• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8023L17.3
        

               
Conread position:
               
1-472
               

               
Cow position:
               
chr23:8698669-8698203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 42
               

               
Conread position:
               
7-495
               

               
Cow position:
               
chr23:34314708-34315229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 167
               

               
Conread position:
               
9-499
               

               
Cow position:
               
chr23:2317023-2316539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
24, 113
               

               
Conread position:
               
10-305
               

               
Cow position:
               
chr23:3293927-3293637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
260, 49
               

               
Conread position:
               
10-495
               

               
Cow position:
               
chr23:8293743-8293238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
110, 7
               

               
Conread position:
               
11-258
               

               
Cow position:
               
chr23:5395239-5395484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
5, 109
               

               
Conread position:
               
11-453
               

               
Cow position:
               
chr23:2501619-2502067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
11-495
               

               
Cow position:
               
chr23:26986035-26986537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 47
               

               
Conread position:
               
12-498
               

               
Cow position:
               
chr23:5869951-5870449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 140
               

               
Conread position:
               
13-499
               

               
Cow position:
               
chr23:343945-344445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 38
               

               
Conread position:
               
14-498
               

               
Cow position:
               
chr23:8063760-8063287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 29
               

               
Conread position:
               
14-499
               

               
Cow position:
               
chr23:31601215-31601725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 102
               

               
Conread position:
               
14-501
               

               
Cow position:
               
chr23:39778633-39778144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 63
               

               
Conread position:
               
15-308
               

               
Cow position:
               
chr23:24966227-24966522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
15-500
               

               
Cow position:
               
chr23:28206832-28206343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
79, 43
               

               
Conread position:
               
17-509
               

               
Cow position:
               
chr23:33711997-33711494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
31, 48
               

               
Conread position:
               
18-307
               

               
Cow position:
               
chr23:17486589-17486883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
18-307
               

               
Cow position:
               
chr23:20539609-20539326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
13, 29
               

               
Conread position:
               
18-489
               

               
Cow position:
               
chr23:4968296-4968776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
24, 68
               

               
Conread position:
               
18-489
               

               
Cow position:
               
chr23:15286920-15287391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 102
               

               
Conread position:
               
18-497
               

               
Cow position:
               
chr23:26794684-26795169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
137, 25
               

               
Conread position:
               
18-499
               

               
Cow position:
               
chr23:2179433-2179914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
106, 40
               

               
Conread position:
               
20-307
               

               
Cow position:
               
chr23:11212731-11212449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
253, 32
               

               
Conread position:
               
20-497
               

               
Cow position:
               
chr23:21788544-21789036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
146, 20
               

               
Conread position:
               
22-246
               

               
Cow position:
               
chr23:7155477-7155689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
22-310
               

               
Cow position:
               
chr23:1656124-1655835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
19, 121
               

               
Conread position:
               
22-375
               

               
Cow position:
               
chr23:12363396-12363756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 21
               

               
Conread position:
               
22-431
               

               
Cow position:
               
chr23:5426661-5426231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 23
               

               
Conread position:
               
22-449
               

               
Cow position:
               
chr23:18901841-18902265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 24
               

               
Conread position:
               
22-507
               

               
Cow position:
               
chr23:8006467-8005966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
23-495
               

               
Cow position:
               
chr23:16246960-16246481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
23-499
               

               
Cow position:
               
chr23:15181376-15180886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
31, 37
               

               
Conread position:
               
24-294
               

               
Cow position:
               
chr23:40348420-40348690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 101
               

               
Conread position:
               
24-299
               

               
Cow position:
               
chr23:1614433-1614707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
123, 34
               

               
Conread position:
               
25-224
               

               
Cow position:
               
chr23:1429611-1429800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
25-244
               

               
Cow position:
               
chr23:9131740-9131955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
25-254
               

               
Cow position:
               
chr23:27849212-27848992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
25-297
               

               
Cow position:
               
chr23:18384942-18384675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
89, 33
               

               
Conread position:
               
25-440
               

               
Cow position:
               
chr23:4646728-4646308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
253, 20
               

               
Conread position:
               
25-499
               

               
Cow position:
               
chr23:39049220-39049679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
432, 18
               

               
Conread position:
               
26-499
               

               
Cow position:
               
chr23:534445-533963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 18
               

               
Conread position:
               
27-305
               

               
Cow position:
               
chr23:40995381-40995117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
254, 17
               

               
Conread position:
               
27-477
               

               
Cow position:
               
chr23:26848674-26849146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
97, 16
               

               
Conread position:
               
27-488
               

               
Cow position:
               
chr23:6244379-6244843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 92
               

               
Conread position:
               
27-497
               

               
Cow position:
               
chr23:18802045-18802538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
27-499
               

               
Cow position:
               
chr23:13520666-13520191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
28-307
               

               
Cow position:
               
chr23:24927046-24926755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 31
               

               
Conread position:
               
28-341
               

               
Cow position:
               
chr23:35965370-35965052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
125, 286
               

               
Conread position:
               
28-397
               

               
Cow position:
               
chr23:34611274-34611630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
28-496
               

               
Cow position:
               
chr23:7392079-7392547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
96, 28
               

               
Conread position:
               
28-498
               

               
Cow position:
               
chr23:29243154-29242678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
16, 91
               

               
Conread position:
               
28-498
               

               
Cow position:
               
chr23:34416788-34416306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
36, 30
               

               
Conread position:
               
29-224
               

               
Cow position:
               
chr23:23104268-23104461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 100
               

               
Conread position:
               
29-499
               

               
Cow position:
               
chr23:187399-186904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 116
               

               
Conread position:
               
30-457
               

               
Cow position:
               
chr23:16689846-16690284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
94, 109
               

               
Conread position:
               
30-466
               

               
Cow position:
               
chr23:29521693-29521237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
83, 117
               

               
Conread position:
               
30-499
               

               
Cow position:
               
chr23:20744364-20744856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 21
               

               
Conread position:
               
31-487
               

               
Cow position:
               
chr23:3967337-3967802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
31-489
               

               
Cow position:
               
chr23:1337089-1337562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
22, 28
               

               
Conread position:
               
31-499
               

               
Cow position:
               
chr23:40502294-40502772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
144, 267
               

               
Conread position:
               
31-499
               

               
Cow position:
               
chr23:40778481-40777996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
32-498
               

               
Cow position:
               
chr23:5162660-5162162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
17, 120
               

               
Conread position:
               
32-510
               

               
Cow position:
               
chr23:9874877-9874397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
93, 143
               

               
Conread position:
               
33-217
               

               
Cow position:
               
chr23:33702178-33702362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
104, 10
               

               
Conread position:
               
33-499
               

               
Cow position:
               
chr23:26841634-26841182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 11
               

               
Conread position:
               
33-499
               

               
Cow position:
               
chr23:29626644-29626147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 136
               

               
Conread position:
               
35-261
               

               
Cow position:
               
chr23:22668299-22668516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
35-481
               

               
Cow position:
               
chr23:22530221-22530666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
17, 213
               

               
Conread position:
               
36-415
               

               
Cow position:
               
chr23:3281897-3282295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
36-494
               

               
Cow position:
               
chr23:5617790-5617317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 136
               

               
Conread position:
               
36-499
               

               
Cow position:
               
chr23:1290520-1290033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 237
               

               
Conread position:
               
36-500
               

               
Cow position:
               
chr23:1883605-1883125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 22
               

               
Conread position:
               
37-267
               

               
Cow position:
               
chr23:22238609-22238839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
16, 9
               

               
Conread position:
               
37-387
               

               
Cow position:
               
chr23:38243-37887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
37-456
               

               
Cow position:
               
chr23:24704495-24704058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
238, 42
               

               
Conread position:
               
37-498
               

               
Cow position:
               
chr23:1877683-1878137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 106
               

               
Conread position:
               
37-524
               

               
Cow position:
               
chr23:39302906-39302424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
201, 125
               

               
Conread position:
               
38-261
               

               
Cow position:
               
chr23:1194286-1194503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
38-306
               

               
Cow position:
               
chr23:40275346-40275600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
233, 40
               

               
Conread position:
               
38-320
               

               
Cow position:
               
chr23:16961497-16961227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
243, 83
               

               
Conread position:
               
38-492
               

               
Cow position:
               
chr23:25864483-25864942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
11, 21
               

               
Conread position:
               
39-486
               

               
Cow position:
               
chr23:4810949-4810496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
62, 68
               

               
Conread position:
               
39-491
               

               
Cow position:
               
chr23:14164166-14164659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
82, 73
               

               
Conread position:
               
39-499
               

               
Cow position:
               
chr23:22297820-22298283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
74, 178
               

               
Conread position:
               
41-449
               

               
Cow position:
               
chr23:2457639-2457248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
345, 62
               

               
Conread position:
               
43-435
               

               
Cow position:
               
chr23:40444062-40443665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
234, 102
               

               
Conread position:
               
45-466
               

               
Cow position:
               
chr23:5603092-5603502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 76
               

               
Conread position:
               
45-510
               

               
Cow position:
               
chr23:6224171-6223728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
219, 13
               

               
Conread position:
               
46-261
               

               
Cow position:
               
chr23:17597625-17597415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
46-261
               

               
Cow position:
               
chr23:40500894-40501109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 86
               

               
Conread position:
               
46-269
               

               
Cow position:
               
chr23:39267988-39267765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
7, 13
               

               
Conread position:
               
46-287
               

               
Cow position:
               
chr23:25990236-25990475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
46-306
               

               
Cow position:
               
chr23:1222038-1222295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
235, 43
               

               
Conread position:
               
46-307
               

               
Cow position:
               
chr23:40391677-40391418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
229, 12
               

               
Conread position:
               
46-320
               

               
Cow position:
               
chr23:33629124-33628857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
231, 12
               

               
Conread position:
               
46-342
               

               
Cow position:
               
chr23:24685442-24685147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
242, 12
               

               
Conread position:
               
46-361
               

               
Cow position:
               
chr23:385105-385423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
68, 143
               

               
Conread position:
               
46-367
               

               
Cow position:
               
chr23:18286385-18286068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
237, 13
               

               
Conread position:
               
46-463
               

               
Cow position:
               
chr23:5451524-5451097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 13
               

               
Conread position:
               
46-466
               

               
Cow position:
               
chr23:15743293-15742868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
73, 12
               

               
Conread position:
               
46-473
               

               
Cow position:
               
chr23:1884970-1885417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
7, 13
               

               
Conread position:
               
46-486
               

               
Cow position:
               
chr23:2281985-2282428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 36
               

               
Conread position:
               
46-495
               

               
Cow position:
               
chr23:10853250-10852789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
98, 42
               

               
Conread position:
               
46-499
               

               
Cow position:
               
chr23:4578830-4579304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
46-499
               

               
Cow position:
               
chr23:24509886-24509436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 12
               

               
Conread position:
               
46-499
               

               
Cow position:
               
chr23:37066059-37065570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
46-499
               

               
Cow position:
               
chr23:38454961-38455452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
46-499
               

               
Cow position:
               
chr23:39753304-39752847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
255, 15
               

               
Conread position:
               
46-509
               

               
Cow position:
               
chr23:29345574-29346036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
7, 13
               

               
Conread position:
               
47-243
               

               
Cow position:
               
chr23:24718601-24718795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
47-300
               

               
Cow position:
               
chr23:18823186-18822940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
47-496
               

               
Cow position:
               
chr23:16582704-16583173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
11, 125
               

               
Conread position:
               
48-489
               

               
Cow position:
               
chr23:6172485-6172919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
251, 36
               

               
Conread position:
               
50-495
               

               
Cow position:
               
chr23:20194731-20195181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
166, 77
               

               
Conread position:
               
51-491
               

               
Cow position:
               
chr23:41472822-41472354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
71, 7
               

               
Conread position:
               
52-307
               

               
Cow position:
               
chr23:1981477-1981711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
52-322
               

               
Cow position:
               
chr23:40637460-40637185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 6
               

               
Conread position:
               
52-428
               

               
Cow position:
               
chr23:29021864-29021484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
84, 74
               

               
Conread position:
               
52-496
               

               
Cow position:
               
chr23:26949387-26948926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
220, 6
               

               
Conread position:
               
52-497
               

               
Cow position:
               
chr23:16880974-16881422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 6
               

               
Conread position:
               
52-498
               

               
Cow position:
               
chr23:22396260-22396707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
216, 6
               

               
Conread position:
               
52-499
               

               
Cow position:
               
chr23:4995900-4996352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
110, 6
               

               
Conread position:
               
52-499
               

               
Cow position:
               
chr23:9734616-9734152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
61, 6
               

               
Conread position:
               
55-499
               

               
Cow position:
               
chr23:7845482-7845019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 23
               

               
Conread position:
               
56-495
               

               
Cow position:
               
chr23:26779481-26779923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
93, 106
               

               
Conread position:
               
57-487
               

               
Cow position:
               
chr23:11314825-11315272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 231
               

               
Conread position:
               
57-495
               

               
Cow position:
               
chr23:11129428-11128971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
58-293
               

               
Cow position:
               
chr23:20093053-20093286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
224, 97
               

               
Conread position:
               
58-362
               

               
Cow position:
               
chr23:5795667-5795353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
217, 85
               

               
Conread position:
               
58-465
               

               
Cow position:
               
chr23:10416237-10416653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
57, 86
               

               
Conread position:
               
58-496
               

               
Cow position:
               
chr23:22804913-22804458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
245, 12
               

               
Conread position:
               
58-496
               

               
Cow position:
               
chr23:31494058-31493613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 26
               

               
Conread position:
               
58-503
               

               
Cow position:
               
chr23:1536511-1536057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
81, 102
               

               
Conread position:
               
59-280
               

               
Cow position:
               
chr23:22587068-22586850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
59-331
               

               
Cow position:
               
chr23:2160452-2160716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
214, 47
               

               
Conread position:
               
61-431
               

               
Cow position:
               
chr23:1585211-1585585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
161, 70
               

               
Conread position:
               
61-499
               

               
Cow position:
               
chr23:4972953-4972519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
53, 17
               

               
Conread position:
               
61-499
               

               
Cow position:
               
chr23:29470953-29471382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
67-307
               

               
Cow position:
               
chr23:5881339-5881575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
207, 60
               

               
Conread position:
               
67-494
               

               
Cow position:
               
chr23:21452550-21452995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 62
               

               
Conread position:
               
67-509
               

               
Cow position:
               
chr23:9599670-9599221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
72-510
               

               
Cow position:
               
chr23:7175790-7175343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
74-495
               

               
Cow position:
               
chr23:3394325-3394752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
151, 45
               

               
Conread position:
               
75-454
               

               
Cow position:
               
chr23:12290443-12290063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 89
               

               
Conread position:
               
76-354
               

               
Cow position:
               
chr23:26825235-26824975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
83-497
               

               
Cow position:
               
chr23:39775891-39775466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
46, 61
               

               
Conread position:
               
86-514
               

               
Cow position:
               
chr23:19758470-19758902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
188, 50
               

               
Conread position:
               
96-498
               

               
Cow position:
               
chr23:5540298-5539916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
137, 33
               

               
Conread position:
               
98-447
               

               
Cow position:
               
chr23:21765067-21764705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
135, 35
               

               
Conread position:
               
104-442
               

               
Cow position:
               
chr23:1776496-1776838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
31, 72
               

               
Conread position:
               
109-500
               

               
Cow position:
               
chr23:9268720-9268322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 100
               

               
Conread position:
               
113-485
               

               
Cow position:
               
chr23:29034451-29034060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 13
               

               
Conread position:
               
114-469
               

               
Cow position:
               
chr23:33717405-33717779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 97
               

               
Conread position:
               
114-501
               

               
Cow position:
               
chr23:1701024-1700650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
169, 21
               

               
Conread position:
               
121-423
               

               
Cow position:
               
chr23:2487864-2488173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
123, 17
               

               
Conread position:
               
121-458
               

               
Cow position:
               
chr23:5707122-5706777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 169
               

               
Conread position:
               
127-497
               

               
Cow position:
               
chr23:1640909-1640546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
262, 16
               

               
Conread position:
               
137-466
               

               
Cow position:
               
chr23:27544939-27544601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
147, 11
               

               
Conread position:
               
138-494
               

               
Cow position:
               
chr23:20388539-20388898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
169, 140
               

               
Conread position:
               
138-497
               

               
Cow position:
               
chr23:17404950-17404587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
171, 36
               

               
Conread position:
               
138-499
               

               
Cow position:
               
chr23:14838633-14839002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
138, 264
               

               
Conread position:
               
139-386
               

               
Cow position:
               
chr23:7361220-7360968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
139-510
               

               
Cow position:
               
chr23:36309531-36309149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
40, 30
               

               
Conread position:
               
140-510
               

               
Cow position:
               
chr23:35368937-35369290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
322, 21
               

               
Conread position:
               
141-307
               

               
Cow position:
               
chr23:348839-349007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
141-307
               

               
Cow position:
               
chr23:1876820-1876654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
141-366
               

               
Cow position:
               
chr23:4908609-4908383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
141-496
               

               
Cow position:
               
chr23:11473396-11473773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
57, 20
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr23:30662530-30662891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
171, 72
               

               
Conread position:
               
142-491
               

               
Cow position:
               
chr23:17092390-17092747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
14, 20
               

               
Conread position:
               
142-498
               

               
Cow position:
               
chr23:11045594-11045220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 69
               

               
Conread position:
               
142-498
               

               
Cow position:
               
chr23:40525876-40526234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 20
               

               
Conread position:
               
142-499
               

               
Cow position:
               
chr23:1923729-1924100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 117
               

               
Conread position:
               
143-491
               

               
Cow position:
               
chr23:1254793-1254418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 5
               

               
Conread position:
               
145-498
               

               
Cow position:
               
chr23:25668987-25669336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
145-510
               

               
Cow position:
               
chr23:3262393-3262776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
134, 75
               

               
Conread position:
               
146-501
               

               
Cow position:
               
chr23:1397935-1398301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
28, 24
               

               
Conread position:
               
147-497
               

               
Cow position:
               
chr23:39806972-39806607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 62
               

               
Conread position:
               
148-320
               

               
Cow position:
               
chr23:4470398-4470570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
135, 66
               

               
Conread position:
               
148-362
               

               
Cow position:
               
chr23:16076063-16076284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 24
               

               
Conread position:
               
148-446
               

               
Cow position:
               
chr23:22399507-22399190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
124, 72
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chr23:16699940-16700284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
127, 142
               

               
Conread position:
               
148-480
               

               
Cow position:
               
chr23:18402188-18402534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
155, 136
               

               
Conread position:
               
148-489
               

               
Cow position:
               
chr23:1720881-1721244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
130, 92
               

               
Conread position:
               
148-497
               

               
Cow position:
               
chr23:1690875-1690523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
105, 57
               

               
Conread position:
               
148-497
               

               
Cow position:
               
chr23:2799682-2799303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
161, 362
               

               
Conread position:
               
148-497
               

               
Cow position:
               
chr23:6592606-6592958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
103, 72
               

               
Conread position:
               
148-499
               

               
Cow position:
               
chr23:11845377-11845020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
130, 26
               

               
Conread position:
               
148-499
               

               
Cow position:
               
chr23:13511827-13511466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
57, 124
               

               
Conread position:
               
148-559
               

               
Cow position:
               
chr23:13555338-13555754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
163, 42
               

               
Conread position:
               
149-496
               

               
Cow position:
               
chr23:29458998-29459352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 188
               

               
Conread position:
               
152-466
               

               
Cow position:
               
chr23:25378744-25378425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
135, 57
               

               
Conread position:
               
154-500
               

               
Cow position:
               
chr23:18322332-18322687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
116, 7
               

               
Conread position:
               
160-494
               

               
Cow position:
               
chr23:4980457-4980805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 38
               

               
Conread position:
               
161-426
               

               
Cow position:
               
chr23:19370986-19371262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
126, 149
               

               
Conread position:
               
161-493
               

               
Cow position:
               
chr23:5389787-5389440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
106, 22
               

               
Conread position:
               
161-512
               

               
Cow position:
               
chr23:15709983-15710358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
53, 154
               

               
Conread position:
               
166-521
               

               
Cow position:
               
chr23:10553925-10554303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
96, 148
               

               
Conread position:
               
167-484
               

               
Cow position:
               
chr23:33940075-33940408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 193
               

               
Conread position:
               
168-482
               

               
Cow position:
               
chr23:2417535-2417206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 60
               

               
Conread position:
               
168-516
               

               
Cow position:
               
chr23:27997209-27996850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
107, 6
               

               
Conread position:
               
169-500
               

               
Cow position:
               
chr23:8911544-8911210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
13, 111
               

               
Conread position:
               
170-460
               

               
Cow position:
               
chr23:12050437-12050140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
9, 106
               

               
Conread position:
               
172-307
               

               
Cow position:
               
chr23:5400746-5400609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
172-475
               

               
Cow position:
               
chr23:6367688-6367363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
101, 96
               

               
Conread position:
               
173-520
               

               
Cow position:
               
chr23:18796625-18796980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
184, 43
               

               
Conread position:
               
174-422
               

               
Cow position:
               
chr23:4104471-4104219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
113, 35
               

               
Conread position:
               
174-499
               

               
Cow position:
               
chr23:16563914-16563575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 241
               

               
Conread position:
               
174-510
               

               
Cow position:
               
chr23:24867385-24867022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
179-378
               

               
Cow position:
               
chr23:3408840-3409045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
179-466
               

               
Cow position:
               
chr23:417218-416929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
122, 96
               

               
Conread position:
               
179-521
               

               
Cow position:
               
chr23:1605299-1604935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
111, 100
               

               
Conread position:
               
181-448
               

               
Cow position:
               
chr23:40648663-40648941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
105, 175
               

               
Conread position:
               
181-495
               

               
Cow position:
               
chr23:36128845-36129165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
123, 21
               

               
Conread position:
               
188-454
               

               
Cow position:
               
chr23:1490102-1489837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
89, 211
               

               
Conread position:
               
192-499
               

               
Cow position:
               
chr23:8959653-8959332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
132, 32
               

               
Conread position:
               
196-499
               

               
Cow position:
               
chr23:3918041-3918365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
14, 40
               

               
Conread position:
               
196-499
               

               
Cow position:
               
chr23:9594782-9595096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
81, 15
               

               
Conread position:
               
214-454
               

               
Cow position:
               
chr23:4504866-4504608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
65, 44
               

               
Conread position:
               
215-481
               

               
Cow position:
               
chr23:670654-670370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
109, 58
               

               
Conread position:
               
215-498
               

               
Cow position:
               
chr23:16664535-16664816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
68, 182
               

               
Conread position:
               
225-528
               

               
Cow position:
               
chr23:14191579-14191254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
45, 285
               

               
Conread position:
               
227-499
               

               
Cow position:
               
chr23:18204489-18204215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
237, 0
               

               
Conread position:
               
230-486
               

               
Cow position:
               
chr23:19978934-19979202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
96, 45
               

               
Conread position:
               
230-497
               

               
Cow position:
               
chr23:4338591-4338871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
81, 271
               

               
Conread position:
               
233-510
               

               
Cow position:
               
chr23:41285936-41285652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
46, 218
               

               
Conread position:
               
237-499
               

               
Cow position:
               
chr23:353577-353845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 77
               

               
Conread position:
               
242-499
               

               
Cow position:
               
chr23:40633179-40633445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
248-498
               

               
Cow position:
               
chr23:4005167-4005430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 192
               

               
Conread position:
               
251-498
               

               
Cow position:
               
chr23:10415042-10415292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
252-497
               

               
Cow position:
               
chr23:1719506-1719254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
49, 37
               

               
Conread position:
               
254-499
               

               
Cow position:
               
chr23:406176-406425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
68, 58
               

               
Conread position:
               
265-499
               

               
Cow position:
               
chr23:39309140-39309382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
265-505
               

               
Cow position:
               
chr23:39899366-39899117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
9, 21
               

               
Conread position:
               
271-486
               

               
Cow position:
               
chr23:31654412-31654187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 42
               

               
Conread position:
               
278-500
               

               
Cow position:
               
chr23:16058565-16058331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
280-466
               

               
Cow position:
               
chr23:7485033-7484848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
76, 31
               

               
Conread position:
               
281-510
               

               
Cow position:
               
chr23:29824103-29824344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
30, 189
               

               
Conread position:
               
299-486
               

               
Cow position:
               
chr23:5395482-5395679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
300-477
               

               
Cow position:
               
chr23:6767828-6767647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
86, 177
               

               
Conread position:
               
300-480
               

               
Cow position:
               
chr23:41348707-41348896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
300-499
               

               
Cow position:
               
chr23:7790981-7791180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
50, 65
               

               
Conread position:
               
301-469
               

               
Cow position:
               
chr23:3910066-3910240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
31, 100
               

               
Conread position:
               
301-498
               

               
Cow position:
               
chr23:3247521-3247322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
161, 105
               

               
Conread position:
               
301-499
               

               
Cow position:
               
chr23:26741520-26741717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
48, 92
               

               
Conread position:
               
302-499
               

               
Cow position:
               
chr23:6995047-6995236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
303-447
               

               
Cow position:
               
chr23:18296743-18296595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
303-453
               

               
Cow position:
               
chr23:1068378-1068531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
303-459
               

               
Cow position:
               
chr23:5723479-5723319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
303-466
               

               
Cow position:
               
chr23:11081010-11080850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
52, 27
               

               
Conread position:
               
303-479
               

               
Cow position:
               
chr23:13359747-13359573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
149, 26
               

               
Conread position:
               
303-480
               

               
Cow position:
               
chr23:36725978-36726162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
47, 28
               

               
Conread position:
               
303-487
               

               
Cow position:
               
chr23:26632737-26632545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
303-489
               

               
Cow position:
               
chr23:1991494-1991684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 27
               

               
Conread position:
               
303-489
               

               
Cow position:
               
chr23:15056708-15056898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
303-489
               

               
Cow position:
               
chr23:20056932-20057124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
303-489
               

               
Cow position:
               
chr23:26319352-26319160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
79, 23
               

               
Conread position:
               
303-494
               

               
Cow position:
               
chr23:3727461-3727663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
303-494
               

               
Cow position:
               
chr23:27862267-27862072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
303-497
               

               
Cow position:
               
chr23:587334-587130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
303-497
               

               
Cow position:
               
chr23:38414028-38414222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr23:3208686-3208883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
86, 9
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr23:360981-361176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
159, 74
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr23:1670836-1670650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
159, 42
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr23:7402636-7402439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
159, 94
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr23:7596397-7596598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
52, 81
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr23:10014473-10014278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 138
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr23:18367634-18367429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 186
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr23:21336552-21336756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
52, 98
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr23:29441060-29441267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr23:39793385-39793186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
99, 85
               

               
Conread position:
               
303-506
               

               
Cow position:
               
chr23:27563778-27563983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
52, 22
               

               
Conread position:
               
303-508
               

               
Cow position:
               
chr23:33695838-33696050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
47, 27
               

               
Conread position:
               
303-515
               

               
Cow position:
               
chr23:1605611-1605397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
83, 64
               

               
Conread position:
               
303-518
               

               
Cow position:
               
chr23:222003-221781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
86, 60
               

               
Conread position:
               
303-518
               

               
Cow position:
               
chr23:1803725-1803508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
303-520
               

               
Cow position:
               
chr23:25358667-25358442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
124, 29
               

               
Conread position:
               
303-535
               

               
Cow position:
               
chr23:2259661-2259899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
22, 193
               

               
Conread position:
               
303-548
               

               
Cow position:
               
chr23:19002128-19002387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
25, 115
               

               
Conread position:
               
304-437
               

               
Cow position:
               
chr23:30656241-30656377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
49, 59
               

               
Conread position:
               
304-460
               

               
Cow position:
               
chr23:4421049-4421202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
37, 94
               

               
Conread position:
               
304-463
               

               
Cow position:
               
chr23:809101-808939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
51, 115
               

               
Conread position:
               
304-466
               

               
Cow position:
               
chr23:25189278-25189110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
52, 136
               

               
Conread position:
               
304-476
               

               
Cow position:
               
chr23:2055639-2055458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
304-476
               

               
Cow position:
               
chr23:13599278-13599098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
304-477
               

               
Cow position:
               
chr23:7321867-7322042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 115
               

               
Conread position:
               
304-482
               

               
Cow position:
               
chr23:38248827-38248650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
304-486
               

               
Cow position:
               
chr23:7221075-7221268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
304-487
               

               
Cow position:
               
chr23:38854803-38854989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
85, 46
               

               
Conread position:
               
304-489
               

               
Cow position:
               
chr23:22588332-22588527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
25, 133
               

               
Conread position:
               
304-489
               

               
Cow position:
               
chr23:32105804-32105617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
50, 61
               

               
Conread position:
               
304-491
               

               
Cow position:
               
chr23:41589977-41590168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
304-495
               

               
Cow position:
               
chr23:23470875-23470691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 99
               

               
Conread position:
               
304-496
               

               
Cow position:
               
chr23:32309605-32309417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
93, 39
               

               
Conread position:
               
304-497
               

               
Cow position:
               
chr23:4597995-4598198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
304-497
               

               
Cow position:
               
chr23:40781259-40781063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
304-498
               

               
Cow position:
               
chr23:25408766-25408574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
304-498
               

               
Cow position:
               
chr23:32961432-32961634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr23:6158287-6158473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
45, 66
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr23:6720349-6720543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
51, 77
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr23:20752947-20752746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr23:33232976-33233172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
51, 85
               

               
Conread position:
               
304-500
               

               
Cow position:
               
chr23:19636327-19636531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
304-520
               

               
Cow position:
               
chr23:19538062-19538282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
305-466
               

               
Cow position:
               
chr23:35254306-35254469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
305-486
               

               
Cow position:
               
chr23:36146523-36146709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 81
               

               
Conread position:
               
306-494
               

               
Cow position:
               
chr23:20435121-20435311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
306-496
               

               
Cow position:
               
chr23:28053207-28053013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
51, 21
               

               
Conread position:
               
306-503
               

               
Cow position:
               
chr23:12896671-12896873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 43
               

               
Conread position:
               
306-509
               

               
Cow position:
               
chr23:14739379-14739172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
95, 44
               

               
Conread position:
               
307-507
               

               
Cow position:
               
chr23:18698093-18698300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
309-495
               

               
Cow position:
               
chr23:2371301-2371119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
88, 20
               

               
Conread position:
               
309-497
               

               
Cow position:
               
chr23:1647547-1647364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
155, 74
               

               
Conread position:
               
309-497
               

               
Cow position:
               
chr23:14895872-14896068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
309-499
               

               
Cow position:
               
chr23:479460-479260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
309-499
               

               
Cow position:
               
chr23:28118171-28118368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
309-499
               

               
Cow position:
               
chr23:33601599-33601787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
46, 91
               

               
Conread position:
               
309-520
               

               
Cow position:
               
chr23:21343322-21343535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
80, 33
               

               
Conread position:
               
309-520
               

               
Cow position:
               
chr23:36199219-36199004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
69, 36
               

               
Conread position:
               
310-498
               

               
Cow position:
               
chr23:21446047-21445859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
45, 65
               

               
Conread position:
               
310-499
               

               
Cow position:
               
chr23:31607227-31607427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
311-495
               

               
Cow position:
               
chr23:12408581-12408774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
18, 113
               

               
Conread position:
               
311-498
               

               
Cow position:
               
chr23:1610781-1610586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
75, 132
               

               
Conread position:
               
311-499
               

               
Cow position:
               
chr23:1321273-1321461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
150, 31
               

               
Conread position:
               
311-499
               

               
Cow position:
               
chr23:37992917-37992729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
35, 153
               

               
Conread position:
               
311-507
               

               
Cow position:
               
chr23:10085255-10085459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
41, 65
               

               
Conread position:
               
311-520
               

               
Cow position:
               
chr23:4562812-4562598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
41, 131
               

               
Conread position:
               
312-468
               

               
Cow position:
               
chr23:4523050-4523212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
312-495
               

               
Cow position:
               
chr23:11380327-11380521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
313-493
               

               
Cow position:
               
chr23:16170618-16170438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 64
               

               
Conread position:
               
313-499
               

               
Cow position:
               
chr23:16609883-16610077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
313-500
               

               
Cow position:
               
chr23:1009476-1009669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
315-499
               

               
Cow position:
               
chr23:26322510-26322692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 15
               

               
Conread position:
               
315-499
               

               
Cow position:
               
chr23:35926515-35926327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
316-466
               

               
Cow position:
               
chr23:22674518-22674669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
316-499
               

               
Cow position:
               
chr23:24505171-24504982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 134
               

               
Conread position:
               
317-492
               

               
Cow position:
               
chr23:4608461-4608642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 48
               

               
Conread position:
               
318-497
               

               
Cow position:
               
chr23:29742303-29742119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
71, 32
               

               
Conread position:
               
318-525
               

               
Cow position:
               
chr23:13515098-13514886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
319-498
               

               
Cow position:
               
chr23:1429876-1430062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
322-499
               

               
Cow position:
               
chr23:1664606-1664421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
325-500
               

               
Cow position:
               
chr23:17875797-17875968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 66
               

               
Conread position:
               
327-499
               

               
Cow position:
               
chr23:8917941-8918120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
330-499
               

               
Cow position:
               
chr23:7937637-7937806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
132, 17
               

               
Conread position:
               
335-499
               

               
Cow position:
               
chr23:31354254-31354080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
335-500
               

               
Cow position:
               
chr23:9235169-9235331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
127, 45
               

               
Conread position:
               
335-533
               

               
Cow position:
               
chr23:35362871-35363076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
336-466
               

               
Cow position:
               
chr23:10876329-10876198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 99
               

               
Conread position:
               
336-499
               

               
Cow position:
               
chr23:1905932-1905761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
339-499
               

               
Cow position:
               
chr23:1546113-1545950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 78
               

               
Conread position:
               
340-510
               

               
Cow position:
               
chr23:35366202-35366378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
49, 9
               

               
Conread position:
               
340-516
               

               
Cow position:
               
chr23:1696722-1696543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 118
               

               
Conread position:
               
341-493
               

               
Cow position:
               
chr23:3168145-3167982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
341-499
               

               
Cow position:
               
chr23:20001961-20001809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
120, 50
               

               
Conread position:
               
342-492
               

               
Cow position:
               
chr23:208729-208581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
343-498
               

               
Cow position:
               
chr23:20026064-20025906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 102
               

               
Conread position:
               
346-499
               

               
Cow position:
               
chr23:666219-666377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
347-495
               

               
Cow position:
               
chr23:11209901-11209746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
349-499
               

               
Cow position:
               
chr23:5151880-5151712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
350-492
               

               
Cow position:
               
chr23:38208598-38208453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
350-499
               

               
Cow position:
               
chr23:25363235-25363076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
350-500
               

               
Cow position:
               
chr23:26003951-26003796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
350-510
               

               
Cow position:
               
chr23:39780496-39780332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
71, 26
               

               
Conread position:
               
351-494
               

               
Cow position:
               
chr23:3434073-3434210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
113, 21
               

               
Conread position:
               
352-498
               

               
Cow position:
               
chr23:2802407-2802558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
354-514
               

               
Cow position:
               
chr23:9712998-9712830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
356-500
               

               
Cow position:
               
chr23:27529412-27529559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
364-488
               

               
Cow position:
               
chr23:769713-769846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
366-499
               

               
Cow position:
               
chr23:16073099-16072963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
376-497
               

               
Cow position:
               
chr23:34611930-34612049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
385-490
               

               
Cow position:
               
chr23:5744947-5744839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
385-525
               

               
Cow position:
               
chr23:9132816-9132962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
386-498
               

               
Cow position:
               
chr23:36172395-36172282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
78, 9
               

               
Conread position:
               
386-526
               

               
Cow position:
               
chr23:14580645-14580785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
388-492
               

               
Cow position:
               
chr23:13674071-13674177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 40
               

               
Conread position:
               
398-495
               

               
Cow position:
               
chr23:13945594-13945494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               
Show alignments to all cow chromosomes.