Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8024K03.3 |
| Conread position: | 447-580 |
| Cow position: | chr15:36259493-36259627 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 447-580 |
| Cow position: | chr15:50333092-50332958 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 7, 65 |
| Conread position: | 447-583 |
| Cow position: | chr15:23275653-23275516 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 447-584 |
| Cow position: | chr15:30470861-30470999 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 447-594 |
| Cow position: | chr15:40594394-40594541 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 99, 137 |
| Conread position: | 448-572 |
| Cow position: | chr15:6905186-6905062 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 92, 84 |
| Conread position: | 448-575 |
| Cow position: | chr15:17870172-17870302 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 448-580 |
| Cow position: | chr15:47042519-47042654 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 448-582 |
| Cow position: | chr15:16823046-16822914 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 5, 57 |
| Conread position: | 448-582 |
| Cow position: | chr15:26851116-26851255 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 448-582 |
| Cow position: | chr15:47843983-47844118 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 448-594 |
| Cow position: | chr15:8354151-8354004 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 98, 142 |
| Conread position: | 449-582 |
| Cow position: | chr15:5420775-5420910 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 449-582 |
| Cow position: | chr15:19002167-19002305 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 450-575 |
| Cow position: | chr15:9879269-9879396 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 450-576 |
| Cow position: | chr15:25907015-25906888 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 450-578 |
| Cow position: | chr15:26404390-26404262 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 96, 54 |
| Conread position: | 450-580 |
| Cow position: | chr15:24994405-24994536 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 450-581 |
| Cow position: | chr15:37284561-37284429 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 450-581 |
| Cow position: | chr15:44237525-44237393 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 450-581 |
| Cow position: | chr15:49784177-49784309 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 450-582 |
| Cow position: | chr15:3695740-3695609 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 96, 59 |
| Conread position: | 450-582 |
| Cow position: | chr15:25650305-25650435 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 95, 53 |
| Conread position: | 450-582 |
| Cow position: | chr15:46868607-46868739 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 96, 88 |
| Conread position: | 450-582 |
| Cow position: | chr15:53716542-53716410 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 99, 122 |
| Conread position: | 450-583 |
| Cow position: | chr15:33306217-33306084 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 96, 23 |
| Conread position: | 450-583 |
| Cow position: | chr15:36952096-36952229 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 129, 58 |
| Conread position: | 450-584 |
| Cow position: | chr15:27063413-27063548 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 10 |
| Conread position: | 450-594 |
| Cow position: | chr15:21821094-21820953 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 111, 52 |
| Conread position: | 450-594 |
| Cow position: | chr15:42789039-42789184 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 7, 129 |
| Conread position: | 451-579 |
| Cow position: | chr15:78678-78552 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 20, 53 |
| Conread position: | 451-593 |
| Cow position: | chr15:16307529-16307388 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 95, 133 |
| Conread position: | 454-582 |
| Cow position: | chr15:16908537-16908408 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 454-582 |
| Cow position: | chr15:24982074-24982204 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 462-593 |
| Cow position: | chr15:10049217-10049344 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 87, 42 |
| Conread position: | 467-594 |
| Cow position: | chr15:34223957-34223828 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 474-594 |
| Cow position: | chr15:28099196-28099076 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 71, 111 |
Show alignments to all cow chromosomes.