Cow genome map

Conread name: Ss1.1-Pig3-SRG8024K03.3

Conread position: 447-580
Cow position: chr2:37619935-37619801 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 447-581
Cow position: chr2:25448307-25448443 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 447-582
Cow position: chr2:30911300-30911436 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 447-594
Cow position: chr2:5604504-5604652 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 93, 83

Conread position: 448-572
Cow position: chr2:45912652-45912527 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 448-572
Cow position: chr2:58479693-58479569 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 101, 115

Conread position: 448-576
Cow position: chr2:17257828-17257953 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 448-580
Cow position: chr2:40373418-40373288 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 60

Conread position: 448-580
Cow position: chr2:54810872-54810742 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 98, 71

Conread position: 448-580
Cow position: chr2:58035087-58035220 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 448-580
Cow position: chr2:58074364-58074232 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 101, 87

Conread position: 448-581
Cow position: chr2:17842008-17841879 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 448-581
Cow position: chr2:38965600-38965731 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 98, 72

Conread position: 448-582
Cow position: chr2:38640303-38640438 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 448-582
Cow position: chr2:43994915-43995051 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 448-582
Cow position: chr2:44191460-44191594 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 97, 115

Conread position: 448-582
Cow position: chr2:74260438-74260571 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 98, 87

Conread position: 448-584
Cow position: chr2:77467468-77467333 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 98, 71

Conread position: 448-593
Cow position: chr2:58686906-58687051 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 98, 139

Conread position: 448-594
Cow position: chr2:45784717-45784865 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 44, 138

Conread position: 448-594
Cow position: chr2:72183512-72183365 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 448-595
Cow position: chr2:82116070-82116214 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 98, 115

Conread position: 449-594
Cow position: chr2:33554189-33554044 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 135

Conread position: 450-577
Cow position: chr2:43609136-43609008 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 450-579
Cow position: chr2:39941460-39941587 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 22

Conread position: 450-580
Cow position: chr2:21003156-21003286 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 96, 116

Conread position: 450-580
Cow position: chr2:46052482-46052612 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 96, 42

Conread position: 450-580
Cow position: chr2:46968207-46968079 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 52

Conread position: 450-580
Cow position: chr2:47015351-47015223 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 96, 41

Conread position: 450-581
Cow position: chr2:13672506-13672632 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 450-581
Cow position: chr2:15694188-15694319 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 111
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 96, 71

Conread position: 450-581
Cow position: chr2:17444778-17444911 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 122

Conread position: 450-581
Cow position: chr2:19494196-19494328 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 96, 0

Conread position: 450-581
Cow position: chr2:21410201-21410334 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 450-581
Cow position: chr2:24434297-24434166 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 90, 13

Conread position: 450-581
Cow position: chr2:43591391-43591259 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 57, 79

Conread position: 450-581
Cow position: chr2:44217926-44217795 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 96, 38

Conread position: 450-581
Cow position: chr2:77157363-77157234 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 53

Conread position: 450-582
Cow position: chr2:994383-994250 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 450-582
Cow position: chr2:18997702-18997834 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 96, 13

Conread position: 450-582
Cow position: chr2:38362383-38362251 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 96, 82

Conread position: 450-582
Cow position: chr2:40466617-40466750 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 96, 0

Conread position: 450-582
Cow position: chr2:45542417-45542284 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 450-582
Cow position: chr2:46189114-46188981 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 450-582
Cow position: chr2:46227442-46227573 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 90, 19

Conread position: 450-582
Cow position: chr2:53491469-53491334 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 450-582
Cow position: chr2:53851419-53851551 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 96, 61

Conread position: 450-582
Cow position: chr2:54971158-54971294 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 450-582
Cow position: chr2:59427432-59427564 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 96, 36

Conread position: 450-585
Cow position: chr2:30144700-30144830 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 51

Conread position: 450-591
Cow position: chr2:35948697-35948555 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 90, 56

Conread position: 450-593
Cow position: chr2:1335713-1335568 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 450-594
Cow position: chr2:13001781-13001921 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 93, 60

Conread position: 450-594
Cow position: chr2:40880053-40880196 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 53

Conread position: 450-594
Cow position: chr2:46161939-46162083 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 96, 134

Conread position: 450-594
Cow position: chr2:47624424-47624281 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 96, 54

Conread position: 450-594
Cow position: chr2:50449928-50449783 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 450-594
Cow position: chr2:50905728-50905581 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 450-594
Cow position: chr2:63074870-63074729 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 53

Conread position: 450-594
Cow position: chr2:71437396-71437249 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 450-594
Cow position: chr2:83184136-83184280 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 96, 134

Conread position: 451-580
Cow position: chr2:7573521-7573392 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 57

Conread position: 451-581
Cow position: chr2:70704241-70704372 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 451-582
Cow position: chr2:44007402-44007537 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 451-582
Cow position: chr2:44170542-44170673 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 111

Conread position: 451-582
Cow position: chr2:46247478-46247346 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 451-582
Cow position: chr2:46351799-46351667 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 451-582
Cow position: chr2:47879224-47879355 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 119

Conread position: 451-582
Cow position: chr2:60091450-60091319 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 112

Conread position: 451-582
Cow position: chr2:62744025-62743894 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 95, 57

Conread position: 451-594
Cow position: chr2:8821215-8821360 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 451-594
Cow position: chr2:10439822-10439964 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 119

Conread position: 451-594
Cow position: chr2:14634167-14634310 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 133

Conread position: 451-594
Cow position: chr2:40703683-40703539 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 89, 113

Conread position: 451-594
Cow position: chr2:69350582-69350439 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 95, 127

Conread position: 452-581
Cow position: chr2:1638588-1638717 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 56

Conread position: 452-582
Cow position: chr2:11599409-11599537 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 49

Conread position: 452-582
Cow position: chr2:69747632-69747501 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 88, 0

Conread position: 452-592
Cow position: chr2:51099991-51099847 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 453-582
Cow position: chr2:43624549-43624418 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 73, 37

Conread position: 454-579
Cow position: chr2:28330761-28330636 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 454-582
Cow position: chr2:39584435-39584563 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 92, 112

Conread position: 454-582
Cow position: chr2:40257426-40257297 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 92, 0

Conread position: 454-582
Cow position: chr2:45499216-45499087 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 454-582
Cow position: chr2:84480515-84480386 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 454-584
Cow position: chr2:40403041-40402910 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 454-584
Cow position: chr2:44222810-44222941 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 455-581
Cow position: chr2:549340-549216 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 85, 48

Conread position: 455-582
Cow position: chr2:1476397-1476522 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 48

Conread position: 455-587
Cow position: chr2:14089780-14089915 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 456-582
Cow position: chr2:41248559-41248685 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 90, 114

Conread position: 456-594
Cow position: chr2:42801028-42801166 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 84, 35

Conread position: 458-581
Cow position: chr2:827621-827497 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 0

Show alignments to all cow chromosomes.