Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8024C11.5
        

               Conread position:
               1-188
               

               Cow position:
               chr5:24697769-24697574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               111, 103
               

               Conread position:
               182-396
               

               Cow position:
               chr5:24697104-24696890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               448-573
               

               Cow position:
               chr5:24690801-24690674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               656-825
               

               Cow position:
               chr5:24690225-24690056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               154
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               826-912
               

               Cow position:
               chr5:24689487-24689401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               87
               

               Alignm identity:
               83
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               938-1020
               

               Cow position:
               chr5:24678485-24678403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               83
               

               Alignm identity:
               76
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1006-1211
               

               Cow position:
               chr5:24678092-24677887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               161
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.