Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8024K03.3 |
| Conread position: | 407-582 |
| Cow position: | chr19:24692935-24693111 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 437-584 |
| Cow position: | chr19:25835369-25835225 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 109, 15 |
| Conread position: | 444-582 |
| Cow position: | chr19:34459506-34459368 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 102, 19 |
| Conread position: | 447-578 |
| Cow position: | chr19:41584936-41585068 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 447-582 |
| Cow position: | chr19:18054289-18054153 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 447-582 |
| Cow position: | chr19:28810350-28810213 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 447-582 |
| Cow position: | chr19:35107499-35107629 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 447-584 |
| Cow position: | chr19:10538584-10538446 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 447-594 |
| Cow position: | chr19:34001174-34001322 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 448-574 |
| Cow position: | chr19:1854072-1853948 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 98, 33 |
| Conread position: | 448-580 |
| Cow position: | chr19:12705870-12705738 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 98, 127 |
| Conread position: | 448-580 |
| Cow position: | chr19:24253331-24253197 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 448-582 |
| Cow position: | chr19:3621398-3621532 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 448-582 |
| Cow position: | chr19:18786353-18786219 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 98, 47 |
| Conread position: | 448-582 |
| Cow position: | chr19:23832627-23832490 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 448-582 |
| Cow position: | chr19:25763082-25763214 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 98, 55 |
| Conread position: | 448-582 |
| Cow position: | chr19:38500135-38500267 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 98, 55 |
| Conread position: | 448-582 |
| Cow position: | chr19:48960366-48960497 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 448-585 |
| Cow position: | chr19:10930448-10930312 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 98, 35 |
| Conread position: | 448-594 |
| Cow position: | chr19:16567122-16567267 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 449-579 |
| Cow position: | chr19:21378500-21378369 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 449-581 |
| Cow position: | chr19:24005624-24005756 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 97, 22 |
| Conread position: | 449-582 |
| Cow position: | chr19:24062246-24062380 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 449-593 |
| Cow position: | chr19:27612201-27612056 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 139 |
| Conread position: | 450-572 |
| Cow position: | chr19:3834244-3834366 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 96, 19 |
| Conread position: | 450-575 |
| Cow position: | chr19:34420385-34420505 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 96, 26 |
| Conread position: | 450-576 |
| Cow position: | chr19:37633255-37633128 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 450-580 |
| Cow position: | chr19:20670936-20670805 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 450-580 |
| Cow position: | chr19:42768128-42767996 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 450-580 |
| Cow position: | chr19:49221651-49221520 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 450-581 |
| Cow position: | chr19:13488532-13488398 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 450-581 |
| Cow position: | chr19:23378646-23378778 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 450-581 |
| Cow position: | chr19:34654640-34654509 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 96, 58 |
| Conread position: | 450-581 |
| Cow position: | chr19:39576598-39576466 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 450-581 |
| Cow position: | chr19:41946153-41946285 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 450-581 |
| Cow position: | chr19:43413751-43413885 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 450-582 |
| Cow position: | chr19:4587768-4587635 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 450-582 |
| Cow position: | chr19:10238707-10238840 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 450-582 |
| Cow position: | chr19:23087954-23088087 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 450-582 |
| Cow position: | chr19:33913497-33913630 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 450-582 |
| Cow position: | chr19:38732109-38732242 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 450-582 |
| Cow position: | chr19:39057212-39057348 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 450-584 |
| Cow position: | chr19:23756772-23756637 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 450-585 |
| Cow position: | chr19:25726911-25726777 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 95, 118 |
| Conread position: | 450-594 |
| Cow position: | chr19:12052876-12052736 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 96, 63 |
| Conread position: | 450-594 |
| Cow position: | chr19:12067715-12067855 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 96, 63 |
| Conread position: | 450-594 |
| Cow position: | chr19:16105110-16104966 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 95, 136 |
| Conread position: | 450-594 |
| Cow position: | chr19:21199109-21199255 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 450-610 |
| Cow position: | chr19:34955728-34955568 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 98, 116 |
| Conread position: | 451-564 |
| Cow position: | chr19:45396547-45396432 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 451-580 |
| Cow position: | chr19:40127195-40127065 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 451-581 |
| Cow position: | chr19:23889516-23889385 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 451-582 |
| Cow position: | chr19:8375331-8375199 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 451-593 |
| Cow position: | chr19:15719646-15719503 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 95, 16 |
| Conread position: | 452-594 |
| Cow position: | chr19:34758030-34757886 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 454-591 |
| Cow position: | chr19:47671718-47671855 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 92, 131 |
| Conread position: | 456-580 |
| Cow position: | chr19:5656148-5656023 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 456-580 |
| Cow position: | chr19:7637259-7637134 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 457-581 |
| Cow position: | chr19:11646544-11646669 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 461-581 |
| Cow position: | chr19:39981717-39981838 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 76 |
| Conread position: | 461-582 |
| Cow position: | chr19:25832218-25832096 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 467-575 |
| Cow position: | chr19:19916433-19916324 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
Show alignments to all cow chromosomes.