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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8023L17.3
        

               
Conread position:
               
1-521
               

               
Cow position:
               
chr3:17710558-17710023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
12, 53
               

               
Conread position:
               
4-377
               

               
Cow position:
               
chr3:48072666-48073039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 76
               

               
Conread position:
               
5-499
               

               
Cow position:
               
chr3:80973565-80973061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
7-497
               

               
Cow position:
               
chr3:54049816-54050309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 36
               

               
Conread position:
               
10-498
               

               
Cow position:
               
chr3:31309141-31309645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 69
               

               
Conread position:
               
12-296
               

               
Cow position:
               
chr3:72342457-72342170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
132, 10
               

               
Conread position:
               
12-486
               

               
Cow position:
               
chr3:78443362-78443842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
144, 42
               

               
Conread position:
               
12-498
               

               
Cow position:
               
chr3:55970726-55970216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 10
               

               
Conread position:
               
13-466
               

               
Cow position:
               
chr3:75080958-75080510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 31
               

               
Conread position:
               
13-500
               

               
Cow position:
               
chr3:54903775-54903280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
111, 46
               

               
Conread position:
               
14-348
               

               
Cow position:
               
chr3:49363314-49362992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
14-449
               

               
Cow position:
               
chr3:22232463-22232882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
275, 29
               

               
Conread position:
               
14-487
               

               
Cow position:
               
chr3:49482508-49482984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
134, 29
               

               
Conread position:
               
14-498
               

               
Cow position:
               
chr3:77271079-77271559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
284, 60
               

               
Conread position:
               
14-499
               

               
Cow position:
               
chr3:2675239-2674737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 21
               

               
Conread position:
               
15-284
               

               
Cow position:
               
chr3:56948891-56949149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
15-499
               

               
Cow position:
               
chr3:1830367-1830857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
15-499
               

               
Cow position:
               
chr3:68587224-68586746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
47, 28
               

               
Conread position:
               
16-479
               

               
Cow position:
               
chr3:51578113-51578593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
20, 107
               

               
Conread position:
               
17-331
               

               
Cow position:
               
chr3:48468380-48468063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
97, 41
               

               
Conread position:
               
17-395
               

               
Cow position:
               
chr3:79824715-79825099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
155, 41
               

               
Conread position:
               
17-450
               

               
Cow position:
               
chr3:39661249-39661690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
107, 122
               

               
Conread position:
               
17-497
               

               
Cow position:
               
chr3:31297954-31298450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
17-499
               

               
Cow position:
               
chr3:59391922-59392399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
171, 26
               

               
Conread position:
               
17-499
               

               
Cow position:
               
chr3:79591692-79592181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
16, 51
               

               
Conread position:
               
17-522
               

               
Cow position:
               
chr3:53738974-53739510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 126
               

               
Conread position:
               
18-465
               

               
Cow position:
               
chr3:74620786-74621252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
46, 38
               

               
Conread position:
               
18-472
               

               
Cow position:
               
chr3:60933620-60933150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 27
               

               
Conread position:
               
18-498
               

               
Cow position:
               
chr3:8591164-8591634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
120, 146
               

               
Conread position:
               
18-499
               

               
Cow position:
               
chr3:17221928-17222435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 412
               

               
Conread position:
               
18-499
               

               
Cow position:
               
chr3:50768881-50768387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 25
               

               
Conread position:
               
18-499
               

               
Cow position:
               
chr3:67929053-67929558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
22, 90
               

               
Conread position:
               
18-499
               

               
Cow position:
               
chr3:72474125-72473615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
123, 42
               

               
Conread position:
               
18-499
               

               
Cow position:
               
chr3:83491284-83490784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
161, 111
               

               
Conread position:
               
18-501
               

               
Cow position:
               
chr3:9662970-9663481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
125, 22
               

               
Conread position:
               
19-352
               

               
Cow position:
               
chr3:18426495-18426840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 115
               

               
Conread position:
               
19-427
               

               
Cow position:
               
chr3:15671951-15672361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
150, 39
               

               
Conread position:
               
19-489
               

               
Cow position:
               
chr3:14801946-14801469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
140, 40
               

               
Conread position:
               
19-489
               

               
Cow position:
               
chr3:80565164-80564681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
19-499
               

               
Cow position:
               
chr3:53271032-53270534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 25
               

               
Conread position:
               
19-500
               

               
Cow position:
               
chr3:53428717-53429184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
440, 24
               

               
Conread position:
               
19-500
               

               
Cow position:
               
chr3:71496923-71497439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
26, 43
               

               
Conread position:
               
20-434
               

               
Cow position:
               
chr3:74754515-74754105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
11, 24
               

               
Conread position:
               
20-466
               

               
Cow position:
               
chr3:74087975-74088429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
106, 127
               

               
Conread position:
               
20-514
               

               
Cow position:
               
chr3:30462974-30463472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 71
               

               
Conread position:
               
20-516
               

               
Cow position:
               
chr3:48851765-48852274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 111
               

               
Conread position:
               
21-277
               

               
Cow position:
               
chr3:9121043-9120791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 62
               

               
Conread position:
               
21-465
               

               
Cow position:
               
chr3:26971012-26970570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
120, 44
               

               
Conread position:
               
21-499
               

               
Cow position:
               
chr3:53384079-53384575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
126, 89
               

               
Conread position:
               
22-257
               

               
Cow position:
               
chr3:22924182-22924409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
22-307
               

               
Cow position:
               
chr3:69785421-69785709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
89, 36
               

               
Conread position:
               
22-383
               

               
Cow position:
               
chr3:32787660-32787289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
102, 21
               

               
Conread position:
               
22-403
               

               
Cow position:
               
chr3:30941004-30940623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
109, 36
               

               
Conread position:
               
22-485
               

               
Cow position:
               
chr3:74234379-74233922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 30
               

               
Conread position:
               
22-493
               

               
Cow position:
               
chr3:2518341-2518823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
70, 92
               

               
Conread position:
               
22-499
               

               
Cow position:
               
chr3:59605043-59604579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 122
               

               
Conread position:
               
22-520
               

               
Cow position:
               
chr3:66884834-66885354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 20
               

               
Conread position:
               
23-307
               

               
Cow position:
               
chr3:64197023-64196741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
261, 35
               

               
Conread position:
               
23-386
               

               
Cow position:
               
chr3:75107972-75107620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
23-452
               

               
Cow position:
               
chr3:12705349-12705801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
261, 35
               

               
Conread position:
               
23-466
               

               
Cow position:
               
chr3:30008708-30009166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
79, 35
               

               
Conread position:
               
23-481
               

               
Cow position:
               
chr3:54946318-54945851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 30
               

               
Conread position:
               
23-494
               

               
Cow position:
               
chr3:65237222-65236738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
16, 34
               

               
Conread position:
               
23-497
               

               
Cow position:
               
chr3:17957659-17957177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 33
               

               
Conread position:
               
23-499
               

               
Cow position:
               
chr3:55189552-55190042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 35
               

               
Conread position:
               
23-499
               

               
Cow position:
               
chr3:79902695-79902211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 35
               

               
Conread position:
               
23-520
               

               
Cow position:
               
chr3:27274720-27274227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 18
               

               
Conread position:
               
24-441
               

               
Cow position:
               
chr3:78092313-78092740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 121
               

               
Conread position:
               
24-494
               

               
Cow position:
               
chr3:61224550-61225022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 97
               

               
Conread position:
               
24-495
               

               
Cow position:
               
chr3:4461294-4461777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 22
               

               
Conread position:
               
25-285
               

               
Cow position:
               
chr3:51608988-51609247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
118, 28
               

               
Conread position:
               
25-304
               

               
Cow position:
               
chr3:58134487-58134767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
25-307
               

               
Cow position:
               
chr3:59299764-59299493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
155, 18
               

               
Conread position:
               
25-419
               

               
Cow position:
               
chr3:38828949-38828554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
22, 35
               

               
Conread position:
               
25-426
               

               
Cow position:
               
chr3:4319916-4319494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
72, 253
               

               
Conread position:
               
25-466
               

               
Cow position:
               
chr3:71238346-71237901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
24, 33
               

               
Conread position:
               
25-498
               

               
Cow position:
               
chr3:81087440-81087897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
124, 33
               

               
Conread position:
               
25-516
               

               
Cow position:
               
chr3:2025402-2024877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
16, 512
               

               
Conread position:
               
26-307
               

               
Cow position:
               
chr3:22165220-22165500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
164, 32
               

               
Conread position:
               
26-487
               

               
Cow position:
               
chr3:38864317-38863833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 89
               

               
Conread position:
               
26-497
               

               
Cow position:
               
chr3:23471271-23471758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
244, 27
               

               
Conread position:
               
26-499
               

               
Cow position:
               
chr3:15953887-15954369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
87, 30
               

               
Conread position:
               
26-499
               

               
Cow position:
               
chr3:25690995-25690496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
105, 30
               

               
Conread position:
               
26-499
               

               
Cow position:
               
chr3:27553727-27553259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
26-499
               

               
Cow position:
               
chr3:53592491-53592992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
26-500
               

               
Cow position:
               
chr3:61539993-61539503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
100, 35
               

               
Conread position:
               
26-507
               

               
Cow position:
               
chr3:23168876-23169369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 21
               

               
Conread position:
               
26-509
               

               
Cow position:
               
chr3:3032605-3032095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
99, 119
               

               
Conread position:
               
26-516
               

               
Cow position:
               
chr3:59649445-59648948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
132, 15
               

               
Conread position:
               
27-353
               

               
Cow position:
               
chr3:17331915-17331585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 76
               

               
Conread position:
               
27-387
               

               
Cow position:
               
chr3:76922480-76922838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
59, 25
               

               
Conread position:
               
27-426
               

               
Cow position:
               
chr3:45211497-45211079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
118, 19
               

               
Conread position:
               
27-487
               

               
Cow position:
               
chr3:26066177-26065721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 15
               

               
Conread position:
               
27-487
               

               
Cow position:
               
chr3:39873511-39873941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 85
               

               
Conread position:
               
27-495
               

               
Cow position:
               
chr3:71247207-71246749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
118, 31
               

               
Conread position:
               
27-498
               

               
Cow position:
               
chr3:15228645-15229110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
15, 67
               

               
Conread position:
               
27-498
               

               
Cow position:
               
chr3:20802445-20802920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
198, 93
               

               
Conread position:
               
28-487
               

               
Cow position:
               
chr3:75158548-75158085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
123, 22
               

               
Conread position:
               
28-495
               

               
Cow position:
               
chr3:30180275-30179794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 15
               

               
Conread position:
               
28-496
               

               
Cow position:
               
chr3:79221046-79220560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
219, 18
               

               
Conread position:
               
28-499
               

               
Cow position:
               
chr3:16547864-16547384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 261
               

               
Conread position:
               
28-499
               

               
Cow position:
               
chr3:48253072-48252605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
259, 28
               

               
Conread position:
               
28-499
               

               
Cow position:
               
chr3:53910299-53909822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
131, 30
               

               
Conread position:
               
28-510
               

               
Cow position:
               
chr3:18067324-18066829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
77, 54
               

               
Conread position:
               
28-513
               

               
Cow position:
               
chr3:73961500-73961987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
29-320
               

               
Cow position:
               
chr3:76270078-76269802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
29-442
               

               
Cow position:
               
chr3:68156918-68156498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 23
               

               
Conread position:
               
29-497
               

               
Cow position:
               
chr3:29813418-29812954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 29
               

               
Conread position:
               
29-498
               

               
Cow position:
               
chr3:9641745-9641273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 13
               

               
Conread position:
               
29-499
               

               
Cow position:
               
chr3:7337597-7338073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
29-499
               

               
Cow position:
               
chr3:49383161-49382660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
29-499
               

               
Cow position:
               
chr3:77188630-77188154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
108, 22
               

               
Conread position:
               
30-252
               

               
Cow position:
               
chr3:67407179-67407395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
30-466
               

               
Cow position:
               
chr3:82019654-82020100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
251, 16
               

               
Conread position:
               
30-496
               

               
Cow position:
               
chr3:29596586-29596106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
84, 28
               

               
Conread position:
               
30-498
               

               
Cow position:
               
chr3:18393210-18393673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
30-498
               

               
Cow position:
               
chr3:83474942-83474458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 13
               

               
Conread position:
               
30-499
               

               
Cow position:
               
chr3:68648369-68647868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
118, 141
               

               
Conread position:
               
31-283
               

               
Cow position:
               
chr3:68004522-68004763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
243, 12
               

               
Conread position:
               
31-497
               

               
Cow position:
               
chr3:17936657-17937129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 27
               

               
Conread position:
               
31-497
               

               
Cow position:
               
chr3:76172492-76172952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
282, 27
               

               
Conread position:
               
31-499
               

               
Cow position:
               
chr3:210511-210030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 12
               

               
Conread position:
               
31-504
               

               
Cow position:
               
chr3:55116787-55117269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
224, 25
               

               
Conread position:
               
32-460
               

               
Cow position:
               
chr3:5044620-5045060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
106, 131
               

               
Conread position:
               
32-495
               

               
Cow position:
               
chr3:39969674-39970160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 26
               

               
Conread position:
               
32-499
               

               
Cow position:
               
chr3:31055823-31056294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
118, 50
               

               
Conread position:
               
32-499
               

               
Cow position:
               
chr3:71231587-71231114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
33-362
               

               
Cow position:
               
chr3:29946575-29946244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
110, 23
               

               
Conread position:
               
33-466
               

               
Cow position:
               
chr3:7330946-7331373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
33-488
               

               
Cow position:
               
chr3:17456076-17456550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
12, 132
               

               
Conread position:
               
33-495
               

               
Cow position:
               
chr3:20663353-20663826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
97, 136
               

               
Conread position:
               
34-497
               

               
Cow position:
               
chr3:15159222-15158751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
34-497
               

               
Cow position:
               
chr3:68707834-68708291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 86
               

               
Conread position:
               
34-498
               

               
Cow position:
               
chr3:3985503-3985039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
272, 24
               

               
Conread position:
               
34-499
               

               
Cow position:
               
chr3:57577884-57577407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 58
               

               
Conread position:
               
34-499
               

               
Cow position:
               
chr3:79884294-79884778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
80, 11
               

               
Conread position:
               
34-534
               

               
Cow position:
               
chr3:11727883-11728412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
122, 37
               

               
Conread position:
               
35-499
               

               
Cow position:
               
chr3:11253977-11254444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
5, 247
               

               
Conread position:
               
35-499
               

               
Cow position:
               
chr3:24548645-24549124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
40, 8
               

               
Conread position:
               
35-499
               

               
Cow position:
               
chr3:37041603-37041137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
36-494
               

               
Cow position:
               
chr3:83454973-83455435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
238, 10
               

               
Conread position:
               
36-496
               

               
Cow position:
               
chr3:13899268-13899742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
273, 108
               

               
Conread position:
               
37-278
               

               
Cow position:
               
chr3:8349388-8349620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
188, 15
               

               
Conread position:
               
37-320
               

               
Cow position:
               
chr3:15950732-15951006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
49, 91
               

               
Conread position:
               
37-386
               

               
Cow position:
               
chr3:68616151-68616499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
246, 14
               

               
Conread position:
               
37-469
               

               
Cow position:
               
chr3:43233687-43233244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
142, 21
               

               
Conread position:
               
37-487
               

               
Cow position:
               
chr3:57764399-57763943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
37-495
               

               
Cow position:
               
chr3:14553057-14552590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 80
               

               
Conread position:
               
37-498
               

               
Cow position:
               
chr3:10958060-10958519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 21
               

               
Conread position:
               
37-498
               

               
Cow position:
               
chr3:14465530-14465995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
234, 41
               

               
Conread position:
               
37-498
               

               
Cow position:
               
chr3:78077375-78076898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 101
               

               
Conread position:
               
37-521
               

               
Cow position:
               
chr3:54781807-54782328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
15, 384
               

               
Conread position:
               
38-352
               

               
Cow position:
               
chr3:78093209-78093524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
248, 47
               

               
Conread position:
               
38-498
               

               
Cow position:
               
chr3:68880950-68881400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 7
               

               
Conread position:
               
38-499
               

               
Cow position:
               
chr3:59610535-59611008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 74
               

               
Conread position:
               
39-493
               

               
Cow position:
               
chr3:80740736-80740292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
238, 39
               

               
Conread position:
               
40-499
               

               
Cow position:
               
chr3:22675926-22676374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 18
               

               
Conread position:
               
43-273
               

               
Cow position:
               
chr3:23131990-23132219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
106, 15
               

               
Conread position:
               
43-276
               

               
Cow position:
               
chr3:11281947-11281713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
106, 15
               

               
Conread position:
               
43-468
               

               
Cow position:
               
chr3:56476852-56476423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 15
               

               
Conread position:
               
43-493
               

               
Cow position:
               
chr3:8393518-8393060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
236, 27
               

               
Conread position:
               
43-495
               

               
Cow position:
               
chr3:7763836-7763375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
121, 15
               

               
Conread position:
               
43-497
               

               
Cow position:
               
chr3:20996823-20997266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
136, 81
               

               
Conread position:
               
43-498
               

               
Cow position:
               
chr3:33252714-33253169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 15
               

               
Conread position:
               
43-533
               

               
Cow position:
               
chr3:53790363-53790873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 49
               

               
Conread position:
               
45-282
               

               
Cow position:
               
chr3:49344869-49344634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
97, 33
               

               
Conread position:
               
45-499
               

               
Cow position:
               
chr3:49118854-49119324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
110, 13
               

               
Conread position:
               
46-231
               

               
Cow position:
               
chr3:43895887-43896068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
46-262
               

               
Cow position:
               
chr3:52845731-52845511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
180, 89
               

               
Conread position:
               
46-307
               

               
Cow position:
               
chr3:1037204-1036944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
85, 69
               

               
Conread position:
               
46-307
               

               
Cow position:
               
chr3:19682881-19682609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
46-344
               

               
Cow position:
               
chr3:7662034-7661720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 165
               

               
Conread position:
               
46-362
               

               
Cow position:
               
chr3:55177576-55177903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
236, 12
               

               
Conread position:
               
46-387
               

               
Cow position:
               
chr3:19586040-19585687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
239, 165
               

               
Conread position:
               
46-439
               

               
Cow position:
               
chr3:23105189-23105595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
231, 73
               

               
Conread position:
               
46-448
               

               
Cow position:
               
chr3:63316303-63315893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
224, 106
               

               
Conread position:
               
46-460
               

               
Cow position:
               
chr3:52651904-52652324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 115
               

               
Conread position:
               
46-466
               

               
Cow position:
               
chr3:2506300-2506737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
97, 73
               

               
Conread position:
               
46-467
               

               
Cow position:
               
chr3:18687077-18686659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
185, 80
               

               
Conread position:
               
46-479
               

               
Cow position:
               
chr3:44932687-44932244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 12
               

               
Conread position:
               
46-492
               

               
Cow position:
               
chr3:65058875-65058417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 103
               

               
Conread position:
               
46-495
               

               
Cow position:
               
chr3:2392794-2393254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
141, 12
               

               
Conread position:
               
46-497
               

               
Cow position:
               
chr3:24939046-24939515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 14
               

               
Conread position:
               
46-498
               

               
Cow position:
               
chr3:48363244-48362792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 12
               

               
Conread position:
               
46-498
               

               
Cow position:
               
chr3:54435144-54434683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
241, 88
               

               
Conread position:
               
46-499
               

               
Cow position:
               
chr3:45882075-45881617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 13
               

               
Conread position:
               
46-499
               

               
Cow position:
               
chr3:53222187-53221727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 12
               

               
Conread position:
               
46-499
               

               
Cow position:
               
chr3:65969349-65968863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
46-500
               

               
Cow position:
               
chr3:13353540-13353067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 13
               

               
Conread position:
               
46-505
               

               
Cow position:
               
chr3:51233928-51234387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
257, 82
               

               
Conread position:
               
46-510
               

               
Cow position:
               
chr3:59474296-59473811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
248, 66
               

               
Conread position:
               
47-387
               

               
Cow position:
               
chr3:36418312-36418641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
47-387
               

               
Cow position:
               
chr3:70761948-70762298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
235, 81
               

               
Conread position:
               
47-484
               

               
Cow position:
               
chr3:23408189-23408619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 38
               

               
Conread position:
               
47-484
               

               
Cow position:
               
chr3:73395290-73394843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
225, 53
               

               
Conread position:
               
47-492
               

               
Cow position:
               
chr3:49328108-49327659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
47-493
               

               
Cow position:
               
chr3:75480173-75479726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 71
               

               
Conread position:
               
47-507
               

               
Cow position:
               
chr3:68303493-68303029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
67, 124
               

               
Conread position:
               
48-358
               

               
Cow position:
               
chr3:3883646-3883965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
238, 85
               

               
Conread position:
               
48-466
               

               
Cow position:
               
chr3:16333979-16333550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
10, 128
               

               
Conread position:
               
49-307
               

               
Cow position:
               
chr3:10668707-10668962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
118, 9
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr3:31361592-31361336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
173, 6
               

               
Conread position:
               
52-401
               

               
Cow position:
               
chr3:54506875-54506520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 6
               

               
Conread position:
               
52-449
               

               
Cow position:
               
chr3:8061289-8060893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
234, 6
               

               
Conread position:
               
52-482
               

               
Cow position:
               
chr3:15051783-15052212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
137, 6
               

               
Conread position:
               
52-495
               

               
Cow position:
               
chr3:26904268-26903827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 6
               

               
Conread position:
               
52-495
               

               
Cow position:
               
chr3:64280769-64281224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 6
               

               
Conread position:
               
52-495
               

               
Cow position:
               
chr3:74533503-74533060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 6
               

               
Conread position:
               
52-499
               

               
Cow position:
               
chr3:17694833-17695298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
72, 6
               

               
Conread position:
               
52-499
               

               
Cow position:
               
chr3:72777402-72776948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
243, 6
               

               
Conread position:
               
52-507
               

               
Cow position:
               
chr3:70896208-70895747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 6
               

               
Conread position:
               
54-495
               

               
Cow position:
               
chr3:55124117-55124566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
232, 25
               

               
Conread position:
               
55-498
               

               
Cow position:
               
chr3:2538404-2537963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
124, 70
               

               
Conread position:
               
55-499
               

               
Cow position:
               
chr3:27290126-27289645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
46, 219
               

               
Conread position:
               
56-395
               

               
Cow position:
               
chr3:79092218-79092578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 112
               

               
Conread position:
               
56-500
               

               
Cow position:
               
chr3:80202784-80202314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
56-507
               

               
Cow position:
               
chr3:31419861-31419397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
68, 107
               

               
Conread position:
               
57-422
               

               
Cow position:
               
chr3:6182067-6182415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
332, 55
               

               
Conread position:
               
57-433
               

               
Cow position:
               
chr3:70609790-70609400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 37
               

               
Conread position:
               
57-489
               

               
Cow position:
               
chr3:20674714-20675161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
65, 21
               

               
Conread position:
               
57-493
               

               
Cow position:
               
chr3:71161953-71161508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
219, 24
               

               
Conread position:
               
57-498
               

               
Cow position:
               
chr3:53150498-53150036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 45
               

               
Conread position:
               
57-521
               

               
Cow position:
               
chr3:39066494-39066016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
101, 25
               

               
Conread position:
               
58-307
               

               
Cow position:
               
chr3:9117198-9116945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 118
               

               
Conread position:
               
58-308
               

               
Cow position:
               
chr3:75608652-75608413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
223, 62
               

               
Conread position:
               
58-361
               

               
Cow position:
               
chr3:79196927-79196610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
58-491
               

               
Cow position:
               
chr3:2396631-2397067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 77
               

               
Conread position:
               
58-497
               

               
Cow position:
               
chr3:60597701-60597263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
121, 56
               

               
Conread position:
               
58-499
               

               
Cow position:
               
chr3:19711173-19711607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
82, 9
               

               
Conread position:
               
58-499
               

               
Cow position:
               
chr3:56583012-56582551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
76, 107
               

               
Conread position:
               
58-499
               

               
Cow position:
               
chr3:57754311-57754772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
67, 87
               

               
Conread position:
               
58-521
               

               
Cow position:
               
chr3:59000599-59001062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
121, 62
               

               
Conread position:
               
59-269
               

               
Cow position:
               
chr3:26603383-26603601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
59-307
               

               
Cow position:
               
chr3:31349945-31350188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
59-395
               

               
Cow position:
               
chr3:74079475-74079822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 76
               

               
Conread position:
               
59-477
               

               
Cow position:
               
chr3:69416615-69417059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
105, 72
               

               
Conread position:
               
59-487
               

               
Cow position:
               
chr3:53046495-53046937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 84
               

               
Conread position:
               
59-499
               

               
Cow position:
               
chr3:2036467-2036006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
154, 84
               

               
Conread position:
               
59-505
               

               
Cow position:
               
chr3:66900564-66901040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
72, 7
               

               
Conread position:
               
59-529
               

               
Cow position:
               
chr3:18855241-18854774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
65, 92
               

               
Conread position:
               
60-492
               

               
Cow position:
               
chr3:49460764-49461222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
45, 84
               

               
Conread position:
               
60-499
               

               
Cow position:
               
chr3:7566259-7566711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
103, 60
               

               
Conread position:
               
61-274
               

               
Cow position:
               
chr3:53083822-53084039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
84, 66
               

               
Conread position:
               
61-308
               

               
Cow position:
               
chr3:18607824-18607578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
221, 60
               

               
Conread position:
               
61-389
               

               
Cow position:
               
chr3:60264561-60264895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
215, 5
               

               
Conread position:
               
66-254
               

               
Cow position:
               
chr3:35239167-35238982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
43, 49
               

               
Conread position:
               
67-463
               

               
Cow position:
               
chr3:70334537-70334955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
84, 105
               

               
Conread position:
               
67-485
               

               
Cow position:
               
chr3:68627532-68627953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 129
               

               
Conread position:
               
67-507
               

               
Cow position:
               
chr3:74601267-74600816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 67
               

               
Conread position:
               
68-499
               

               
Cow position:
               
chr3:16752100-16752539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 147
               

               
Conread position:
               
72-466
               

               
Cow position:
               
chr3:52608331-52607928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 63
               

               
Conread position:
               
72-499
               

               
Cow position:
               
chr3:18185227-18184776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
72-499
               

               
Cow position:
               
chr3:20130087-20129649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
46, 67
               

               
Conread position:
               
72-507
               

               
Cow position:
               
chr3:65413124-65413575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 69
               

               
Conread position:
               
74-435
               

               
Cow position:
               
chr3:74134855-74134480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
76-488
               

               
Cow position:
               
chr3:77365141-77365575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
65, 329
               

               
Conread position:
               
77-491
               

               
Cow position:
               
chr3:15388367-15387927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
71, 78
               

               
Conread position:
               
84-393
               

               
Cow position:
               
chr3:26982196-26981883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
96, 77
               

               
Conread position:
               
84-431
               

               
Cow position:
               
chr3:11063505-11063157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
45, 76
               

               
Conread position:
               
84-498
               

               
Cow position:
               
chr3:14601565-14602004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
136, 202
               

               
Conread position:
               
84-498
               

               
Cow position:
               
chr3:72391226-72390794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
40, 90
               

               
Conread position:
               
85-497
               

               
Cow position:
               
chr3:54739759-54740161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
143, 27
               

               
Conread position:
               
86-299
               

               
Cow position:
               
chr3:32409356-32409136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
86-485
               

               
Cow position:
               
chr3:32585281-32584880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 28
               

               
Conread position:
               
87-499
               

               
Cow position:
               
chr3:70565599-70566030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 199
               

               
Conread position:
               
89-320
               

               
Cow position:
               
chr3:19626374-19626604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 87
               

               
Conread position:
               
92-489
               

               
Cow position:
               
chr3:26681685-26682075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 43
               

               
Conread position:
               
94-495
               

               
Cow position:
               
chr3:73709175-73708766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
215, 54
               

               
Conread position:
               
94-496
               

               
Cow position:
               
chr3:28898091-28898511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
30, 72
               

               
Conread position:
               
98-466
               

               
Cow position:
               
chr3:73461090-73460722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 38
               

               
Conread position:
               
101-499
               

               
Cow position:
               
chr3:31206996-31206580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
173, 42
               

               
Conread position:
               
101-530
               

               
Cow position:
               
chr3:18498135-18497703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
182, 36
               

               
Conread position:
               
106-313
               

               
Cow position:
               
chr3:20334124-20333917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
198, 189
               

               
Conread position:
               
106-458
               

               
Cow position:
               
chr3:2680630-2680263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
106-499
               

               
Cow position:
               
chr3:51604500-51604899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
178, 41
               

               
Conread position:
               
106-503
               

               
Cow position:
               
chr3:73442981-73443382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 37
               

               
Conread position:
               
110-395
               

               
Cow position:
               
chr3:20677729-20678018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
160, 98
               

               
Conread position:
               
113-307
               

               
Cow position:
               
chr3:15173191-15172995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
113-483
               

               
Cow position:
               
chr3:13507576-13507190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 30
               

               
Conread position:
               
114-445
               

               
Cow position:
               
chr3:17447506-17447843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
154, 95
               

               
Conread position:
               
114-456
               

               
Cow position:
               
chr3:55835709-55836075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
114-495
               

               
Cow position:
               
chr3:50069872-50069492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
65, 58
               

               
Conread position:
               
114-498
               

               
Cow position:
               
chr3:56059918-56059516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 21
               

               
Conread position:
               
120-619
               

               
Cow position:
               
chr3:5100669-5101176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
121-456
               

               
Cow position:
               
chr3:116290-115961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 10
               

               
Conread position:
               
121-458
               

               
Cow position:
               
chr3:57624564-57624219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
188, 14
               

               
Conread position:
               
121-495
               

               
Cow position:
               
chr3:67704648-67704252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 15
               

               
Conread position:
               
122-373
               

               
Cow position:
               
chr3:53508714-53508460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 160
               

               
Conread position:
               
136-492
               

               
Cow position:
               
chr3:10347442-10347069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 77
               

               
Conread position:
               
138-495
               

               
Cow position:
               
chr3:79292913-79292546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
53, 47
               

               
Conread position:
               
138-499
               

               
Cow position:
               
chr3:80053458-80053826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
137, 23
               

               
Conread position:
               
138-500
               

               
Cow position:
               
chr3:55271960-55272333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 239
               

               
Conread position:
               
141-404
               

               
Cow position:
               
chr3:26874672-26874398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
143, 85
               

               
Conread position:
               
141-440
               

               
Cow position:
               
chr3:19404380-19404093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
141-473
               

               
Cow position:
               
chr3:22716215-22716547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
32, 171
               

               
Conread position:
               
141-497
               

               
Cow position:
               
chr3:45647762-45647387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 359
               

               
Conread position:
               
141-498
               

               
Cow position:
               
chr3:3738563-3738200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
142, 70
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr3:29887338-29887716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 46
               

               
Conread position:
               
141-510
               

               
Cow position:
               
chr3:19006739-19006362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 68
               

               
Conread position:
               
141-543
               

               
Cow position:
               
chr3:62826537-62826956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 57
               

               
Conread position:
               
142-460
               

               
Cow position:
               
chr3:18725563-18725884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
167, 119
               

               
Conread position:
               
142-501
               

               
Cow position:
               
chr3:35852390-35852763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
143-469
               

               
Cow position:
               
chr3:23448058-23448390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
135, 17
               

               
Conread position:
               
143-492
               

               
Cow position:
               
chr3:48296777-48296426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
110, 10
               

               
Conread position:
               
143-497
               

               
Cow position:
               
chr3:79148206-79148566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
37, 13
               

               
Conread position:
               
143-499
               

               
Cow position:
               
chr3:59101906-59101543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
143, 5
               

               
Conread position:
               
145-498
               

               
Cow position:
               
chr3:45534218-45534590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 66
               

               
Conread position:
               
145-499
               

               
Cow position:
               
chr3:63177561-63177222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
168, 130
               

               
Conread position:
               
146-498
               

               
Cow position:
               
chr3:72676168-72675796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
157, 132
               

               
Conread position:
               
146-499
               

               
Cow position:
               
chr3:26218974-26219353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 129
               

               
Conread position:
               
146-499
               

               
Cow position:
               
chr3:70401973-70401611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 56
               

               
Conread position:
               
148-323
               

               
Cow position:
               
chr3:3472115-3471940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
124, 105
               

               
Conread position:
               
148-425
               

               
Cow position:
               
chr3:60265179-60265451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
151, 63
               

               
Conread position:
               
148-437
               

               
Cow position:
               
chr3:15506523-15506220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
122, 56
               

               
Conread position:
               
148-480
               

               
Cow position:
               
chr3:525421-525081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 256
               

               
Conread position:
               
148-487
               

               
Cow position:
               
chr3:67744553-67744908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
162, 122
               

               
Conread position:
               
148-491
               

               
Cow position:
               
chr3:73764125-73764477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
156, 53
               

               
Conread position:
               
148-492
               

               
Cow position:
               
chr3:61840350-61840004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
127, 72
               

               
Conread position:
               
148-493
               

               
Cow position:
               
chr3:17934863-17935209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 22
               

               
Conread position:
               
148-496
               

               
Cow position:
               
chr3:83815713-83816082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
143, 37
               

               
Conread position:
               
148-497
               

               
Cow position:
               
chr3:80581730-80581381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
130, 61
               

               
Conread position:
               
148-498
               

               
Cow position:
               
chr3:58968828-58969183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 259
               

               
Conread position:
               
148-498
               

               
Cow position:
               
chr3:64172515-64172154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
158, 119
               

               
Conread position:
               
148-499
               

               
Cow position:
               
chr3:81371724-81371364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 110
               

               
Conread position:
               
148-500
               

               
Cow position:
               
chr3:58767338-58766996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
137, 233
               

               
Conread position:
               
148-500
               

               
Cow position:
               
chr3:80072204-80071824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
148-518
               

               
Cow position:
               
chr3:38347265-38346889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
103, 61
               

               
Conread position:
               
148-521
               

               
Cow position:
               
chr3:12711840-12712240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
148-530
               

               
Cow position:
               
chr3:27940068-27940445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
171, 72
               

               
Conread position:
               
149-411
               

               
Cow position:
               
chr3:7940483-7940757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
126, 71
               

               
Conread position:
               
149-494
               

               
Cow position:
               
chr3:66292102-66292465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
150-498
               

               
Cow position:
               
chr3:75711379-75711028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
147, 118
               

               
Conread position:
               
152-493
               

               
Cow position:
               
chr3:64536489-64536828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
24, 36
               

               
Conread position:
               
153-492
               

               
Cow position:
               
chr3:69750641-69750986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
91, 43
               

               
Conread position:
               
153-499
               

               
Cow position:
               
chr3:26553645-26554000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
94, 125
               

               
Conread position:
               
155-456
               

               
Cow position:
               
chr3:23444820-23445136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
110, 259
               

               
Conread position:
               
155-499
               

               
Cow position:
               
chr3:59799316-59798962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 16
               

               
Conread position:
               
160-497
               

               
Cow position:
               
chr3:56314-56659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
56, 71
               

               
Conread position:
               
161-492
               

               
Cow position:
               
chr3:5374390-5374051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
148, 42
               

               
Conread position:
               
161-495
               

               
Cow position:
               
chr3:37186888-37186548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
141, 19
               

               
Conread position:
               
161-499
               

               
Cow position:
               
chr3:49650450-49650088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
165-518
               

               
Cow position:
               
chr3:66609786-66610151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
141, 64
               

               
Conread position:
               
166-448
               

               
Cow position:
               
chr3:34937901-34937602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
67, 43
               

               
Conread position:
               
166-483
               

               
Cow position:
               
chr3:6873195-6873521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
73, 38
               

               
Conread position:
               
166-491
               

               
Cow position:
               
chr3:59208852-59208530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 42
               

               
Conread position:
               
167-497
               

               
Cow position:
               
chr3:5097263-5096913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 112
               

               
Conread position:
               
167-509
               

               
Cow position:
               
chr3:73759461-73759821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
5, 9
               

               
Conread position:
               
170-497
               

               
Cow position:
               
chr3:17895902-17895564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 106
               

               
Conread position:
               
172-469
               

               
Cow position:
               
chr3:56523393-56523688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 30
               

               
Conread position:
               
173-505
               

               
Cow position:
               
chr3:31046902-31047241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
102, 41
               

               
Conread position:
               
174-477
               

               
Cow position:
               
chr3:70899940-70899630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 55
               

               
Conread position:
               
174-495
               

               
Cow position:
               
chr3:18459479-18459808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
114, 93
               

               
Conread position:
               
174-495
               

               
Cow position:
               
chr3:23111464-23111792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
174-500
               

               
Cow position:
               
chr3:65800634-65800302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
112, 35
               

               
Conread position:
               
174-521
               

               
Cow position:
               
chr3:15684873-15685227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
89, 9
               

               
Conread position:
               
175-491
               

               
Cow position:
               
chr3:80818765-80818449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
112, 127
               

               
Conread position:
               
177-495
               

               
Cow position:
               
chr3:26920954-26920609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
115, 82
               

               
Conread position:
               
177-499
               

               
Cow position:
               
chr3:28908157-28908487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
134, 113
               

               
Conread position:
               
178-435
               

               
Cow position:
               
chr3:56301313-56301573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
178-497
               

               
Cow position:
               
chr3:74878544-74878894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
125, 105
               

               
Conread position:
               
178-498
               

               
Cow position:
               
chr3:15057575-15057889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
178-518
               

               
Cow position:
               
chr3:34953686-34953340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
211, 7
               

               
Conread position:
               
180-498
               

               
Cow position:
               
chr3:46350714-46350365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
107, 13
               

               
Conread position:
               
181-455
               

               
Cow position:
               
chr3:30055415-30055691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
168, 212
               

               
Conread position:
               
181-499
               

               
Cow position:
               
chr3:2216410-2216068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
181-499
               

               
Cow position:
               
chr3:51012511-51012825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
174, 93
               

               
Conread position:
               
181-518
               

               
Cow position:
               
chr3:37599386-37599726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
140, 93
               

               
Conread position:
               
196-497
               

               
Cow position:
               
chr3:63179884-63179578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
77, 115
               

               
Conread position:
               
196-499
               

               
Cow position:
               
chr3:13512723-13513029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
134, 49
               

               
Conread position:
               
196-500
               

               
Cow position:
               
chr3:33698758-33698428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
88, 79
               

               
Conread position:
               
197-431
               

               
Cow position:
               
chr3:22907702-22907938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
124, 112
               

               
Conread position:
               
197-442
               

               
Cow position:
               
chr3:55106413-55106675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
93, 81
               

               
Conread position:
               
197-498
               

               
Cow position:
               
chr3:23416863-23417154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
73, 13
               

               
Conread position:
               
198-487
               

               
Cow position:
               
chr3:75057109-75057394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
81, 22
               

               
Conread position:
               
198-488
               

               
Cow position:
               
chr3:81277673-81277985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
111, 77
               

               
Conread position:
               
200-499
               

               
Cow position:
               
chr3:57553826-57554139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
209-476
               

               
Cow position:
               
chr3:17450926-17451203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 15
               

               
Conread position:
               
209-499
               

               
Cow position:
               
chr3:38252995-38252703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
211-499
               

               
Cow position:
               
chr3:5850917-5851219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
211-499
               

               
Cow position:
               
chr3:62998995-62999293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
61, 95
               

               
Conread position:
               
211-500
               

               
Cow position:
               
chr3:50614653-50614352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 275
               

               
Conread position:
               
212-495
               

               
Cow position:
               
chr3:54340410-54340704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
213-490
               

               
Cow position:
               
chr3:74849041-74849321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
119, 79
               

               
Conread position:
               
215-499
               

               
Cow position:
               
chr3:49793404-49793123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
69, 184
               

               
Conread position:
               
221-499
               

               
Cow position:
               
chr3:31771684-31771408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
97, 41
               

               
Conread position:
               
230-464
               

               
Cow position:
               
chr3:25755017-25754782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
82, 55
               

               
Conread position:
               
230-490
               

               
Cow position:
               
chr3:5416227-5416514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
230-491
               

               
Cow position:
               
chr3:74409478-74409211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
53, 161
               

               
Conread position:
               
233-499
               

               
Cow position:
               
chr3:48530626-48530346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
122, 266
               

               
Conread position:
               
234-492
               

               
Cow position:
               
chr3:19789125-19789404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
72, 50
               

               
Conread position:
               
234-507
               

               
Cow position:
               
chr3:48269854-48269564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
47, 284
               

               
Conread position:
               
235-489
               

               
Cow position:
               
chr3:30701298-30701040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 79
               

               
Conread position:
               
242-489
               

               
Cow position:
               
chr3:52665176-52664920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
242-510
               

               
Cow position:
               
chr3:14717775-14717509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
114, 20
               

               
Conread position:
               
250-499
               

               
Cow position:
               
chr3:61190951-61191209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 41
               

               
Conread position:
               
251-488
               

               
Cow position:
               
chr3:23496592-23496837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
253-498
               

               
Cow position:
               
chr3:13118312-13118058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
18, 38
               

               
Conread position:
               
254-493
               

               
Cow position:
               
chr3:83369274-83369036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
28, 19
               

               
Conread position:
               
262-499
               

               
Cow position:
               
chr3:62542269-62542022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 126
               

               
Conread position:
               
264-495
               

               
Cow position:
               
chr3:8753418-8753176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 7
               

               
Conread position:
               
264-499
               

               
Cow position:
               
chr3:70467865-70468095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
198, 48
               

               
Conread position:
               
265-529
               

               
Cow position:
               
chr3:41947174-41947444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
19, 49
               

               
Conread position:
               
268-498
               

               
Cow position:
               
chr3:51146710-51146957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
269-498
               

               
Cow position:
               
chr3:84153270-84153034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 39
               

               
Conread position:
               
269-499
               

               
Cow position:
               
chr3:48566712-48566959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
273-493
               

               
Cow position:
               
chr3:52722060-52722283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
53, 39
               

               
Conread position:
               
274-499
               

               
Cow position:
               
chr3:16656536-16656760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 38
               

               
Conread position:
               
276-454
               

               
Cow position:
               
chr3:77006441-77006261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 111
               

               
Conread position:
               
276-499
               

               
Cow position:
               
chr3:82618323-82618099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
277-500
               

               
Cow position:
               
chr3:16115498-16115280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
46, 71
               

               
Conread position:
               
279-487
               

               
Cow position:
               
chr3:23478172-23477955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
279-495
               

               
Cow position:
               
chr3:42914388-42914165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
49, 37
               

               
Conread position:
               
284-503
               

               
Cow position:
               
chr3:24276637-24276411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 26
               

               
Conread position:
               
290-499
               

               
Cow position:
               
chr3:77227242-77227026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
99, 13
               

               
Conread position:
               
300-448
               

               
Cow position:
               
chr3:4861599-4861451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
89, 18
               

               
Conread position:
               
300-498
               

               
Cow position:
               
chr3:61857415-61857205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
300-498
               

               
Cow position:
               
chr3:70333564-70333764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
300-499
               

               
Cow position:
               
chr3:53572842-53573042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
50, 30
               

               
Conread position:
               
300-510
               

               
Cow position:
               
chr3:59515016-59514809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
162, 50
               

               
Conread position:
               
301-499
               

               
Cow position:
               
chr3:19708193-19708390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
54, 115
               

               
Conread position:
               
303-442
               

               
Cow position:
               
chr3:79196471-79196610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
303-450
               

               
Cow position:
               
chr3:83201615-83201768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
303-454
               

               
Cow position:
               
chr3:35074592-35074437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
91, 118
               

               
Conread position:
               
303-460
               

               
Cow position:
               
chr3:15752726-15752878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
303-460
               

               
Cow position:
               
chr3:41328357-41328205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
303-466
               

               
Cow position:
               
chr3:4087255-4087422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
303-466
               

               
Cow position:
               
chr3:8604105-8604270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
303-466
               

               
Cow position:
               
chr3:22820477-22820313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 105
               

               
Conread position:
               
303-469
               

               
Cow position:
               
chr3:23270007-23269843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
47, 95
               

               
Conread position:
               
303-469
               

               
Cow position:
               
chr3:28692523-28692691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
50, 96
               

               
Conread position:
               
303-471
               

               
Cow position:
               
chr3:73590090-73590262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
86, 145
               

               
Conread position:
               
303-472
               

               
Cow position:
               
chr3:13577278-13577449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
86, 47
               

               
Conread position:
               
303-472
               

               
Cow position:
               
chr3:82359952-82359785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
303-473
               

               
Cow position:
               
chr3:52650622-52650795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
86, 163
               

               
Conread position:
               
303-477
               

               
Cow position:
               
chr3:2903389-2903560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
303-477
               

               
Cow position:
               
chr3:84000522-84000342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
303-480
               

               
Cow position:
               
chr3:79208089-79208276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
53, 13
               

               
Conread position:
               
303-481
               

               
Cow position:
               
chr3:6853596-6853774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
46, 82
               

               
Conread position:
               
303-483
               

               
Cow position:
               
chr3:74500147-74499948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
303-485
               

               
Cow position:
               
chr3:42367589-42367767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 143
               

               
Conread position:
               
303-486
               

               
Cow position:
               
chr3:42588266-42588070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
303-487
               

               
Cow position:
               
chr3:34392188-34392376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
72, 82
               

               
Conread position:
               
303-489
               

               
Cow position:
               
chr3:20437743-20437927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
159, 16
               

               
Conread position:
               
303-490
               

               
Cow position:
               
chr3:39171574-39171767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
303-491
               

               
Cow position:
               
chr3:81401398-81401584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
303-492
               

               
Cow position:
               
chr3:61278824-61278621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
303-493
               

               
Cow position:
               
chr3:38691498-38691692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
52, 75
               

               
Conread position:
               
303-494
               

               
Cow position:
               
chr3:30418038-30417842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 78
               

               
Conread position:
               
303-494
               

               
Cow position:
               
chr3:61467516-61467322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
86, 19
               

               
Conread position:
               
303-494
               

               
Cow position:
               
chr3:67161851-67161645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
303-494
               

               
Cow position:
               
chr3:73467532-73467332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
303-495
               

               
Cow position:
               
chr3:21341053-21341251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
64, 129
               

               
Conread position:
               
303-495
               

               
Cow position:
               
chr3:23876904-23876710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
52, 93
               

               
Conread position:
               
303-495
               

               
Cow position:
               
chr3:29807374-29807174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
303-495
               

               
Cow position:
               
chr3:34316049-34316252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
303-495
               

               
Cow position:
               
chr3:66375227-66375033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
52, 96
               

               
Conread position:
               
303-495
               

               
Cow position:
               
chr3:82657176-82657373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 51
               

               
Conread position:
               
303-496
               

               
Cow position:
               
chr3:6265421-6265218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
303-497
               

               
Cow position:
               
chr3:9843496-9843294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
303-497
               

               
Cow position:
               
chr3:11640342-11640144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
29, 81
               

               
Conread position:
               
303-497
               

               
Cow position:
               
chr3:27544424-27544619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
48, 27
               

               
Conread position:
               
303-497
               

               
Cow position:
               
chr3:48241525-48241331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
159, 77
               

               
Conread position:
               
303-497
               

               
Cow position:
               
chr3:58540618-58540820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
303-497
               

               
Cow position:
               
chr3:59271449-59271269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
303-497
               

               
Cow position:
               
chr3:78894414-78894604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
160, 74
               

               
Conread position:
               
303-497
               

               
Cow position:
               
chr3:78945926-78946129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr3:5365586-5365395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
159, 62
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr3:12675125-12675331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr3:14626248-14626441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
52, 95
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr3:22872138-22872343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr3:45312959-45312763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
48, 82
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr3:65020245-65020043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr3:7858277-7858060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr3:8717161-8716955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
47, 150
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr3:13517250-13517447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
51, 95
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr3:15080837-15081031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
159, 30
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr3:16004081-16004278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
107, 94
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr3:18279520-18279724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr3:25691663-25691457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr3:26894570-26894376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
86, 106
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr3:39328304-39328120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 75
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr3:46160936-46161137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
47, 27
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr3:52017677-52017468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr3:53113082-53112876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr3:72019026-72018831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
47, 94
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr3:77276498-77276696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
91, 47
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr3:81940165-81939959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
303-500
               

               
Cow position:
               
chr3:15661791-15661994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
52, 82
               

               
Conread position:
               
303-500
               

               
Cow position:
               
chr3:43528334-43528530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
86, 30
               

               
Conread position:
               
303-500
               

               
Cow position:
               
chr3:53904088-53903893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
102, 19
               

               
Conread position:
               
303-500
               

               
Cow position:
               
chr3:59366463-59366254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
303-504
               

               
Cow position:
               
chr3:364303-364516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
303-506
               

               
Cow position:
               
chr3:19198584-19198383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
84, 42
               

               
Conread position:
               
303-508
               

               
Cow position:
               
chr3:72322-72114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
303-509
               

               
Cow position:
               
chr3:4031879-4031664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
303-510
               

               
Cow position:
               
chr3:24351033-24350825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
159, 79
               

               
Conread position:
               
303-510
               

               
Cow position:
               
chr3:45524175-45523960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 103
               

               
Conread position:
               
303-515
               

               
Cow position:
               
chr3:58383875-58383659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
86, 9
               

               
Conread position:
               
303-518
               

               
Cow position:
               
chr3:42178067-42177850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
52, 63
               

               
Conread position:
               
303-521
               

               
Cow position:
               
chr3:17952565-17952339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
303-521
               

               
Cow position:
               
chr3:49218405-49218624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 106
               

               
Conread position:
               
303-521
               

               
Cow position:
               
chr3:71430298-71430520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
54, 166
               

               
Conread position:
               
303-547
               

               
Cow position:
               
chr3:56704635-56704875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
159, 94
               

               
Conread position:
               
304-449
               

               
Cow position:
               
chr3:80922477-80922329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
304-473
               

               
Cow position:
               
chr3:59701917-59701747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 76
               

               
Conread position:
               
304-477
               

               
Cow position:
               
chr3:35283186-35283367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
304-483
               

               
Cow position:
               
chr3:32399347-32399531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
304-486
               

               
Cow position:
               
chr3:49731733-49731916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
51, 62
               

               
Conread position:
               
304-487
               

               
Cow position:
               
chr3:42489398-42489586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
25, 142
               

               
Conread position:
               
304-487
               

               
Cow position:
               
chr3:63860983-63861181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
304-488
               

               
Cow position:
               
chr3:22171095-22170908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
304-488
               

               
Cow position:
               
chr3:26493313-26493505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
304-488
               

               
Cow position:
               
chr3:32597019-32597209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
304-490
               

               
Cow position:
               
chr3:60892531-60892350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
82, 39
               

               
Conread position:
               
304-491
               

               
Cow position:
               
chr3:8457562-8457373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
304-491
               

               
Cow position:
               
chr3:68583094-68583286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
304-492
               

               
Cow position:
               
chr3:59206153-59205956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
304-495
               

               
Cow position:
               
chr3:7678576-7678385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
51, 92
               

               
Conread position:
               
304-495
               

               
Cow position:
               
chr3:16157593-16157393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
52, 35
               

               
Conread position:
               
304-495
               

               
Cow position:
               
chr3:27532749-27532950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
304-495
               

               
Cow position:
               
chr3:48371043-48370843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
304-496
               

               
Cow position:
               
chr3:23277634-23277834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
304-496
               

               
Cow position:
               
chr3:69961806-69962000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
158, 81
               

               
Conread position:
               
304-497
               

               
Cow position:
               
chr3:8147760-8147953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
51, 92
               

               
Conread position:
               
304-497
               

               
Cow position:
               
chr3:13329870-13330062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
160, 76
               

               
Conread position:
               
304-497
               

               
Cow position:
               
chr3:14263302-14263102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
304-497
               

               
Cow position:
               
chr3:28675897-28675699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
304-497
               

               
Cow position:
               
chr3:38497851-38497662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
304-497
               

               
Cow position:
               
chr3:51255696-51255494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
304-497
               

               
Cow position:
               
chr3:59630594-59630790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
158, 74
               

               
Conread position:
               
304-498
               

               
Cow position:
               
chr3:20471455-20471647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
51, 25
               

               
Conread position:
               
304-498
               

               
Cow position:
               
chr3:34270823-34270640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
304-498
               

               
Cow position:
               
chr3:42423425-42423622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
51, 79
               

               
Conread position:
               
304-498
               

               
Cow position:
               
chr3:42480524-42480333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
304-498
               

               
Cow position:
               
chr3:45648040-45647846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
158, 60
               

               
Conread position:
               
304-498
               

               
Cow position:
               
chr3:51609729-51609525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
304-498
               

               
Cow position:
               
chr3:55085269-55085475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
304-498
               

               
Cow position:
               
chr3:58865551-58865750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr3:2483354-2483161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
50, 78
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr3:4332276-4332066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr3:11026829-11026634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
13, 62
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr3:14725210-14725005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr3:27286140-27285933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr3:33632984-33633178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 40
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr3:41367078-41367275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
85, 43
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr3:42461609-42461408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr3:48629685-48629878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 67
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr3:49455146-49454940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr3:49787323-49787118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
51, 176
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr3:52147762-52147968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
46, 30
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr3:54960096-54959899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
51, 31
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr3:59588427-59588227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
54, 18
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr3:61171597-61171794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 163
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr3:61361314-61361122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 96
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr3:61678602-61678399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr3:66738686-66738481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr3:68342345-68342546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr3:69344909-69345110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
50, 148
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr3:81471187-81471392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
304-500
               

               
Cow position:
               
chr3:30358727-30358927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
304-500
               

               
Cow position:
               
chr3:75727676-75727882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
304-502
               

               
Cow position:
               
chr3:4457165-4457371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 26
               

               
Conread position:
               
304-510
               

               
Cow position:
               
chr3:6689909-6689689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
54, 212
               

               
Conread position:
               
304-518
               

               
Cow position:
               
chr3:33327613-33327397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
25, 199
               

               
Conread position:
               
304-521
               

               
Cow position:
               
chr3:66708163-66708389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
25, 217
               

               
Conread position:
               
305-457
               

               
Cow position:
               
chr3:12563385-12563231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
305-458
               

               
Cow position:
               
chr3:55947489-55947327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
305-472
               

               
Cow position:
               
chr3:44534853-44535028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 167
               

               
Conread position:
               
305-472
               

               
Cow position:
               
chr3:55971133-55970960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
305-487
               

               
Cow position:
               
chr3:18607279-18607088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
84, 29
               

               
Conread position:
               
305-495
               

               
Cow position:
               
chr3:35975200-35975393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
305-497
               

               
Cow position:
               
chr3:44861396-44861598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
305-497
               

               
Cow position:
               
chr3:55815245-55815054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
157, 15
               

               
Conread position:
               
305-499
               

               
Cow position:
               
chr3:11020028-11019826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
49, 121
               

               
Conread position:
               
305-499
               

               
Cow position:
               
chr3:82461085-82460891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
50, 77
               

               
Conread position:
               
306-425
               

               
Cow position:
               
chr3:5082732-5082857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
306-499
               

               
Cow position:
               
chr3:36656863-36657062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
306-499
               

               
Cow position:
               
chr3:62623743-62623925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
150, 44
               

               
Conread position:
               
306-499
               

               
Cow position:
               
chr3:80081917-80082109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
156, 75
               

               
Conread position:
               
306-518
               

               
Cow position:
               
chr3:69849601-69849816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
154, 44
               

               
Conread position:
               
308-488
               

               
Cow position:
               
chr3:55460591-55460782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
309-483
               

               
Cow position:
               
chr3:47284742-47284562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
309-497
               

               
Cow position:
               
chr3:23945002-23944807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 42
               

               
Conread position:
               
309-498
               

               
Cow position:
               
chr3:42594750-42594947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
309-499
               

               
Cow position:
               
chr3:522612-522433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 52
               

               
Conread position:
               
309-499
               

               
Cow position:
               
chr3:8556882-8557073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
92, 99
               

               
Conread position:
               
309-499
               

               
Cow position:
               
chr3:12287136-12286943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
74, 23
               

               
Conread position:
               
309-499
               

               
Cow position:
               
chr3:36672087-36672297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
309-499
               

               
Cow position:
               
chr3:59451494-59451303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
309-499
               

               
Cow position:
               
chr3:78201174-78200975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
309-503
               

               
Cow position:
               
chr3:55445267-55445072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 136
               

               
Conread position:
               
309-510
               

               
Cow position:
               
chr3:31501254-31501048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
80, 159
               

               
Conread position:
               
309-510
               

               
Cow position:
               
chr3:80655355-80655157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 23
               

               
Conread position:
               
309-515
               

               
Cow position:
               
chr3:18763801-18763584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
310-483
               

               
Cow position:
               
chr3:5899723-5899550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
152, 72
               

               
Conread position:
               
311-545
               

               
Cow position:
               
chr3:73956929-73956689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 28
               

               
Conread position:
               
312-486
               

               
Cow position:
               
chr3:42483801-42483621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
312-491
               

               
Cow position:
               
chr3:20155730-20155546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
312-492
               

               
Cow position:
               
chr3:49230917-49230730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 167
               

               
Conread position:
               
312-495
               

               
Cow position:
               
chr3:62611806-62611624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
312-498
               

               
Cow position:
               
chr3:53222739-53222933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
312-499
               

               
Cow position:
               
chr3:7408388-7408191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
312-499
               

               
Cow position:
               
chr3:35299566-35299382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 67
               

               
Conread position:
               
312-499
               

               
Cow position:
               
chr3:64716924-64716731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
312-499
               

               
Cow position:
               
chr3:77496721-77496525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
313-499
               

               
Cow position:
               
chr3:5495596-5495789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
314-497
               

               
Cow position:
               
chr3:59333670-59333485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
35, 143
               

               
Conread position:
               
314-498
               

               
Cow position:
               
chr3:14280745-14280553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
38, 98
               

               
Conread position:
               
314-499
               

               
Cow position:
               
chr3:79905020-79905204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
37, 124
               

               
Conread position:
               
314-510
               

               
Cow position:
               
chr3:23735201-23735408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
40, 78
               

               
Conread position:
               
315-499
               

               
Cow position:
               
chr3:24639490-24639298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
315-499
               

               
Cow position:
               
chr3:83988384-83988189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
316-466
               

               
Cow position:
               
chr3:56523607-56523757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
68, 107
               

               
Conread position:
               
316-486
               

               
Cow position:
               
chr3:82056220-82056396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
316-495
               

               
Cow position:
               
chr3:67044201-67044383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
316-497
               

               
Cow position:
               
chr3:78546197-78546383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
16, 160
               

               
Conread position:
               
318-434
               

               
Cow position:
               
chr3:53084064-53084176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
318-483
               

               
Cow position:
               
chr3:48923617-48923789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 39
               

               
Conread position:
               
318-486
               

               
Cow position:
               
chr3:61262698-61262524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
318-489
               

               
Cow position:
               
chr3:50763023-50762843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
318-494
               

               
Cow position:
               
chr3:33693544-33693362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
68, 29
               

               
Conread position:
               
318-497
               

               
Cow position:
               
chr3:58158569-58158754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
318-499
               

               
Cow position:
               
chr3:21302539-21302723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
318-499
               

               
Cow position:
               
chr3:75143137-75143324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
318-499
               

               
Cow position:
               
chr3:83921097-83920906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
319-510
               

               
Cow position:
               
chr3:12979420-12979222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 189
               

               
Conread position:
               
320-495
               

               
Cow position:
               
chr3:45690980-45691153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
320-497
               

               
Cow position:
               
chr3:58951513-58951331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
321-499
               

               
Cow position:
               
chr3:48900612-48900794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
322-431
               

               
Cow position:
               
chr3:45221811-45221921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 86
               

               
Conread position:
               
322-460
               

               
Cow position:
               
chr3:18471040-18471175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 47
               

               
Conread position:
               
322-477
               

               
Cow position:
               
chr3:84368482-84368639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 77
               

               
Conread position:
               
322-499
               

               
Cow position:
               
chr3:22907941-22908126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
322-502
               

               
Cow position:
               
chr3:12670806-12670988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
145, 24
               

               
Conread position:
               
323-498
               

               
Cow position:
               
chr3:49388730-49388551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
12, 56
               

               
Conread position:
               
331-495
               

               
Cow position:
               
chr3:76092167-76091998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
58, 16
               

               
Conread position:
               
333-499
               

               
Cow position:
               
chr3:28357715-28357891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
333-520
               

               
Cow position:
               
chr3:40231813-40231615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
334-494
               

               
Cow position:
               
chr3:8901297-8901134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 74
               

               
Conread position:
               
334-496
               

               
Cow position:
               
chr3:9116781-9116618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
127, 64
               

               
Conread position:
               
334-499
               

               
Cow position:
               
chr3:27242640-27242811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
20, 134
               

               
Conread position:
               
335-495
               

               
Cow position:
               
chr3:45333721-45333888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
335-499
               

               
Cow position:
               
chr3:68514682-68514841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
126, 41
               

               
Conread position:
               
338-497
               

               
Cow position:
               
chr3:51033221-51033055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
338-497
               

               
Cow position:
               
chr3:66964423-66964583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
44, 89
               

               
Conread position:
               
338-498
               

               
Cow position:
               
chr3:50099364-50099202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
339-479
               

               
Cow position:
               
chr3:31276225-31276376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
339-497
               

               
Cow position:
               
chr3:32870020-32869859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
342-498
               

               
Cow position:
               
chr3:78093800-78093951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
66, 44
               

               
Conread position:
               
347-496
               

               
Cow position:
               
chr3:59179274-59179117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
347-498
               

               
Cow position:
               
chr3:60389500-60389353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
347-499
               

               
Cow position:
               
chr3:58286033-58286190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
347-523
               

               
Cow position:
               
chr3:52484486-52484310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 95
               

               
Conread position:
               
348-497
               

               
Cow position:
               
chr3:58135171-58135324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
349-518
               

               
Cow position:
               
chr3:11276854-11277024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
98, 48
               

               
Conread position:
               
350-481
               

               
Cow position:
               
chr3:75164049-75164184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
49, 67
               

               
Conread position:
               
350-494
               

               
Cow position:
               
chr3:54909426-54909277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
350-495
               

               
Cow position:
               
chr3:15079206-15079356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
350-495
               

               
Cow position:
               
chr3:16886015-16886167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
350-495
               

               
Cow position:
               
chr3:47737027-47737174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
350-496
               

               
Cow position:
               
chr3:26835934-26836079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
118, 69
               

               
Conread position:
               
350-498
               

               
Cow position:
               
chr3:70754231-70754074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
350-499
               

               
Cow position:
               
chr3:6403158-6403005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
350-499
               

               
Cow position:
               
chr3:31903252-31903400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 59
               

               
Conread position:
               
350-499
               

               
Cow position:
               
chr3:50329213-50329367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
350-499
               

               
Cow position:
               
chr3:66978705-66978551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
350-499
               

               
Cow position:
               
chr3:79271935-79272080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
104, 33
               

               
Conread position:
               
350-504
               

               
Cow position:
               
chr3:83698077-83698233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
354-477
               

               
Cow position:
               
chr3:9638736-9638863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 53
               

               
Conread position:
               
354-499
               

               
Cow position:
               
chr3:18887443-18887287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
354-521
               

               
Cow position:
               
chr3:57022428-57022261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
108, 27
               

               
Conread position:
               
355-488
               

               
Cow position:
               
chr3:30907778-30907916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
36, 86
               

               
Conread position:
               
356-499
               

               
Cow position:
               
chr3:42671178-42671029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
356-499
               

               
Cow position:
               
chr3:45183992-45184137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
32, 46
               

               
Conread position:
               
357-498
               

               
Cow position:
               
chr3:17331621-17331477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
8, 27
               

               
Conread position:
               
360-501
               

               
Cow position:
               
chr3:62789348-62789498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
364-498
               

               
Cow position:
               
chr3:44623052-44623188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
25, 44
               

               
Conread position:
               
364-499
               

               
Cow position:
               
chr3:29172228-29172091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
96, 18
               

               
Conread position:
               
365-499
               

               
Cow position:
               
chr3:41053660-41053522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
31, 102
               

               
Conread position:
               
369-489
               

               
Cow position:
               
chr3:59040284-59040161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
376-499
               

               
Cow position:
               
chr3:76614474-76614350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
84, 21
               

               
Conread position:
               
376-518
               

               
Cow position:
               
chr3:2335115-2334974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
380-498
               

               
Cow position:
               
chr3:66014236-66014114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
381-496
               

               
Cow position:
               
chr3:18700368-18700487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
381-516
               

               
Cow position:
               
chr3:83437274-83437409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 22
               

               
Conread position:
               
385-498
               

               
Cow position:
               
chr3:53508202-53508089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
385-520
               

               
Cow position:
               
chr3:15549315-15549179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
100, 72
               

               
Conread position:
               
386-499
               

               
Cow position:
               
chr3:83728051-83728162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
387-499
               

               
Cow position:
               
chr3:3884204-3884318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
387-521
               

               
Cow position:
               
chr3:76155534-76155398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
113, 75
               

               
Conread position:
               
390-499
               

               
Cow position:
               
chr3:69766417-69766528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               
Show alignments to all cow chromosomes.