               

               
Cow position:
               
chr17:1562547-1562936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
252, 77
               

               
Conread position:
               
43-449
               

               
Cow position:
               
chr17:10458690-10459111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
191, 57
               

               
Conread position:
               
43-499
               

               
Cow position:
               
chr17:13243810-13244254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
185, 23
               

               
Conread position:
               
45-260
               

               
Cow position:
               
chr17:946598-946385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
45-307
               

               
Cow position:
               
chr17:22051349-22051610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
216, 98
               

               
Conread position:
               
45-436
               

               
Cow position:
               
chr17:7143098-7142702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
261, 13
               

               
Conread position:
               
46-245
               

               
Cow position:
               
chr17:21677131-21676933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
46-282
               

               
Cow position:
               
chr17:43315050-43315280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
131, 12
               

               
Conread position:
               
46-285
               

               
Cow position:
               
chr17:42150628-42150394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
46-306
               

               
Cow position:
               
chr17:25511483-25511225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
215, 86
               

               
Conread position:
               
46-317
               

               
Cow position:
               
chr17:37340790-37341070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
137, 92
               

               
Conread position:
               
46-320
               

               
Cow position:
               
chr17:40412820-40412556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
46-415
               

               
Cow position:
               
chr17:30728747-30728381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
46-460
               

               
Cow position:
               
chr17:908980-908560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 97
               

               
Conread position:
               
46-487
               

               
Cow position:
               
chr17:33933508-33933953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 12
               

               
Conread position:
               
46-488
               

               
Cow position:
               
chr17:8836711-8837158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
233, 12
               

               
Conread position:
               
46-489
               

               
Cow position:
               
chr17:24004614-24004177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
46-489
               

               
Cow position:
               
chr17:25128113-25128567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 85
               

               
Conread position:
               
46-490
               

               
Cow position:
               
chr17:11280851-11281326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
85, 12
               

               
Conread position:
               
46-497
               

               
Cow position:
               
chr17:3389075-3388635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
68, 172
               

               
Conread position:
               
46-497
               

               
Cow position:
               
chr17:34948877-34948414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
46-498
               

               
Cow position:
               
chr17:11215652-11216110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 110
               

               
Conread position:
               
46-498
               

               
Cow position:
               
chr17:20022273-20022744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 82
               

               
Conread position:
               
46-499
               

               
Cow position:
               
chr17:5898284-5898752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
105, 12
               

               
Conread position:
               
46-499
               

               
Cow position:
               
chr17:21003591-21004059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 12
               

               
Conread position:
               
47-284
               

               
Cow position:
               
chr17:26637616-26637857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
109, 98
               

               
Conread position:
               
47-307
               

               
Cow position:
               
chr17:18934496-18934239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
132, 27
               

               
Conread position:
               
47-403
               

               
Cow position:
               
chr17:27183702-27184069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
92, 47
               

               
Conread position:
               
48-499
               

               
Cow position:
               
chr17:40312938-40312497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
306, 62
               

               
Conread position:
               
52-243
               

               
Cow position:
               
chr17:15728702-15728518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
52-320
               

               
Cow position:
               
chr17:5372298-5372559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
231, 6
               

               
Conread position:
               
52-320
               

               
Cow position:
               
chr17:40639181-40638920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 6
               

               
Conread position:
               
52-462
               

               
Cow position:
               
chr17:1063403-1063001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 31
               

               
Conread position:
               
52-473
               

               
Cow position:
               
chr17:29356009-29356422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
186, 6
               

               
Conread position:
               
52-478
               

               
Cow position:
               
chr17:27429790-27429371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
235, 6
               

               
Conread position:
               
52-483
               

               
Cow position:
               
chr17:40741888-40741435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
83, 6
               

               
Conread position:
               
52-497
               

               
Cow position:
               
chr17:24786791-24787247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 7
               

               
Conread position:
               
52-499
               

               
Cow position:
               
chr17:5000367-5000802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 6
               

               
Conread position:
               
52-499
               

               
Cow position:
               
chr17:20992804-20993268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 6
               

               
Conread position:
               
52-499
               

               
Cow position:
               
chr17:29714980-29715414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 6
               

               
Conread position:
               
52-503
               

               
Cow position:
               
chr17:25901442-25900966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 6
               

               
Conread position:
               
56-468
               

               
Cow position:
               
chr17:10447144-10446722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
82, 108
               

               
Conread position:
               
57-408
               

               
Cow position:
               
chr17:32280898-32280531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
102, 108
               

               
Conread position:
               
57-424
               

               
Cow position:
               
chr17:24559523-24559149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
89, 63
               

               
Conread position:
               
57-429
               

               
Cow position:
               
chr17:31037147-31037535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 9
               

               
Conread position:
               
57-480
               

               
Cow position:
               
chr17:32278674-32279116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
102, 108
               

               
Conread position:
               
57-488
               

               
Cow position:
               
chr17:33053084-33052646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
91, 35
               

               
Conread position:
               
57-497
               

               
Cow position:
               
chr17:11397897-11397444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
65, 107
               

               
Conread position:
               
57-497
               

               
Cow position:
               
chr17:21114725-21115174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 86
               

               
Conread position:
               
57-498
               

               
Cow position:
               
chr17:26514945-26514488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
159, 84
               

               
Conread position:
               
57-499
               

               
Cow position:
               
chr17:14033411-14033875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
54, 80
               

               
Conread position:
               
58-308
               

               
Cow position:
               
chr17:26574993-26575250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
135, 219
               

               
Conread position:
               
58-317
               

               
Cow position:
               
chr17:24163263-24163008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
221, 44
               

               
Conread position:
               
58-394
               

               
Cow position:
               
chr17:4299713-4300038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
137, 85
               

               
Conread position:
               
58-441
               

               
Cow position:
               
chr17:12306171-12306563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
116, 62
               

               
Conread position:
               
58-466
               

               
Cow position:
               
chr17:5514986-5514567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
251, 65
               

               
Conread position:
               
58-499
               

               
Cow position:
               
chr17:33288429-33288882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 77
               

               
Conread position:
               
59-234
               

               
Cow position:
               
chr17:24767060-24767234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 85
               

               
Conread position:
               
59-426
               

               
Cow position:
               
chr17:31701663-31701285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 89
               

               
Conread position:
               
59-465
               

               
Cow position:
               
chr17:24773904-24773492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
162, 67
               

               
Conread position:
               
59-481
               

               
Cow position:
               
chr17:11362404-11361973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
78, 105
               

               
Conread position:
               
59-485
               

               
Cow position:
               
chr17:32471560-32472005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 55
               

               
Conread position:
               
60-458
               

               
Cow position:
               
chr17:12536247-12536652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 60
               

               
Conread position:
               
60-497
               

               
Cow position:
               
chr17:36330740-36331192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 60
               

               
Conread position:
               
60-499
               

               
Cow position:
               
chr17:23100995-23101439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 50
               

               
Conread position:
               
61-499
               

               
Cow position:
               
chr17:39771628-39771168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
73, 104
               

               
Conread position:
               
62-521
               

               
Cow position:
               
chr17:20848749-20848281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
67, 110
               

               
Conread position:
               
65-501
               

               
Cow position:
               
chr17:25189513-25189050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
8, 103
               

               
Conread position:
               
67-391
               

               
Cow position:
               
chr17:40852188-40851868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
72-494
               

               
Cow position:
               
chr17:18473378-18472956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 54
               

               
Conread position:
               
72-499
               

               
Cow position:
               
chr17:19999332-19998907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
86, 8
               

               
Conread position:
               
75-498
               

               
Cow position:
               
chr17:34078896-34079325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 195
               

               
Conread position:
               
84-487
               

               
Cow position:
               
chr17:25097656-25097247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
170, 59
               

               
Conread position:
               
84-499
               

               
Cow position:
               
chr17:30665475-30665046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 47
               

               
Conread position:
               
84-520
               

               
Cow position:
               
chr17:7698257-7697806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
47, 120
               

               
Conread position:
               
84-521
               

               
Cow position:
               
chr17:14004021-14003576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
96, 36
               

               
Conread position:
               
85-306
               

               
Cow position:
               
chr17:39606627-39606411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
197, 49
               

               
Conread position:
               
85-331
               

               
Cow position:
               
chr17:40276943-40276695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
199, 246
               

               
Conread position:
               
85-491
               

               
Cow position:
               
chr17:5768101-5767694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 35
               

               
Conread position:
               
85-499
               

               
Cow position:
               
chr17:28284830-28285254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 57
               

               
Conread position:
               
87-400
               

               
Cow position:
               
chr17:45296608-45296308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
87-500
               

               
Cow position:
               
chr17:18108886-18109315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 69
               

               
Conread position:
               
88-484
               

               
Cow position:
               
chr17:4225306-4225704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 11
               

               
Conread position:
               
92-493
               

               
Cow position:
               
chr17:18495324-18495731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
192, 117
               

               
Conread position:
               
92-499
               

               
Cow position:
               
chr17:1492951-1493384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
67, 79
               

               
Conread position:
               
100-376
               

               
Cow position:
               
chr17:35573936-35573663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
211, 27
               

               
Conread position:
               
106-454
               

               
Cow position:
               
chr17:29157596-29157238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 33
               

               
Conread position:
               
107-466
               

               
Cow position:
               
chr17:24822041-24821678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
7, 37
               

               
Conread position:
               
113-435
               

               
Cow position:
               
chr17:31585592-31585265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
101, 35
               

               
Conread position:
               
114-499
               

               
Cow position:
               
chr17:23246372-23245983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
160, 90
               

               
Conread position:
               
114-520
               

               
Cow position:
               
chr17:9746685-9746271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
115-362
               

               
Cow position:
               
chr17:23516772-23517028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
185, 20
               

               
Conread position:
               
116-499
               

               
Cow position:
               
chr17:25796167-25796568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
42, 19
               

               
Conread position:
               
121-322
               

               
Cow position:
               
chr17:22016922-22017119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
161, 48
               

               
Conread position:
               
123-499
               

               
Cow position:
               
chr17:1060882-1061290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
135-439
               

               
Cow position:
               
chr17:979014-979318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
95, 84
               

               
Conread position:
               
135-507
               

               
Cow position:
               
chr17:9117797-9117408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 175
               

               
Conread position:
               
138-311
               

               
Cow position:
               
chr17:11478919-11478743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
138-385
               

               
Cow position:
               
chr17:21757991-21758245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
171, 133
               

               
Conread position:
               
138-489
               

               
Cow position:
               
chr17:2662574-2662191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
165, 141
               

               
Conread position:
               
138-494
               

               
Cow position:
               
chr17:22806393-22806757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
122, 105
               

               
Conread position:
               
138-495
               

               
Cow position:
               
chr17:3683521-3683881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
116, 17
               

               
Conread position:
               
139-480
               

               
Cow position:
               
chr17:25032334-25032681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
89, 9
               

               
Conread position:
               
141-381
               

               
Cow position:
               
chr17:35338774-35339020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
157, 125
               

               
Conread position:
               
141-393
               

               
Cow position:
               
chr17:1040891-1040629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
161, 16
               

               
Conread position:
               
141-409
               

               
Cow position:
               
chr17:265816-265544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
134, 31
               

               
Conread position:
               
141-460
               

               
Cow position:
               
chr17:9911904-9911577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
148, 68
               

               
Conread position:
               
141-488
               

               
Cow position:
               
chr17:17406282-17405921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
141-498
               

               
Cow position:
               
chr17:26765170-26764787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 136
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr17:39736321-39735958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
129, 85
               

               
Conread position:
               
142-494
               

               
Cow position:
               
chr17:30718272-30718642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
142-499
               

               
Cow position:
               
chr17:5900515-5900158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
146, 174
               

               
Conread position:
               
142-499
               

               
Cow position:
               
chr17:38833189-38832814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
77, 89
               

               
Conread position:
               
143-499
               

               
Cow position:
               
chr17:20126740-20126393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
147, 5
               

               
Conread position:
               
145-308
               

               
Cow position:
               
chr17:18848015-18848180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 30
               

               
Conread position:
               
145-508
               

               
Cow position:
               
chr17:15340609-15340965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
81, 237
               

               
Conread position:
               
148-322
               

               
Cow position:
               
chr17:11368710-11368883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
133, 40
               

               
Conread position:
               
148-449
               

               
Cow position:
               
chr17:12591314-12590988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
148-451
               

               
Cow position:
               
chr17:32273547-32273861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
103, 270
               

               
Conread position:
               
148-466
               

               
Cow position:
               
chr17:4213883-4213564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
63, 122
               

               
Conread position:
               
148-472
               

               
Cow position:
               
chr17:5006348-5006692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
15, 63
               

               
Conread position:
               
148-488
               

               
Cow position:
               
chr17:11156354-11156710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
83, 56
               

               
Conread position:
               
148-495
               

               
Cow position:
               
chr17:21495511-21495153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 80
               

               
Conread position:
               
148-496
               

               
Cow position:
               
chr17:27048295-27047938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
155, 53
               

               
Conread position:
               
148-498
               

               
Cow position:
               
chr17:8079452-8079090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
127, 161
               

               
Conread position:
               
148-499
               

               
Cow position:
               
chr17:22032555-22032911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
45, 86
               

               
Conread position:
               
148-499
               

               
Cow position:
               
chr17:27142885-27142528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
68, 83
               

               
Conread position:
               
148-499
               

               
Cow position:
               
chr17:41030078-41029724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
107, 61
               

               
Conread position:
               
149-498
               

               
Cow position:
               
chr17:3503720-3503353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
85, 76
               

               
Conread position:
               
149-506
               

               
Cow position:
               
chr17:1410099-1410475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 370
               

               
Conread position:
               
150-447
               

               
Cow position:
               
chr17:20990052-20990367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
64, 95
               

               
Conread position:
               
150-488
               

               
Cow position:
               
chr17:24554134-24553787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 173
               

               
Conread position:
               
153-387
               

               
Cow position:
               
chr17:23563660-23563900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
63, 156
               

               
Conread position:
               
154-466
               

               
Cow position:
               
chr17:41891927-41892261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
115, 212
               

               
Conread position:
               
155-495
               

               
Cow position:
               
chr17:40421804-40421445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
156-510
               

               
Cow position:
               
chr17:21243658-21244021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 53
               

               
Conread position:
               
156-516
               

               
Cow position:
               
chr17:18592574-18592195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 365
               

               
Conread position:
               
158-480
               

               
Cow position:
               
chr17:38647191-38646859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 241
               

               
Conread position:
               
161-430
               

               
Cow position:
               
chr17:4968239-4967954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
137, 115
               

               
Conread position:
               
161-484
               

               
Cow position:
               
chr17:3782170-3781831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
125, 48
               

               
Conread position:
               
161-498
               

               
Cow position:
               
chr17:19891751-19891388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
95, 114
               

               
Conread position:
               
172-442
               

               
Cow position:
               
chr17:21917757-21918042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
173-494
               

               
Cow position:
               
chr17:8544421-8544087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
60, 302
               

               
Conread position:
               
173-495
               

               
Cow position:
               
chr17:28540143-28539812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
125, 37
               

               
Conread position:
               
173-497
               

               
Cow position:
               
chr17:11172500-11172844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
118, 176
               

               
Conread position:
               
173-497
               

               
Cow position:
               
chr17:28359956-28359627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
94, 10
               

               
Conread position:
               
174-308
               

               
Cow position:
               
chr17:21793739-21793872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
112, 61
               

               
Conread position:
               
174-493
               

               
Cow position:
               
chr17:9748856-9748548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
91, 9
               

               
Conread position:
               
174-499
               

               
Cow position:
               
chr17:17060568-17060913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
77, 138
               

               
Conread position:
               
175-498
               

               
Cow position:
               
chr17:35126824-35126487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 250
               

               
Conread position:
               
177-482
               

               
Cow position:
               
chr17:31231012-31231325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
124, 26
               

               
Conread position:
               
177-483
               

               
Cow position:
               
chr17:1275634-1275307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
98, 32
               

               
Conread position:
               
177-497
               

               
Cow position:
               
chr17:25541706-25542038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
98, 137
               

               
Conread position:
               
178-500
               

               
Cow position:
               
chr17:923989-923651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
125, 165
               

               
Conread position:
               
180-510
               

               
Cow position:
               
chr17:18860613-18860959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
121, 204
               

               
Conread position:
               
181-499
               

               
Cow position:
               
chr17:20081692-20082007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
154, 7
               

               
Conread position:
               
181-499
               

               
Cow position:
               
chr17:43141602-43141948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr17:32366391-32366058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
195-489
               

               
Cow position:
               
chr17:20870005-20870311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
83, 175
               

               
Conread position:
               
196-431
               

               
Cow position:
               
chr17:27549736-27549985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
93, 23
               

               
Conread position:
               
196-493
               

               
Cow position:
               
chr17:2034621-2034323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
196-499
               

               
Cow position:
               
chr17:14848450-14848750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
77, 34
               

               
Conread position:
               
208-494
               

               
Cow position:
               
chr17:9753855-9753568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 134
               

               
Conread position:
               
211-498
               

               
Cow position:
               
chr17:15333633-15333937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
211-504
               

               
Cow position:
               
chr17:5733391-5733680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
101, 62
               

               
Conread position:
               
211-589
               

               
Cow position:
               
chr17:1783528-1783928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
95, 9
               

               
Conread position:
               
215-491
               

               
Cow position:
               
chr17:20835654-20835373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
176, 53
               

               
Conread position:
               
215-500
               

               
Cow position:
               
chr17:3306931-3306639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 48
               

               
Conread position:
               
216-496
               

               
Cow position:
               
chr17:5694879-5695169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
63, 142
               

               
Conread position:
               
218-481
               

               
Cow position:
               
chr17:33290740-33291019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
56, 142
               

               
Conread position:
               
219-440
               

               
Cow position:
               
chr17:10510588-10510828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
223-466
               

               
Cow position:
               
chr17:21207076-21207327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
47, 90
               

               
Conread position:
               
229-454
               

               
Cow position:
               
chr17:34207756-34208000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
230-489
               

               
Cow position:
               
chr17:21323334-21323082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
230-513
               

               
Cow position:
               
chr17:18173759-18174045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
232-424
               

               
Cow position:
               
chr17:42259239-42259050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
84, 36
               

               
Conread position:
               
241-472
               

               
Cow position:
               
chr17:26224558-26224317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
242-528
               

               
Cow position:
               
chr17:12216037-12216337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 291
               

               
Conread position:
               
248-497
               

               
Cow position:
               
chr17:3387313-3387068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
107, 36
               

               
Conread position:
               
264-453
               

               
Cow position:
               
chr17:3442648-3442847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
267-499
               

               
Cow position:
               
chr17:21363427-21363180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
269-494
               

               
Cow position:
               
chr17:11305051-11304813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
271-498
               

               
Cow position:
               
chr17:22232255-22232493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
272-495
               

               
Cow position:
               
chr17:15133165-15132942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
39, 7
               

               
Conread position:
               
274-459
               

               
Cow position:
               
chr17:18929084-18929261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
63, 38
               

               
Conread position:
               
280-489
               

               
Cow position:
               
chr17:27505117-27504908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
109, 32
               

               
Conread position:
               
281-499
               

               
Cow position:
               
chr17:6996266-6996051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 31
               

               
Conread position:
               
291-495
               

               
Cow position:
               
chr17:24128956-24128746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
292-510
               

               
Cow position:
               
chr17:13409360-13409595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
297-497
               

               
Cow position:
               
chr17:1358821-1359023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
87, 150
               

               
Conread position:
               
300-466
               

               
Cow position:
               
chr17:35311403-35311229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
300-484
               

               
Cow position:
               
chr17:35371848-35372029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
160, 35
               

               
Conread position:
               
300-499
               

               
Cow position:
               
chr17:24550153-24549942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
301-499
               

               
Cow position:
               
chr17:9950928-9950731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
150, 44
               

               
Conread position:
               
302-499
               

               
Cow position:
               
chr17:20093159-20093352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
82, 49
               

               
Conread position:
               
303-460
               

               
Cow position:
               
chr17:24490501-24490335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
303-466
               

               
Cow position:
               
chr17:4436259-4436423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
93, 63
               

               
Conread position:
               
303-468
               

               
Cow position:
               
chr17:21697710-21697536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
303-472
               

               
Cow position:
               
chr17:12059121-12059291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
159, 79
               

               
Conread position:
               
303-474
               

               
Cow position:
               
chr17:21412272-21412449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 47
               

               
Conread position:
               
303-474
               

               
Cow position:
               
chr17:21434754-21434931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 47
               

               
Conread position:
               
303-476
               

               
Cow position:
               
chr17:21628453-21628277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 80
               

               
Conread position:
               
303-477
               

               
Cow position:
               
chr17:6624232-6624052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
303-481
               

               
Cow position:
               
chr17:966765-966949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
303-481
               

               
Cow position:
               
chr17:27765243-27765071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
158, 61
               

               
Conread position:
               
303-486
               

               
Cow position:
               
chr17:24580323-24580514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
303-486
               

               
Cow position:
               
chr17:25078028-25078208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 110
               

               
Conread position:
               
303-487
               

               
Cow position:
               
chr17:18884363-18884563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
303-488
               

               
Cow position:
               
chr17:3182611-3182801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
303-488
               

               
Cow position:
               
chr17:5895937-5896127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
303-488
               

               
Cow position:
               
chr17:13143717-13143907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
303-490
               

               
Cow position:
               
chr17:29040492-29040685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 39
               

               
Conread position:
               
303-493
               

               
Cow position:
               
chr17:11296613-11296413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
303-495
               

               
Cow position:
               
chr17:3843453-3843263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
67, 38
               

               
Conread position:
               
303-495
               

               
Cow position:
               
chr17:7040972-7041169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
46, 27
               

               
Conread position:
               
303-497
               

               
Cow position:
               
chr17:5224374-5224177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
58, 96
               

               
Conread position:
               
303-497
               

               
Cow position:
               
chr17:6566439-6566247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
303-497
               

               
Cow position:
               
chr17:8690468-8690666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
52, 110
               

               
Conread position:
               
303-497
               

               
Cow position:
               
chr17:9778221-9778025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
52, 96
               

               
Conread position:
               
303-497
               

               
Cow position:
               
chr17:21312837-21313027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
303-497
               

               
Cow position:
               
chr17:32554051-32554249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
86, 31
               

               
Conread position:
               
303-497
               

               
Cow position:
               
chr17:38200787-38200992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr17:3042447-3042252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
27, 89
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr17:3471394-3471194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
52, 110
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr17:3498690-3498891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
50, 76
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr17:4824469-4824274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
85, 115
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr17:7132477-7132682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr17:11056397-11056602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr17:1295596-1295799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr17:4721464-4721259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
47, 26
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr17:6391952-6391756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 70
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr17:9567815-9568015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr17:11171766-11171568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
90, 26
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr17:15985323-15985128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
85, 141
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr17:21017770-21017566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
86, 44
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr17:21335721-21335926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr17:21620692-21620486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr17:21680738-21680540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
86, 34
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr17:27667215-27667422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr17:27679263-27679472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr17:35185016-35184806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr17:40893122-40892923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
47, 77
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr17:42347252-42347449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
159, 40
               

               
Conread position:
               
303-500
               

               
Cow position:
               
chr17:20839587-20839787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
51, 146
               

               
Conread position:
               
303-500
               

               
Cow position:
               
chr17:32651593-32651387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
303-500
               

               
Cow position:
               
chr17:36504054-36504256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
303-502
               

               
Cow position:
               
chr17:21755456-21755670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
52, 198
               

               
Conread position:
               
303-510
               

               
Cow position:
               
chr17:27306132-27305922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
53, 174
               

               
Conread position:
               
303-521
               

               
Cow position:
               
chr17:21874333-21874569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
43, 123
               

               
Conread position:
               
303-523
               

               
Cow position:
               
chr17:20780484-20780257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
95, 79
               

               
Conread position:
               
304-456
               

               
Cow position:
               
chr17:36203517-36203672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
45, 77
               

               
Conread position:
               
304-466
               

               
Cow position:
               
chr17:37480019-37480185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
304-468
               

               
Cow position:
               
chr17:3518280-3518448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 97
               

               
Conread position:
               
304-483
               

               
Cow position:
               
chr17:21710478-21710293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 57
               

               
Conread position:
               
304-485
               

               
Cow position:
               
chr17:1327998-1328184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 25
               

               
Conread position:
               
304-485
               

               
Cow position:
               
chr17:19755927-19756114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
304-489
               

               
Cow position:
               
chr17:10220448-10220263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
25, 57
               

               
Conread position:
               
304-490
               

               
Cow position:
               
chr17:21419409-21419213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
304-494
               

               
Cow position:
               
chr17:8926243-8926443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
304-495
               

               
Cow position:
               
chr17:11837395-11837198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
304-495
               

               
Cow position:
               
chr17:15363589-15363781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 169
               

               
Conread position:
               
304-495
               

               
Cow position:
               
chr17:22781664-22781468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
48, 163
               

               
Conread position:
               
304-497
               

               
Cow position:
               
chr17:242610-242410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
43, 186
               

               
Conread position:
               
304-497
               

               
Cow position:
               
chr17:1020589-1020793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
304-497
               

               
Cow position:
               
chr17:2079733-2079535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
72, 181
               

               
Conread position:
               
304-497
               

               
Cow position:
               
chr17:5745275-5745469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
51, 76
               

               
Conread position:
               
304-497
               

               
Cow position:
               
chr17:12219964-12220164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
304-497
               

               
Cow position:
               
chr17:25168291-25168087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
304-497
               

               
Cow position:
               
chr17:26183195-26182996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
50, 82
               

               
Conread position:
               
304-497
               

               
Cow position:
               
chr17:36817914-36817716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
304-498
               

               
Cow position:
               
chr17:1526382-1526580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
304-498
               

               
Cow position:
               
chr17:16895332-16895521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
84, 25
               

               
Conread position:
               
304-498
               

               
Cow position:
               
chr17:17410263-17410071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 56
               

               
Conread position:
               
304-498
               

               
Cow position:
               
chr17:18494543-18494742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 124
               

               
Conread position:
               
304-498
               

               
Cow position:
               
chr17:26085007-26084808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
304-498
               

               
Cow position:
               
chr17:27819275-27819075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 41
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr17:5041709-5041904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
85, 35
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr17:5255399-5255604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr17:5380943-5380738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 136
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr17:11386488-11386288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr17:15299902-15300098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
158, 57
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr17:20083541-20083740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
46, 70
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr17:24877115-24876910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr17:33999076-33999272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
85, 26
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr17:34595913-34595716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 28
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr17:39012698-39012490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
304-510
               

               
Cow position:
               
chr17:8279736-8279945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
25, 192
               

               
Conread position:
               
304-510
               

               
Cow position:
               
chr17:30204629-30204414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
304-515
               

               
Cow position:
               
chr17:1568200-1568418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
50, 206
               

               
Conread position:
               
304-520
               

               
Cow position:
               
chr17:9697726-9697951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
85, 140
               

               
Conread position:
               
304-520
               

               
Cow position:
               
chr17:16307351-16307129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
305-487
               

               
Cow position:
               
chr17:18246049-18245859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
305-495
               

               
Cow position:
               
chr17:7760494-7760687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
98, 37
               

               
Conread position:
               
305-497
               

               
Cow position:
               
chr17:38276659-38276466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
24, 89
               

               
Conread position:
               
305-498
               

               
Cow position:
               
chr17:10649817-10649622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
52, 93
               

               
Conread position:
               
305-499
               

               
Cow position:
               
chr17:20129638-20129450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
51, 66
               

               
Conread position:
               
305-499
               

               
Cow position:
               
chr17:21031754-21031560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
46, 91
               

               
Conread position:
               
305-499
               

               
Cow position:
               
chr17:23337045-23337242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
156, 51
               

               
Conread position:
               
305-510
               

               
Cow position:
               
chr17:4606930-4606731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
305-510
               

               
Cow position:
               
chr17:30539281-30539490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
157, 62
               

               
Conread position:
               
306-466
               

               
Cow position:
               
chr17:7648183-7648028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 67
               

               
Conread position:
               
306-492
               

               
Cow position:
               
chr17:22564152-22563966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
43, 106
               

               
Conread position:
               
306-494
               

               
Cow position:
               
chr17:11101830-11102017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
156, 71
               

               
Conread position:
               
309-488
               

               
Cow position:
               
chr17:33926157-33926338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
80, 58
               

               
Conread position:
               
309-493
               

               
Cow position:
               
chr17:25590267-25590458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
309-494
               

               
Cow position:
               
chr17:41290053-41290240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
80, 108
               

               
Conread position:
               
309-497
               

               
Cow position:
               
chr17:14088355-14088553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
309-497
               

               
Cow position:
               
chr17:17452635-17452828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 138
               

               
Conread position:
               
309-497
               

               
Cow position:
               
chr17:24761260-24761449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
309-498
               

               
Cow position:
               
chr17:7559701-7559898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
309-499
               

               
Cow position:
               
chr17:9565277-9565081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
309-510
               

               
Cow position:
               
chr17:29363407-29363602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
310-499
               

               
Cow position:
               
chr17:17179993-17179812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
311-495
               

               
Cow position:
               
chr17:30999740-30999552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
7, 75
               

               
Conread position:
               
311-496
               

               
Cow position:
               
chr17:3258457-3258272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
312-466
               

               
Cow position:
               
chr17:37482108-37482271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
312-492
               

               
Cow position:
               
chr17:31263333-31263523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
312-498
               

               
Cow position:
               
chr17:34316742-34316935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
79, 38
               

               
Conread position:
               
312-499
               

               
Cow position:
               
chr17:43527942-43527753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
44, 151
               

               
Conread position:
               
312-500
               

               
Cow position:
               
chr17:26771392-26771583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
42, 53
               

               
Conread position:
               
313-449
               

               
Cow position:
               
chr17:36268357-36268221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
43, 65
               

               
Conread position:
               
313-495
               

               
Cow position:
               
chr17:4612111-4612301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
314-497
               

               
Cow position:
               
chr17:23680947-23680758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
316-499
               

               
Cow position:
               
chr17:12054682-12054492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
316-499
               

               
Cow position:
               
chr17:16117462-16117657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
316-499
               

               
Cow position:
               
chr17:25755748-25755556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
317-499
               

               
Cow position:
               
chr17:36533616-36533433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
144, 78
               

               
Conread position:
               
318-479
               

               
Cow position:
               
chr17:20912851-20912690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
33, 69
               

               
Conread position:
               
318-488
               

               
Cow position:
               
chr17:4472853-4473020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
143, 46
               

               
Conread position:
               
318-489
               

               
Cow position:
               
chr17:5246856-5246682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
35, 157
               

               
Conread position:
               
318-489
               

               
Cow position:
               
chr17:14265595-14265777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
318-497
               

               
Cow position:
               
chr17:3578199-3578017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
143, 21
               

               
Conread position:
               
318-499
               

               
Cow position:
               
chr17:16869318-16869505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
37, 63
               

               
Conread position:
               
318-499
               

               
Cow position:
               
chr17:20358834-20358650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
37, 112
               

               
Conread position:
               
318-499
               

               
Cow position:
               
chr17:27162613-27162424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
318-518
               

               
Cow position:
               
chr17:3095787-3095575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
322-498
               

               
Cow position:
               
chr17:21039233-21039051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
75, 127
               

               
Conread position:
               
323-492
               

               
Cow position:
               
chr17:12759682-12759861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
323-501
               

               
Cow position:
               
chr17:43826292-43826467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
144, 70
               

               
Conread position:
               
325-499
               

               
Cow position:
               
chr17:21870785-21870966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
327-497
               

               
Cow position:
               
chr17:8644989-8644811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
61, 109
               

               
Conread position:
               
332-498
               

               
Cow position:
               
chr17:7423495-7423668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
333-499
               

               
Cow position:
               
chr17:20269545-20269384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
56, 130
               

               
Conread position:
               
334-498
               

               
Cow position:
               
chr17:39485741-39485580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 118
               

               
Conread position:
               
334-499
               

               
Cow position:
               
chr17:11839643-11839473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
55, 71
               

               
Conread position:
               
335-477
               

               
Cow position:
               
chr17:15067686-15067829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
54, 15
               

               
Conread position:
               
335-495
               

               
Cow position:
               
chr17:20337732-20337571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
18, 131
               

               
Conread position:
               
335-499
               

               
Cow position:
               
chr17:15354924-15354758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
339-499
               

               
Cow position:
               
chr17:144242-144402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
339-499
               

               
Cow position:
               
chr17:1026217-1026051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
50, 27
               

               
Conread position:
               
341-498
               

               
Cow position:
               
chr17:40406243-40406077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
341-499
               

               
Cow position:
               
chr17:13124796-13124961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 148
               

               
Conread position:
               
341-499
               

               
Cow position:
               
chr17:40802738-40802584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
121, 35
               

               
Conread position:
               
345-499
               

               
Cow position:
               
chr17:22057242-22057401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
346-503
               

               
Cow position:
               
chr17:22081970-22082123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
350-497
               

               
Cow position:
               
chr17:24818177-24818027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
350-498
               

               
Cow position:
               
chr17:8067007-8067159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
350-498
               

               
Cow position:
               
chr17:27770036-27770184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
111, 30
               

               
Conread position:
               
351-499
               

               
Cow position:
               
chr17:3153843-3154000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
352-496
               

               
Cow position:
               
chr17:25141380-25141241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
352-500
               

               
Cow position:
               
chr17:11374767-11374918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 78
               

               
Conread position:
               
354-473
               

               
Cow position:
               
chr17:10432277-10432397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
108, 43
               

               
Conread position:
               
354-495
               

               
Cow position:
               
chr17:23517246-23517391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
354-499
               

               
Cow position:
               
chr17:36746403-36746546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
354-509
               

               
Cow position:
               
chr17:15376244-15376084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
355-499
               

               
Cow position:
               
chr17:20874239-20874093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
356-495
               

               
Cow position:
               
chr17:10770000-10769858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
363-495
               

               
Cow position:
               
chr17:2275183-2275050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
105, 17
               

               
Conread position:
               
365-497
               

               
Cow position:
               
chr17:11912789-11912926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
365-499
               

               
Cow position:
               
chr17:21806894-21807033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 7
               

               
Conread position:
               
369-499
               

               
Cow position:
               
chr17:17982875-17983001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
15, 62
               

               
Conread position:
               
372-497
               

               
Cow position:
               
chr17:11832237-11832362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
380-500
               

               
Cow position:
               
chr17:6997985-6997861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 24
               

               
Conread position:
               
382-499
               

               
Cow position:
               
chr17:2729905-2730026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
382-499
               

               
Cow position:
               
chr17:17267039-17267160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
386-489
               

               
Cow position:
               
chr17:32977087-32977192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
387-491
               

               
Cow position:
               
chr17:26802974-26803081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               
Show alignments to all cow chromosomes.