• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8023L17.3
        

               
Conread position:
               
1-487
               

               
Cow position:
               
chr4:36395884-36396388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
9, 151
               

               
Conread position:
               
1-491
               

               
Cow position:
               
chr4:10915593-10916105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 60
               

               
Conread position:
               
3-490
               

               
Cow position:
               
chr4:3283218-3283716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 120
               

               
Conread position:
               
5-222
               

               
Cow position:
               
chr4:28660315-28660533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
112, 30
               

               
Conread position:
               
5-492
               

               
Cow position:
               
chr4:14414127-14414611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
280, 7
               

               
Conread position:
               
6-500
               

               
Cow position:
               
chr4:51903840-51903325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
7-498
               

               
Cow position:
               
chr4:59785553-59785041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 120
               

               
Conread position:
               
8-481
               

               
Cow position:
               
chr4:13872148-13871676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
132, 36
               

               
Conread position:
               
9-493
               

               
Cow position:
               
chr4:33623943-33623448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
31, 58
               

               
Conread position:
               
10-243
               

               
Cow position:
               
chr4:37991816-37991589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
10-277
               

               
Cow position:
               
chr4:47305309-47305040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
21, 49
               

               
Conread position:
               
11-431
               

               
Cow position:
               
chr4:51769331-51768907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
103, 47
               

               
Conread position:
               
12-273
               

               
Cow position:
               
chr4:44854057-44854323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
12-489
               

               
Cow position:
               
chr4:4320767-4321272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 5
               

               
Conread position:
               
12-499
               

               
Cow position:
               
chr4:55270540-55271035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
133, 320
               

               
Conread position:
               
13-507
               

               
Cow position:
               
chr4:352460-351945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
131, 9
               

               
Conread position:
               
14-306
               

               
Cow position:
               
chr4:48423087-48422810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
265, 35
               

               
Conread position:
               
15-428
               

               
Cow position:
               
chr4:28839837-28839423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
16-434
               

               
Cow position:
               
chr4:31859493-31859053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 150
               

               
Conread position:
               
16-498
               

               
Cow position:
               
chr4:2681546-2681090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
133, 24
               

               
Conread position:
               
16-499
               

               
Cow position:
               
chr4:7964425-7964927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
26, 43
               

               
Conread position:
               
17-487
               

               
Cow position:
               
chr4:23526926-23526433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
59, 29
               

               
Conread position:
               
18-306
               

               
Cow position:
               
chr4:69290524-69290804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
18-387
               

               
Cow position:
               
chr4:2099853-2099474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 66
               

               
Conread position:
               
18-499
               

               
Cow position:
               
chr4:9795156-9795647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
57, 128
               

               
Conread position:
               
19-520
               

               
Cow position:
               
chr4:41867663-41867148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
20-499
               

               
Cow position:
               
chr4:4084891-4085412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 38
               

               
Conread position:
               
20-499
               

               
Cow position:
               
chr4:51899239-51898726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 168
               

               
Conread position:
               
21-437
               

               
Cow position:
               
chr4:48322252-48321817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
21-487
               

               
Cow position:
               
chr4:19315790-19316261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 121
               

               
Conread position:
               
21-499
               

               
Cow position:
               
chr4:2894252-2893748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 24
               

               
Conread position:
               
21-499
               

               
Cow position:
               
chr4:17832678-17833181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
22-239
               

               
Cow position:
               
chr4:42373939-42374155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
22-284
               

               
Cow position:
               
chr4:18952189-18951928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
84, 21
               

               
Conread position:
               
22-339
               

               
Cow position:
               
chr4:28841634-28841317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
101, 36
               

               
Conread position:
               
23-497
               

               
Cow position:
               
chr4:9137500-9137003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
125, 35
               

               
Conread position:
               
23-498
               

               
Cow position:
               
chr4:42673390-42672896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 22
               

               
Conread position:
               
23-499
               

               
Cow position:
               
chr4:33910470-33910031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
169, 36
               

               
Conread position:
               
24-383
               

               
Cow position:
               
chr4:19119228-19118851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
251, 19
               

               
Conread position:
               
24-480
               

               
Cow position:
               
chr4:50203972-50203490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 121
               

               
Conread position:
               
24-481
               

               
Cow position:
               
chr4:54455131-54455598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 112
               

               
Conread position:
               
24-499
               

               
Cow position:
               
chr4:23450879-23451372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 17
               

               
Conread position:
               
25-387
               

               
Cow position:
               
chr4:36290837-36290469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
24, 97
               

               
Conread position:
               
25-446
               

               
Cow position:
               
chr4:59277267-59277700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 24
               

               
Conread position:
               
25-488
               

               
Cow position:
               
chr4:14504834-14505265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
25-488
               

               
Cow position:
               
chr4:35982205-35981724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 17
               

               
Conread position:
               
25-492
               

               
Cow position:
               
chr4:4318943-4319411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
90, 27
               

               
Conread position:
               
25-493
               

               
Cow position:
               
chr4:22546629-22547069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
27, 96
               

               
Conread position:
               
25-497
               

               
Cow position:
               
chr4:28771857-28772341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 42
               

               
Conread position:
               
25-498
               

               
Cow position:
               
chr4:52748252-52748733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 17
               

               
Conread position:
               
25-499
               

               
Cow position:
               
chr4:7847061-7847543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
47, 38
               

               
Conread position:
               
25-510
               

               
Cow position:
               
chr4:40414417-40414920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 26
               

               
Conread position:
               
26-261
               

               
Cow position:
               
chr4:33838589-33838821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
26-394
               

               
Cow position:
               
chr4:34077159-34076790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
205, 30
               

               
Conread position:
               
26-423
               

               
Cow position:
               
chr4:17774153-17774547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
249, 74
               

               
Conread position:
               
26-498
               

               
Cow position:
               
chr4:7430516-7430044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
26-521
               

               
Cow position:
               
chr4:58248613-58248110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 37
               

               
Conread position:
               
26-555
               

               
Cow position:
               
chr4:59871691-59871167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 31
               

               
Conread position:
               
27-271
               

               
Cow position:
               
chr4:19333592-19333355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
27-425
               

               
Cow position:
               
chr4:38944048-38944464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
250, 31
               

               
Conread position:
               
27-425
               

               
Cow position:
               
chr4:68806215-68805828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
26, 88
               

               
Conread position:
               
27-456
               

               
Cow position:
               
chr4:25356121-25356536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 19
               

               
Conread position:
               
27-499
               

               
Cow position:
               
chr4:7286-7774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
97, 31
               

               
Conread position:
               
28-426
               

               
Cow position:
               
chr4:85904-85495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
135, 99
               

               
Conread position:
               
28-466
               

               
Cow position:
               
chr4:27665227-27664765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
28-491
               

               
Cow position:
               
chr4:570998-570532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
213, 75
               

               
Conread position:
               
28-495
               

               
Cow position:
               
chr4:53126314-53125867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
57, 31
               

               
Conread position:
               
28-499
               

               
Cow position:
               
chr4:1015281-1014791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
124, 114
               

               
Conread position:
               
28-499
               

               
Cow position:
               
chr4:19265787-19265297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 119
               

               
Conread position:
               
29-285
               

               
Cow position:
               
chr4:59001932-59002184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
29-291
               

               
Cow position:
               
chr4:19431482-19431748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
98, 29
               

               
Conread position:
               
29-482
               

               
Cow position:
               
chr4:11099454-11099924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
188, 14
               

               
Conread position:
               
29-495
               

               
Cow position:
               
chr4:19238426-19237967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
96, 29
               

               
Conread position:
               
29-518
               

               
Cow position:
               
chr4:15871533-15872016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
129, 29
               

               
Conread position:
               
30-272
               

               
Cow position:
               
chr4:34983289-34983528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
18, 96
               

               
Conread position:
               
30-306
               

               
Cow position:
               
chr4:17851056-17851318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
30-307
               

               
Cow position:
               
chr4:8182429-8182706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
56, 13
               

               
Conread position:
               
30-375
               

               
Cow position:
               
chr4:20026894-20027248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
30-489
               

               
Cow position:
               
chr4:23846846-23847317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
30-493
               

               
Cow position:
               
chr4:3688138-3687658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 108
               

               
Conread position:
               
30-498
               

               
Cow position:
               
chr4:18974637-18974162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 119
               

               
Conread position:
               
30-499
               

               
Cow position:
               
chr4:68076334-68076804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
116, 12
               

               
Conread position:
               
30-500
               

               
Cow position:
               
chr4:23646660-23647120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 99
               

               
Conread position:
               
30-524
               

               
Cow position:
               
chr4:22138012-22138539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 12
               

               
Conread position:
               
31-260
               

               
Cow position:
               
chr4:60527388-60527160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
31-495
               

               
Cow position:
               
chr4:49813474-49813935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
68, 25
               

               
Conread position:
               
32-204
               

               
Cow position:
               
chr4:22215306-22215475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 89
               

               
Conread position:
               
32-296
               

               
Cow position:
               
chr4:13241842-13241570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
78, 19
               

               
Conread position:
               
32-454
               

               
Cow position:
               
chr4:11004528-11004947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
108, 88
               

               
Conread position:
               
32-498
               

               
Cow position:
               
chr4:31023657-31023170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
5, 29
               

               
Conread position:
               
32-498
               

               
Cow position:
               
chr4:66547555-66548031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
20, 145
               

               
Conread position:
               
32-516
               

               
Cow position:
               
chr4:51851418-51850904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 103
               

               
Conread position:
               
32-521
               

               
Cow position:
               
chr4:30778615-30779136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
109, 20
               

               
Conread position:
               
33-293
               

               
Cow position:
               
chr4:38209768-38210030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
33-488
               

               
Cow position:
               
chr4:3341161-3340686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
33-495
               

               
Cow position:
               
chr4:27276344-27276813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
82, 18
               

               
Conread position:
               
33-521
               

               
Cow position:
               
chr4:49212542-49213020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
7, 70
               

               
Conread position:
               
34-285
               

               
Cow position:
               
chr4:68590972-68590733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
34-304
               

               
Cow position:
               
chr4:38156888-38157154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
8, 80
               

               
Conread position:
               
34-499
               

               
Cow position:
               
chr4:36841465-36841001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
355, 31
               

               
Conread position:
               
35-206
               

               
Cow position:
               
chr4:61524633-61524466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 24
               

               
Conread position:
               
35-498
               

               
Cow position:
               
chr4:23509791-23509310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 16
               

               
Conread position:
               
35-498
               

               
Cow position:
               
chr4:59055668-59056114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
195, 48
               

               
Conread position:
               
35-499
               

               
Cow position:
               
chr4:51728274-51727807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 10
               

               
Conread position:
               
36-490
               

               
Cow position:
               
chr4:65919819-65919351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 22
               

               
Conread position:
               
37-240
               

               
Cow position:
               
chr4:61887840-61887636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
37-261
               

               
Cow position:
               
chr4:18098861-18099083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
37-296
               

               
Cow position:
               
chr4:12442107-12441840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
37-307
               

               
Cow position:
               
chr4:46566270-46566540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
211, 42
               

               
Conread position:
               
37-377
               

               
Cow position:
               
chr4:48409085-48409415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
226, 21
               

               
Conread position:
               
37-487
               

               
Cow position:
               
chr4:10968196-10968649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
248, 45
               

               
Conread position:
               
37-487
               

               
Cow position:
               
chr4:37691108-37691572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
37-489
               

               
Cow position:
               
chr4:19745070-19744623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
52, 21
               

               
Conread position:
               
37-491
               

               
Cow position:
               
chr4:19542351-19541858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
83, 198
               

               
Conread position:
               
37-496
               

               
Cow position:
               
chr4:19584914-19584431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
48, 21
               

               
Conread position:
               
37-498
               

               
Cow position:
               
chr4:38329999-38330480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
37-498
               

               
Cow position:
               
chr4:56239664-56240120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 21
               

               
Conread position:
               
37-499
               

               
Cow position:
               
chr4:20327522-20327991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 30
               

               
Conread position:
               
37-500
               

               
Cow position:
               
chr4:29291705-29291245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 9
               

               
Conread position:
               
37-510
               

               
Cow position:
               
chr4:4084256-4084733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 78
               

               
Conread position:
               
37-518
               

               
Cow position:
               
chr4:66256879-66256388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
140, 21
               

               
Conread position:
               
38-292
               

               
Cow position:
               
chr4:65173303-65173049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
8, 95
               

               
Conread position:
               
38-379
               

               
Cow position:
               
chr4:54927230-54927591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
38-495
               

               
Cow position:
               
chr4:11187654-11187185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
21, 95
               

               
Conread position:
               
38-498
               

               
Cow position:
               
chr4:22073117-22073584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
75, 136
               

               
Conread position:
               
38-499
               

               
Cow position:
               
chr4:13668419-13668892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
121, 20
               

               
Conread position:
               
39-497
               

               
Cow position:
               
chr4:66172595-66173071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
40-458
               

               
Cow position:
               
chr4:13693476-13693910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 82
               

               
Conread position:
               
40-521
               

               
Cow position:
               
chr4:61391037-61391501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
348, 18
               

               
Conread position:
               
43-354
               

               
Cow position:
               
chr4:65463319-65463611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
267, 15
               

               
Conread position:
               
43-431
               

               
Cow position:
               
chr4:34022390-34022787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 69
               

               
Conread position:
               
43-451
               

               
Cow position:
               
chr4:24810257-24810672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
43-494
               

               
Cow position:
               
chr4:202948-203419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
88, 45
               

               
Conread position:
               
43-499
               

               
Cow position:
               
chr4:19435444-19434985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 33
               

               
Conread position:
               
43-525
               

               
Cow position:
               
chr4:54938074-54937585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
131, 15
               

               
Conread position:
               
43-535
               

               
Cow position:
               
chr4:34310271-34310767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
108, 15
               

               
Conread position:
               
44-487
               

               
Cow position:
               
chr4:49158598-49159044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 76
               

               
Conread position:
               
44-499
               

               
Cow position:
               
chr4:10732415-10731943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 84
               

               
Conread position:
               
45-251
               

               
Cow position:
               
chr4:13995582-13995376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
16, 166
               

               
Conread position:
               
46-260
               

               
Cow position:
               
chr4:43916485-43916268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
46-280
               

               
Cow position:
               
chr4:10558728-10558496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
7, 13
               

               
Conread position:
               
46-307
               

               
Cow position:
               
chr4:34510020-34509772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
236, 12
               

               
Conread position:
               
46-314
               

               
Cow position:
               
chr4:46435526-46435252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
68, 259
               

               
Conread position:
               
46-320
               

               
Cow position:
               
chr4:60719284-60719021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
59, 38
               

               
Conread position:
               
46-458
               

               
Cow position:
               
chr4:4186308-4185889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
46-466
               

               
Cow position:
               
chr4:26659491-26659065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 12
               

               
Conread position:
               
46-477
               

               
Cow position:
               
chr4:12676987-12676559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
257, 82
               

               
Conread position:
               
46-480
               

               
Cow position:
               
chr4:45582930-45583385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
258, 39
               

               
Conread position:
               
46-481
               

               
Cow position:
               
chr4:49794842-49794421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 68
               

               
Conread position:
               
46-483
               

               
Cow position:
               
chr4:62983366-62983813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
98, 74
               

               
Conread position:
               
46-488
               

               
Cow position:
               
chr4:34641531-34641994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 117
               

               
Conread position:
               
46-489
               

               
Cow position:
               
chr4:19700299-19699833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 174
               

               
Conread position:
               
46-489
               

               
Cow position:
               
chr4:34631098-34630636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 12
               

               
Conread position:
               
46-495
               

               
Cow position:
               
chr4:15905298-15904826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
46-495
               

               
Cow position:
               
chr4:30974525-30974065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
112, 12
               

               
Conread position:
               
46-495
               

               
Cow position:
               
chr4:46061139-46060674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
46-495
               

               
Cow position:
               
chr4:49629677-49629225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
46-495
               

               
Cow position:
               
chr4:53134788-53134339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 14
               

               
Conread position:
               
46-497
               

               
Cow position:
               
chr4:48152179-48152643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
46-498
               

               
Cow position:
               
chr4:3388734-3388277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
105, 35
               

               
Conread position:
               
46-499
               

               
Cow position:
               
chr4:12591028-12591487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 12
               

               
Conread position:
               
46-503
               

               
Cow position:
               
chr4:21065217-21064759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 69
               

               
Conread position:
               
46-516
               

               
Cow position:
               
chr4:31136947-31136462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 89
               

               
Conread position:
               
47-429
               

               
Cow position:
               
chr4:13344727-13344338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
51-486
               

               
Cow position:
               
chr4:31004225-31004667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
255, 59
               

               
Conread position:
               
51-499
               

               
Cow position:
               
chr4:37915151-37915605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 69
               

               
Conread position:
               
52-254
               

               
Cow position:
               
chr4:41907397-41907596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
52-265
               

               
Cow position:
               
chr4:34653689-34653894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
52-281
               

               
Cow position:
               
chr4:11969639-11969415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
52-359
               

               
Cow position:
               
chr4:52831830-52832149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 6
               

               
Conread position:
               
52-419
               

               
Cow position:
               
chr4:17186163-17186544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
34, 6
               

               
Conread position:
               
52-431
               

               
Cow position:
               
chr4:1026053-1026434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 6
               

               
Conread position:
               
52-433
               

               
Cow position:
               
chr4:19407806-19408206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
60, 6
               

               
Conread position:
               
52-442
               

               
Cow position:
               
chr4:38935543-38935142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 6
               

               
Conread position:
               
52-491
               

               
Cow position:
               
chr4:13590272-13589823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 8
               

               
Conread position:
               
52-496
               

               
Cow position:
               
chr4:25370279-25369843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
248, 6
               

               
Conread position:
               
52-497
               

               
Cow position:
               
chr4:48486181-48485719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 6
               

               
Conread position:
               
52-499
               

               
Cow position:
               
chr4:3421809-3421370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 6
               

               
Conread position:
               
52-499
               

               
Cow position:
               
chr4:19597147-19597589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 6
               

               
Conread position:
               
52-518
               

               
Cow position:
               
chr4:53208468-53208006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 7
               

               
Conread position:
               
52-521
               

               
Cow position:
               
chr4:508727-509199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
250, 6
               

               
Conread position:
               
54-499
               

               
Cow position:
               
chr4:11309815-11309350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
58, 5
               

               
Conread position:
               
57-477
               

               
Cow position:
               
chr4:19709124-19708687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
100, 114
               

               
Conread position:
               
57-497
               

               
Cow position:
               
chr4:46383184-46383645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 109
               

               
Conread position:
               
57-499
               

               
Cow position:
               
chr4:9444501-9444965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
57, 93
               

               
Conread position:
               
58-320
               

               
Cow position:
               
chr4:19102696-19102963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 199
               

               
Conread position:
               
58-481
               

               
Cow position:
               
chr4:47731044-47730604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 45
               

               
Conread position:
               
58-489
               

               
Cow position:
               
chr4:21874358-21873934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 255
               

               
Conread position:
               
58-495
               

               
Cow position:
               
chr4:19097470-19097020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 9
               

               
Conread position:
               
58-498
               

               
Cow position:
               
chr4:68234143-68233704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 20
               

               
Conread position:
               
58-499
               

               
Cow position:
               
chr4:43148595-43148128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
68, 89
               

               
Conread position:
               
59-393
               

               
Cow position:
               
chr4:54478735-54479069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
54, 155
               

               
Conread position:
               
59-466
               

               
Cow position:
               
chr4:21531461-21531881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 152
               

               
Conread position:
               
59-466
               

               
Cow position:
               
chr4:63349296-63349711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
78, 256
               

               
Conread position:
               
59-492
               

               
Cow position:
               
chr4:46550568-46550115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 24
               

               
Conread position:
               
59-497
               

               
Cow position:
               
chr4:26323923-26323465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
110, 395
               

               
Conread position:
               
59-499
               

               
Cow position:
               
chr4:7258251-7258703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
101, 54
               

               
Conread position:
               
59-500
               

               
Cow position:
               
chr4:45775151-45775618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 348
               

               
Conread position:
               
60-497
               

               
Cow position:
               
chr4:66381063-66381522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
20, 61
               

               
Conread position:
               
60-499
               

               
Cow position:
               
chr4:22009884-22010334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 36
               

               
Conread position:
               
60-504
               

               
Cow position:
               
chr4:23444860-23445331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 116
               

               
Conread position:
               
60-507
               

               
Cow position:
               
chr4:33970726-33971180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 69
               

               
Conread position:
               
61-523
               

               
Cow position:
               
chr4:5609914-5610374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
90, 103
               

               
Conread position:
               
65-499
               

               
Cow position:
               
chr4:12004391-12003947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 62
               

               
Conread position:
               
67-425
               

               
Cow position:
               
chr4:29237869-29238242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 83
               

               
Conread position:
               
67-521
               

               
Cow position:
               
chr4:42423634-42424102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 76
               

               
Conread position:
               
71-507
               

               
Cow position:
               
chr4:14743422-14742976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
53, 79
               

               
Conread position:
               
71-510
               

               
Cow position:
               
chr4:28836705-28836243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
98, 60
               

               
Conread position:
               
74-362
               

               
Cow position:
               
chr4:25537714-25537411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
63, 101
               

               
Conread position:
               
74-499
               

               
Cow position:
               
chr4:68387952-68387516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 62
               

               
Conread position:
               
78-498
               

               
Cow position:
               
chr4:39456201-39455779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
84-362
               

               
Cow position:
               
chr4:68889417-68889691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
200, 49
               

               
Conread position:
               
84-469
               

               
Cow position:
               
chr4:6653878-6653491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
84-469
               

               
Cow position:
               
chr4:19549150-19548753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
84-499
               

               
Cow position:
               
chr4:10703530-10703961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
50, 80
               

               
Conread position:
               
84-499
               

               
Cow position:
               
chr4:38999579-38999151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 177
               

               
Conread position:
               
84-510
               

               
Cow position:
               
chr4:46476784-46477227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
32, 199
               

               
Conread position:
               
85-284
               

               
Cow position:
               
chr4:60141371-60141561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
85-479
               

               
Cow position:
               
chr4:62920723-62921113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
195, 43
               

               
Conread position:
               
85-488
               

               
Cow position:
               
chr4:48235783-48235374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 77
               

               
Conread position:
               
85-496
               

               
Cow position:
               
chr4:7571563-7571136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
154, 29
               

               
Conread position:
               
85-497
               

               
Cow position:
               
chr4:27530270-27529839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 29
               

               
Conread position:
               
85-499
               

               
Cow position:
               
chr4:23656131-23655718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
44, 90
               

               
Conread position:
               
86-479
               

               
Cow position:
               
chr4:63964839-63965247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 57
               

               
Conread position:
               
86-499
               

               
Cow position:
               
chr4:45662355-45662776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
57, 90
               

               
Conread position:
               
87-494
               

               
Cow position:
               
chr4:69305779-69305385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
107, 48
               

               
Conread position:
               
89-498
               

               
Cow position:
               
chr4:23600318-23599895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 218
               

               
Conread position:
               
92-497
               

               
Cow position:
               
chr4:46455919-46456321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
59, 130
               

               
Conread position:
               
94-494
               

               
Cow position:
               
chr4:33096841-33097233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
187, 33
               

               
Conread position:
               
102-497
               

               
Cow position:
               
chr4:21391677-21392078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 19
               

               
Conread position:
               
110-304
               

               
Cow position:
               
chr4:44903421-44903221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
152, 98
               

               
Conread position:
               
113-463
               

               
Cow position:
               
chr4:7808696-7808345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
171, 7
               

               
Conread position:
               
114-300
               

               
Cow position:
               
chr4:65131326-65131514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
114-472
               

               
Cow position:
               
chr4:58880838-58881215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
165, 21
               

               
Conread position:
               
114-494
               

               
Cow position:
               
chr4:54191215-54190829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 119
               

               
Conread position:
               
114-537
               

               
Cow position:
               
chr4:19321952-19322392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 292
               

               
Conread position:
               
120-560
               

               
Cow position:
               
chr4:19582500-19582950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 23
               

               
Conread position:
               
122-306
               

               
Cow position:
               
chr4:34503412-34503227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
111, 26
               

               
Conread position:
               
125-497
               

               
Cow position:
               
chr4:638115-637724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
135-495
               

               
Cow position:
               
chr4:33433151-33433530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
149, 282
               

               
Conread position:
               
135-496
               

               
Cow position:
               
chr4:17111769-17112150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 79
               

               
Conread position:
               
136-342
               

               
Cow position:
               
chr4:10851347-10851549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
136-493
               

               
Cow position:
               
chr4:2141839-2141476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
138-306
               

               
Cow position:
               
chr4:61478707-61478536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
138-422
               

               
Cow position:
               
chr4:10379213-10378914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
138-495
               

               
Cow position:
               
chr4:12903923-12903546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 313
               

               
Conread position:
               
138-499
               

               
Cow position:
               
chr4:48961384-48961766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 73
               

               
Conread position:
               
139-493
               

               
Cow position:
               
chr4:65179046-65179401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
14, 127
               

               
Conread position:
               
141-320
               

               
Cow position:
               
chr4:54541539-54541719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
138, 170
               

               
Conread position:
               
141-358
               

               
Cow position:
               
chr4:48396697-48396924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
141-429
               

               
Cow position:
               
chr4:54111840-54111541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
141-460
               

               
Cow position:
               
chr4:61897436-61897773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
141-479
               

               
Cow position:
               
chr4:42921761-42922102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 68
               

               
Conread position:
               
141-484
               

               
Cow position:
               
chr4:63095975-63096336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
137, 221
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr4:11871823-11872188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 127
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr4:45738376-45738758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
118, 224
               

               
Conread position:
               
141-521
               

               
Cow position:
               
chr4:53100900-53100505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 170
               

               
Conread position:
               
142-472
               

               
Cow position:
               
chr4:3837373-3837030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 83
               

               
Conread position:
               
142-499
               

               
Cow position:
               
chr4:36893457-36893077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
54, 50
               

               
Conread position:
               
142-499
               

               
Cow position:
               
chr4:56570904-56570529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
71, 62
               

               
Conread position:
               
142-521
               

               
Cow position:
               
chr4:25879488-25879096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
79, 62
               

               
Conread position:
               
143-491
               

               
Cow position:
               
chr4:22842441-22842080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
55, 12
               

               
Conread position:
               
143-495
               

               
Cow position:
               
chr4:34337176-34337534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 12
               

               
Conread position:
               
144-520
               

               
Cow position:
               
chr4:9846008-9845629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 29
               

               
Conread position:
               
145-480
               

               
Cow position:
               
chr4:25984315-25983970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
42, 130
               

               
Conread position:
               
146-499
               

               
Cow position:
               
chr4:3850645-3850277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
180, 129
               

               
Conread position:
               
146-502
               

               
Cow position:
               
chr4:63459129-63459494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
133, 106
               

               
Conread position:
               
148-310
               

               
Cow position:
               
chr4:42176382-42176541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 74
               

               
Conread position:
               
148-393
               

               
Cow position:
               
chr4:59378001-59377746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
158, 136
               

               
Conread position:
               
148-487
               

               
Cow position:
               
chr4:45644226-45644577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 61
               

               
Conread position:
               
148-487
               

               
Cow position:
               
chr4:55395853-55395504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
146, 21
               

               
Conread position:
               
148-489
               

               
Cow position:
               
chr4:12049338-12048979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
143, 63
               

               
Conread position:
               
148-491
               

               
Cow position:
               
chr4:46591759-46591394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
148-495
               

               
Cow position:
               
chr4:33395606-33395960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
122, 216
               

               
Conread position:
               
148-495
               

               
Cow position:
               
chr4:36731282-36730918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
148-495
               

               
Cow position:
               
chr4:37935193-37935553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 123
               

               
Conread position:
               
148-495
               

               
Cow position:
               
chr4:47348918-47348560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 72
               

               
Conread position:
               
148-497
               

               
Cow position:
               
chr4:3251453-3251810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 162
               

               
Conread position:
               
148-498
               

               
Cow position:
               
chr4:37704357-37703991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
80, 47
               

               
Conread position:
               
148-499
               

               
Cow position:
               
chr4:8413031-8413386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
45, 107
               

               
Conread position:
               
148-499
               

               
Cow position:
               
chr4:11194277-11193906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 63
               

               
Conread position:
               
148-499
               

               
Cow position:
               
chr4:24001875-24002245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
135, 24
               

               
Conread position:
               
148-499
               

               
Cow position:
               
chr4:38952645-38952283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 229
               

               
Conread position:
               
148-499
               

               
Cow position:
               
chr4:44782466-44782098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
136, 82
               

               
Conread position:
               
148-510
               

               
Cow position:
               
chr4:65650042-65650410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
164, 92
               

               
Conread position:
               
149-499
               

               
Cow position:
               
chr4:9815256-9815628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
149-528
               

               
Cow position:
               
chr4:64791932-64791571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
333, 12
               

               
Conread position:
               
150-495
               

               
Cow position:
               
chr4:16601973-16602323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
109, 59
               

               
Conread position:
               
150-499
               

               
Cow position:
               
chr4:21257034-21257405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
154-499
               

               
Cow position:
               
chr4:16799100-16799468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
155-497
               

               
Cow position:
               
chr4:20139432-20139793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 40
               

               
Conread position:
               
159-466
               

               
Cow position:
               
chr4:21232793-21233111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
103, 250
               

               
Conread position:
               
161-487
               

               
Cow position:
               
chr4:40823034-40823379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
161-497
               

               
Cow position:
               
chr4:22344943-22345289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
82, 26
               

               
Conread position:
               
161-546
               

               
Cow position:
               
chr4:45983-45591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
143, 22
               

               
Conread position:
               
166-498
               

               
Cow position:
               
chr4:12561114-12560763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
57, 250
               

               
Conread position:
               
166-499
               

               
Cow position:
               
chr4:23854254-23853928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
245, 101
               

               
Conread position:
               
167-456
               

               
Cow position:
               
chr4:41602922-41602618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
167-499
               

               
Cow position:
               
chr4:44838819-44839161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
22, 13
               

               
Conread position:
               
168-501
               

               
Cow position:
               
chr4:42481255-42480907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
115, 107
               

               
Conread position:
               
168-520
               

               
Cow position:
               
chr4:5460788-5461151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
11, 248
               

               
Conread position:
               
169-499
               

               
Cow position:
               
chr4:25806969-25806623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
133, 5
               

               
Conread position:
               
173-351
               

               
Cow position:
               
chr4:19493622-19493443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
104, 138
               

               
Conread position:
               
173-521
               

               
Cow position:
               
chr4:68362988-68362639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
119, 40
               

               
Conread position:
               
174-362
               

               
Cow position:
               
chr4:13771335-13771523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
110, 128
               

               
Conread position:
               
174-414
               

               
Cow position:
               
chr4:46552271-46552508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
214, 79
               

               
Conread position:
               
174-477
               

               
Cow position:
               
chr4:49089843-49089540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
110, 129
               

               
Conread position:
               
174-488
               

               
Cow position:
               
chr4:33612293-33612628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 85
               

               
Conread position:
               
174-495
               

               
Cow position:
               
chr4:24744340-24744685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
117, 270
               

               
Conread position:
               
174-499
               

               
Cow position:
               
chr4:65406304-65406636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
90, 13
               

               
Conread position:
               
174-510
               

               
Cow position:
               
chr4:19256350-19256035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
214, 72
               

               
Conread position:
               
174-513
               

               
Cow position:
               
chr4:65841700-65842046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
39, 30
               

               
Conread position:
               
175-496
               

               
Cow position:
               
chr4:23494985-23494660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
159, 8
               

               
Conread position:
               
177-497
               

               
Cow position:
               
chr4:8947458-8947130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
96, 42
               

               
Conread position:
               
177-499
               

               
Cow position:
               
chr4:66112008-66112353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
177-507
               

               
Cow position:
               
chr4:25359661-25359318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
103, 124
               

               
Conread position:
               
177-521
               

               
Cow position:
               
chr4:14470507-14470869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 44
               

               
Conread position:
               
178-425
               

               
Cow position:
               
chr4:11496588-11496830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
202, 42
               

               
Conread position:
               
178-487
               

               
Cow position:
               
chr4:5798027-5797703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
179-499
               

               
Cow position:
               
chr4:39231460-39231799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
107, 174
               

               
Conread position:
               
179-518
               

               
Cow position:
               
chr4:27540680-27540323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
181-498
               

               
Cow position:
               
chr4:19008105-19007767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
125, 287
               

               
Conread position:
               
181-498
               

               
Cow position:
               
chr4:21371450-21371125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
94, 227
               

               
Conread position:
               
181-498
               

               
Cow position:
               
chr4:24458040-24458372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 246
               

               
Conread position:
               
181-521
               

               
Cow position:
               
chr4:43865798-43866148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
98, 55
               

               
Conread position:
               
183-495
               

               
Cow position:
               
chr4:44496430-44496112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
68, 127
               

               
Conread position:
               
185-499
               

               
Cow position:
               
chr4:13272197-13271872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
185-500
               

               
Cow position:
               
chr4:29237115-29237427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
105, 12
               

               
Conread position:
               
188-512
               

               
Cow position:
               
chr4:19142328-19142001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 83
               

               
Conread position:
               
189-484
               

               
Cow position:
               
chr4:123159-123462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
169, 23
               

               
Conread position:
               
196-466
               

               
Cow position:
               
chr4:24688301-24688589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
196-466
               

               
Cow position:
               
chr4:28172763-28173040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
89, 20
               

               
Conread position:
               
196-494
               

               
Cow position:
               
chr4:20299319-20298998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 96
               

               
Conread position:
               
196-499
               

               
Cow position:
               
chr4:12464885-12464570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
54, 44
               

               
Conread position:
               
199-423
               

               
Cow position:
               
chr4:3689745-3689511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
76, 137
               

               
Conread position:
               
208-499
               

               
Cow position:
               
chr4:47773606-47773908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
211-495
               

               
Cow position:
               
chr4:58261121-58261425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
211-497
               

               
Cow position:
               
chr4:36755769-36755475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
56, 29
               

               
Conread position:
               
211-497
               

               
Cow position:
               
chr4:46058735-46059013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
64, 41
               

               
Conread position:
               
211-499
               

               
Cow position:
               
chr4:19497234-19497526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 74
               

               
Conread position:
               
215-460
               

               
Cow position:
               
chr4:19463521-19463256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
216-494
               

               
Cow position:
               
chr4:13832584-13832873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
216-510
               

               
Cow position:
               
chr4:52016832-52017139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
66, 197
               

               
Conread position:
               
221-458
               

               
Cow position:
               
chr4:56435823-56435573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
87, 212
               

               
Conread position:
               
226-510
               

               
Cow position:
               
chr4:67408541-67408254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
57, 49
               

               
Conread position:
               
228-521
               

               
Cow position:
               
chr4:22215641-22215957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 241
               

               
Conread position:
               
229-466
               

               
Cow position:
               
chr4:33062904-33062670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
230-480
               

               
Cow position:
               
chr4:33357946-33357674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
52, 215
               

               
Conread position:
               
230-510
               

               
Cow position:
               
chr4:2422586-2422293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
57, 48
               

               
Conread position:
               
230-555
               

               
Cow position:
               
chr4:2610240-2609904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
44, 26
               

               
Conread position:
               
231-495
               

               
Cow position:
               
chr4:53209246-53208967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
56, 40
               

               
Conread position:
               
231-497
               

               
Cow position:
               
chr4:19438474-19438184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
231-499
               

               
Cow position:
               
chr4:46275187-46274917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 44
               

               
Conread position:
               
232-448
               

               
Cow position:
               
chr4:51083365-51083584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
111, 70
               

               
Conread position:
               
233-494
               

               
Cow position:
               
chr4:4737022-4736768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
122, 34
               

               
Conread position:
               
233-497
               

               
Cow position:
               
chr4:44024812-44025089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
73, 242
               

               
Conread position:
               
234-495
               

               
Cow position:
               
chr4:56410184-56409912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
42, 81
               

               
Conread position:
               
234-498
               

               
Cow position:
               
chr4:56233688-56233416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 237
               

               
Conread position:
               
235-492
               

               
Cow position:
               
chr4:49424832-49424569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
236-466
               

               
Cow position:
               
chr4:18576766-18577016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
46, 139
               

               
Conread position:
               
242-460
               

               
Cow position:
               
chr4:41907803-41908026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
242-499
               

               
Cow position:
               
chr4:23311271-23311536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
57, 22
               

               
Conread position:
               
250-498
               

               
Cow position:
               
chr4:25906337-25906598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
252-498
               

               
Cow position:
               
chr4:5777050-5777305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 12
               

               
Conread position:
               
254-385
               

               
Cow position:
               
chr4:34224101-34223962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
29, 17
               

               
Conread position:
               
255-498
               

               
Cow position:
               
chr4:11389572-11389811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
133, 53
               

               
Conread position:
               
256-495
               

               
Cow position:
               
chr4:29813560-29813803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
50, 166
               

               
Conread position:
               
257-498
               

               
Cow position:
               
chr4:51123028-51122782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 8
               

               
Conread position:
               
264-495
               

               
Cow position:
               
chr4:38309164-38309405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
265-494
               

               
Cow position:
               
chr4:51015076-51014847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
265-499
               

               
Cow position:
               
chr4:12018522-12018281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
51, 8
               

               
Conread position:
               
265-516
               

               
Cow position:
               
chr4:61720916-61721163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
6, 46
               

               
Conread position:
               
268-500
               

               
Cow position:
               
chr4:38799228-38799469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
270-451
               

               
Cow position:
               
chr4:37465620-37465809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
32, 166
               

               
Conread position:
               
270-541
               

               
Cow position:
               
chr4:9168692-9168968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
52, 40
               

               
Conread position:
               
271-494
               

               
Cow position:
               
chr4:53763152-53763390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
12, 47
               

               
Conread position:
               
273-489
               

               
Cow position:
               
chr4:61399474-61399691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
11, 81
               

               
Conread position:
               
276-521
               

               
Cow position:
               
chr4:62158227-62157972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
278-454
               

               
Cow position:
               
chr4:10016638-10016830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
278-497
               

               
Cow position:
               
chr4:59105855-59106085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 30
               

               
Conread position:
               
278-499
               

               
Cow position:
               
chr4:13142591-13142804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 34
               

               
Conread position:
               
279-493
               

               
Cow position:
               
chr4:56513982-56514209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
31, 87
               

               
Conread position:
               
279-518
               

               
Cow position:
               
chr4:30960464-30960223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 33
               

               
Conread position:
               
284-492
               

               
Cow position:
               
chr4:43542779-43543003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 28
               

               
Conread position:
               
289-466
               

               
Cow position:
               
chr4:65891930-65891751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
59, 12
               

               
Conread position:
               
300-476
               

               
Cow position:
               
chr4:53999581-53999757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 78
               

               
Conread position:
               
300-495
               

               
Cow position:
               
chr4:14942249-14942046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
300-497
               

               
Cow position:
               
chr4:51739781-51739977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
162, 90
               

               
Conread position:
               
300-500
               

               
Cow position:
               
chr4:21058455-21058662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
50, 30
               

               
Conread position:
               
301-519
               

               
Cow position:
               
chr4:62570745-62570516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
36, 57
               

               
Conread position:
               
303-426
               

               
Cow position:
               
chr4:13974044-13974172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
303-449
               

               
Cow position:
               
chr4:27687849-27687700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
303-454
               

               
Cow position:
               
chr4:44902361-44902215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
303-459
               

               
Cow position:
               
chr4:43295769-43295925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
14, 94
               

               
Conread position:
               
303-460
               

               
Cow position:
               
chr4:23911658-23911823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
47, 139
               

               
Conread position:
               
303-464
               

               
Cow position:
               
chr4:2602157-2601991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
303-466
               

               
Cow position:
               
chr4:11897373-11897539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
303-466
               

               
Cow position:
               
chr4:46370740-46370570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
303-466
               

               
Cow position:
               
chr4:64040026-64039868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
52, 77
               

               
Conread position:
               
303-466
               

               
Cow position:
               
chr4:65538492-65538648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 95
               

               
Conread position:
               
303-472
               

               
Cow position:
               
chr4:46501277-46501108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
52, 77
               

               
Conread position:
               
303-473
               

               
Cow position:
               
chr4:13256013-13255846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
303-474
               

               
Cow position:
               
chr4:53447743-53447917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
303-477
               

               
Cow position:
               
chr4:20157492-20157667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
303-480
               

               
Cow position:
               
chr4:45367661-45367479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
303-482
               

               
Cow position:
               
chr4:2536756-2536574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
85, 125
               

               
Conread position:
               
303-482
               

               
Cow position:
               
chr4:35940081-35940270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
303-485
               

               
Cow position:
               
chr4:26307574-26307762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
86, 44
               

               
Conread position:
               
303-485
               

               
Cow position:
               
chr4:47290002-47289808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
303-487
               

               
Cow position:
               
chr4:31348264-31348458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
47, 39
               

               
Conread position:
               
303-490
               

               
Cow position:
               
chr4:54667763-54667958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
303-491
               

               
Cow position:
               
chr4:23573475-23573273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
303-493
               

               
Cow position:
               
chr4:22051548-22051739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
93, 35
               

               
Conread position:
               
303-493
               

               
Cow position:
               
chr4:42266827-42267012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
159, 74
               

               
Conread position:
               
303-495
               

               
Cow position:
               
chr4:11671379-11671180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
80, 47
               

               
Conread position:
               
303-495
               

               
Cow position:
               
chr4:27755375-27755579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
303-495
               

               
Cow position:
               
chr4:30690646-30690452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
48, 79
               

               
Conread position:
               
303-495
               

               
Cow position:
               
chr4:33421434-33421633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
53, 7
               

               
Conread position:
               
303-495
               

               
Cow position:
               
chr4:39009891-39009695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
303-495
               

               
Cow position:
               
chr4:51784103-51783908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
159, 82
               

               
Conread position:
               
303-496
               

               
Cow position:
               
chr4:41185984-41186175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
115, 53
               

               
Conread position:
               
303-497
               

               
Cow position:
               
chr4:480080-480281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
303-497
               

               
Cow position:
               
chr4:23568069-23567862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
303-497
               

               
Cow position:
               
chr4:54930495-54930690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
52, 83
               

               
Conread position:
               
303-497
               

               
Cow position:
               
chr4:57931838-57931637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 111
               

               
Conread position:
               
303-497
               

               
Cow position:
               
chr4:62772000-62772209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
303-497
               

               
Cow position:
               
chr4:63365451-63365651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
47, 144
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr4:27292031-27292234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
85, 122
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr4:34209956-34209751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr4:37619962-37620162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
53, 175
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr4:52166928-52167118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
123, 74
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr4:54975224-54975033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
52, 63
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr4:67392884-67392695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 103
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr4:69343634-69343441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
46, 75
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr4:10026406-10026212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
158, 80
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr4:10034825-10034628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
91, 9
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr4:10037339-10037134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr4:10412300-10412103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
86, 13
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr4:11201744-11201541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr4:11901636-11901839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr4:16736433-16736227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr4:17474364-17474161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr4:24118982-24119187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr4:27546691-27546483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr4:37343040-37342841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr4:43369927-43370126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
52, 94
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr4:53832973-53832775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
86, 122
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr4:54468367-54468572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
88, 47
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr4:60897351-60897549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
161, 75
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr4:64072424-64072628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
77, 192
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr4:67599812-67600001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
303-500
               

               
Cow position:
               
chr4:561326-561124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
303-500
               

               
Cow position:
               
chr4:11090769-11090963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
53, 19
               

               
Conread position:
               
303-500
               

               
Cow position:
               
chr4:42232583-42232391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
52, 95
               

               
Conread position:
               
303-500
               

               
Cow position:
               
chr4:48137836-48137637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
53, 80
               

               
Conread position:
               
303-504
               

               
Cow position:
               
chr4:11025433-11025644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
51, 90
               

               
Conread position:
               
303-508
               

               
Cow position:
               
chr4:54501524-54501733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
85, 204
               

               
Conread position:
               
303-510
               

               
Cow position:
               
chr4:19313936-19313716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
303-510
               

               
Cow position:
               
chr4:51866920-51866706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
86, 41
               

               
Conread position:
               
303-515
               

               
Cow position:
               
chr4:17052676-17052889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
50, 95
               

               
Conread position:
               
303-518
               

               
Cow position:
               
chr4:10025201-10024992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
303-520
               

               
Cow position:
               
chr4:5999266-5999492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
83, 44
               

               
Conread position:
               
303-520
               

               
Cow position:
               
chr4:11021729-11021948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
54, 79
               

               
Conread position:
               
303-520
               

               
Cow position:
               
chr4:45589674-45589881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 58
               

               
Conread position:
               
303-528
               

               
Cow position:
               
chr4:620225-620453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
86, 187
               

               
Conread position:
               
303-547
               

               
Cow position:
               
chr4:1237191-1237440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
53, 74
               

               
Conread position:
               
304-458
               

               
Cow position:
               
chr4:16091475-16091632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
41, 7
               

               
Conread position:
               
304-458
               

               
Cow position:
               
chr4:43749884-43750044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
304-466
               

               
Cow position:
               
chr4:656890-657058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
20, 85
               

               
Conread position:
               
304-466
               

               
Cow position:
               
chr4:14919919-14919757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
51, 64
               

               
Conread position:
               
304-477
               

               
Cow position:
               
chr4:26549383-26549209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
156, 93
               

               
Conread position:
               
304-481
               

               
Cow position:
               
chr4:12259857-12260040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 16
               

               
Conread position:
               
304-481
               

               
Cow position:
               
chr4:38181603-38181423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
85, 26
               

               
Conread position:
               
304-485
               

               
Cow position:
               
chr4:43909667-43909490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
45, 68
               

               
Conread position:
               
304-488
               

               
Cow position:
               
chr4:27561321-27561131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
304-488
               

               
Cow position:
               
chr4:46597302-46597118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
51, 80
               

               
Conread position:
               
304-489
               

               
Cow position:
               
chr4:24432566-24432381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 79
               

               
Conread position:
               
304-492
               

               
Cow position:
               
chr4:26400886-26400688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
304-492
               

               
Cow position:
               
chr4:63119313-63119500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 81
               

               
Conread position:
               
304-493
               

               
Cow position:
               
chr4:41301066-41301261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
304-494
               

               
Cow position:
               
chr4:16339675-16339863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
85, 23
               

               
Conread position:
               
304-494
               

               
Cow position:
               
chr4:45918959-45918760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
84, 23
               

               
Conread position:
               
304-495
               

               
Cow position:
               
chr4:22744249-22744052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
304-495
               

               
Cow position:
               
chr4:36813297-36813100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
304-495
               

               
Cow position:
               
chr4:57555895-57555694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
304-495
               

               
Cow position:
               
chr4:60624667-60624857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
304-496
               

               
Cow position:
               
chr4:10056137-10055938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
51, 83
               

               
Conread position:
               
304-496
               

               
Cow position:
               
chr4:21064081-21064277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 46
               

               
Conread position:
               
304-496
               

               
Cow position:
               
chr4:22115532-22115333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
304-497
               

               
Cow position:
               
chr4:12697564-12697372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
158, 25
               

               
Conread position:
               
304-497
               

               
Cow position:
               
chr4:15623768-15623570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
24, 164
               

               
Conread position:
               
304-497
               

               
Cow position:
               
chr4:23570727-23570523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
304-497
               

               
Cow position:
               
chr4:44072842-44073044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
304-497
               

               
Cow position:
               
chr4:45114681-45114880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
304-497
               

               
Cow position:
               
chr4:56852827-56852623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
304-498
               

               
Cow position:
               
chr4:27997607-27997409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
304-498
               

               
Cow position:
               
chr4:46668491-46668295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
54, 29
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr4:7249645-7249845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr4:18095746-18095952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr4:22236556-22236751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
51, 76
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr4:24371928-24372127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
49, 75
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr4:25972821-25972623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr4:30574375-30574180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
156, 90
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr4:37553115-37553320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr4:41441493-41441289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr4:46176535-46176740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 88
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr4:53545952-53545753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
45, 96
               

               
Conread position:
               
304-499
               

               
Cow position:
               
chr4:60370904-60371111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
304-501
               

               
Cow position:
               
chr4:37470475-37470273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
84, 41
               

               
Conread position:
               
304-510
               

               
Cow position:
               
chr4:3990699-3990911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
51, 79
               

               
Conread position:
               
304-510
               

               
Cow position:
               
chr4:4672407-4672622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
50, 11
               

               
Conread position:
               
304-510
               

               
Cow position:
               
chr4:21365330-21365127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
30, 155
               

               
Conread position:
               
304-512
               

               
Cow position:
               
chr4:65168082-65168295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
85, 23
               

               
Conread position:
               
304-521
               

               
Cow position:
               
chr4:19561608-19561394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
158, 81
               

               
Conread position:
               
304-521
               

               
Cow position:
               
chr4:24671249-24671477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 205
               

               
Conread position:
               
304-521
               

               
Cow position:
               
chr4:32259921-32260148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
50, 30
               

               
Conread position:
               
305-486
               

               
Cow position:
               
chr4:961739-961926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
22, 132
               

               
Conread position:
               
305-497
               

               
Cow position:
               
chr4:44612927-44612729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
305-498
               

               
Cow position:
               
chr4:22528464-22528662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
305-498
               

               
Cow position:
               
chr4:25888907-25889110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
305-498
               

               
Cow position:
               
chr4:26163050-26163245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
45, 89
               

               
Conread position:
               
305-499
               

               
Cow position:
               
chr4:10992275-10992476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
64, 34
               

               
Conread position:
               
305-516
               

               
Cow position:
               
chr4:36724961-36724755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
306-480
               

               
Cow position:
               
chr4:59008447-59008626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
306-489
               

               
Cow position:
               
chr4:8704908-8704728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 59
               

               
Conread position:
               
306-495
               

               
Cow position:
               
chr4:52632043-52632241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
21, 118
               

               
Conread position:
               
306-499
               

               
Cow position:
               
chr4:17124374-17124567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
98, 74
               

               
Conread position:
               
306-499
               

               
Cow position:
               
chr4:19307182-19306980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
306-499
               

               
Cow position:
               
chr4:19558641-19558451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
47, 90
               

               
Conread position:
               
306-503
               

               
Cow position:
               
chr4:43495823-43495622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
306-510
               

               
Cow position:
               
chr4:1915656-1915864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
89, 200
               

               
Conread position:
               
309-455
               

               
Cow position:
               
chr4:22860794-22860935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
309-489
               

               
Cow position:
               
chr4:15462357-15462539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
309-491
               

               
Cow position:
               
chr4:13327034-13327226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
309-493
               

               
Cow position:
               
chr4:39128453-39128259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
309-494
               

               
Cow position:
               
chr4:26746401-26746213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
309-495
               

               
Cow position:
               
chr4:23060077-23060276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
309-498
               

               
Cow position:
               
chr4:48499760-48499573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 90
               

               
Conread position:
               
309-499
               

               
Cow position:
               
chr4:8801420-8801227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
117, 41
               

               
Conread position:
               
309-499
               

               
Cow position:
               
chr4:10036445-10036250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
309-500
               

               
Cow position:
               
chr4:27511182-27510994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
153, 40
               

               
Conread position:
               
309-503
               

               
Cow position:
               
chr4:6792357-6792162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
20, 89
               

               
Conread position:
               
309-510
               

               
Cow position:
               
chr4:69406290-69406079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
80, 41
               

               
Conread position:
               
310-487
               

               
Cow position:
               
chr4:32726144-32725960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
310-499
               

               
Cow position:
               
chr4:61215079-61215274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
43, 95
               

               
Conread position:
               
311-486
               

               
Cow position:
               
chr4:10472140-10471960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
312-465
               

               
Cow position:
               
chr4:65731002-65731159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
312-473
               

               
Cow position:
               
chr4:5629836-5630003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
312-495
               

               
Cow position:
               
chr4:62567327-62567133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
312-496
               

               
Cow position:
               
chr4:10905549-10905732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
87, 47
               

               
Conread position:
               
312-497
               

               
Cow position:
               
chr4:61972545-61972749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 195
               

               
Conread position:
               
312-499
               

               
Cow position:
               
chr4:26175325-26175519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
49, 38
               

               
Conread position:
               
312-499
               

               
Cow position:
               
chr4:28613740-28613545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
312-499
               

               
Cow position:
               
chr4:32827209-32827398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 142
               

               
Conread position:
               
312-499
               

               
Cow position:
               
chr4:45511053-45511250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
312-499
               

               
Cow position:
               
chr4:62471988-62471792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
312-510
               

               
Cow position:
               
chr4:14513320-14513526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 188
               

               
Conread position:
               
312-510
               

               
Cow position:
               
chr4:61304503-61304713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
313-493
               

               
Cow position:
               
chr4:65825937-65826125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
76, 17
               

               
Conread position:
               
313-507
               

               
Cow position:
               
chr4:5984124-5984328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
42, 198
               

               
Conread position:
               
314-498
               

               
Cow position:
               
chr4:22849800-22849985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
40, 84
               

               
Conread position:
               
315-497
               

               
Cow position:
               
chr4:19542710-19542520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
316-478
               

               
Cow position:
               
chr4:40410209-40410375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
316-488
               

               
Cow position:
               
chr4:51630575-51630392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
316-495
               

               
Cow position:
               
chr4:22072758-22072945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
316-497
               

               
Cow position:
               
chr4:6630378-6630565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
317-499
               

               
Cow position:
               
chr4:41097829-41097644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
30, 115
               

               
Conread position:
               
318-472
               

               
Cow position:
               
chr4:63813395-63813546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
55, 78
               

               
Conread position:
               
318-477
               

               
Cow position:
               
chr4:41292066-41292234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
318-483
               

               
Cow position:
               
chr4:6208374-6208211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 53
               

               
Conread position:
               
318-491
               

               
Cow position:
               
chr4:10871486-10871658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
76, 29
               

               
Conread position:
               
318-495
               

               
Cow position:
               
chr4:52584472-52584654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 13
               

               
Conread position:
               
318-497
               

               
Cow position:
               
chr4:16637689-16637872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 47
               

               
Conread position:
               
318-497
               

               
Cow position:
               
chr4:22259516-22259692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
318-499
               

               
Cow position:
               
chr4:26469556-26469368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
48, 61
               

               
Conread position:
               
318-499
               

               
Cow position:
               
chr4:56226794-56226613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
143, 26
               

               
Conread position:
               
318-513
               

               
Cow position:
               
chr4:34171657-34171861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
32, 108
               

               
Conread position:
               
319-499
               

               
Cow position:
               
chr4:21246654-21246840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
36, 57
               

               
Conread position:
               
320-499
               

               
Cow position:
               
chr4:18255763-18255588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
140, 27
               

               
Conread position:
               
322-487
               

               
Cow position:
               
chr4:22249539-22249707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
322-495
               

               
Cow position:
               
chr4:49992984-49992814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
132, 42
               

               
Conread position:
               
323-498
               

               
Cow position:
               
chr4:46385669-46385853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 8
               

               
Conread position:
               
329-483
               

               
Cow position:
               
chr4:61066547-61066392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
133, 13
               

               
Conread position:
               
333-499
               

               
Cow position:
               
chr4:2244091-2244264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
64, 108
               

               
Conread position:
               
333-499
               

               
Cow position:
               
chr4:28377758-28377925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
335-521
               

               
Cow position:
               
chr4:29035811-29035617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 113
               

               
Conread position:
               
335-528
               

               
Cow position:
               
chr4:40576026-40576220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
14, 44
               

               
Conread position:
               
337-498
               

               
Cow position:
               
chr4:18099083-18099248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
52, 144
               

               
Conread position:
               
337-499
               

               
Cow position:
               
chr4:55508523-55508693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
339-492
               

               
Cow position:
               
chr4:14131402-14131247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
339-495
               

               
Cow position:
               
chr4:13818537-13818702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
30, 163
               

               
Conread position:
               
341-495
               

               
Cow position:
               
chr4:64661425-64661582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
342-479
               

               
Cow position:
               
chr4:19577952-19577807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
346-481
               

               
Cow position:
               
chr4:10993668-10993808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
346-499
               

               
Cow position:
               
chr4:58424506-58424661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
26, 10
               

               
Conread position:
               
347-497
               

               
Cow position:
               
chr4:58687552-58687711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
350-486
               

               
Cow position:
               
chr4:455175-455031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
350-493
               

               
Cow position:
               
chr4:488559-488711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
350-494
               

               
Cow position:
               
chr4:59833816-59833669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 87
               

               
Conread position:
               
350-497
               

               
Cow position:
               
chr4:5850449-5850606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
350-497
               

               
Cow position:
               
chr4:61999576-61999727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
350-498
               

               
Cow position:
               
chr4:8692283-8692435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
350-499
               

               
Cow position:
               
chr4:49409347-49409189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
350-499
               

               
Cow position:
               
chr4:58512686-58512839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
41, 83
               

               
Conread position:
               
352-493
               

               
Cow position:
               
chr4:9442-9586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
352-499
               

               
Cow position:
               
chr4:38945921-38945769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
352-515
               

               
Cow position:
               
chr4:61969758-61969927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
45, 154
               

               
Conread position:
               
353-466
               

               
Cow position:
               
chr4:52177527-52177411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
353-494
               

               
Cow position:
               
chr4:69515248-69515389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
116, 29
               

               
Conread position:
               
353-520
               

               
Cow position:
               
chr4:3274660-3274832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
354-499
               

               
Cow position:
               
chr4:26009324-26009170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
354-500
               

               
Cow position:
               
chr4:5577614-5577767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
34, 133
               

               
Conread position:
               
354-521
               

               
Cow position:
               
chr4:46708654-46708828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 150
               

               
Conread position:
               
357-492
               

               
Cow position:
               
chr4:10041908-10041769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
365-466
               

               
Cow position:
               
chr4:18756048-18755946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 98
               

               
Conread position:
               
365-493
               

               
Cow position:
               
chr4:47280262-47280398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
366-499
               

               
Cow position:
               
chr4:20116992-20117124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
96, 31
               

               
Conread position:
               
368-510
               

               
Cow position:
               
chr4:41833410-41833551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
373-499
               

               
Cow position:
               
chr4:61450624-61450492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
380-497
               

               
Cow position:
               
chr4:48172957-48172839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
383-495
               

               
Cow position:
               
chr4:1463126-1463011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
383-499
               

               
Cow position:
               
chr4:48409713-48409835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
385-499
               

               
Cow position:
               
chr4:34223729-34223616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
74, 36
               

               
Conread position:
               
385-499
               

               
Cow position:
               
chr4:38067724-38067607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
385-521
               

               
Cow position:
               
chr4:54479344-54479479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
129, 12
               

               
Conread position:
               
396-499
               

               
Cow position:
               
chr4:41186537-41186644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
403-499
               

               
Cow position:
               
chr4:41999363-41999460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               
Show alignments to all cow chromosomes.