Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8024K03.3 |
| Conread position: | 447-576 |
| Cow position: | chr22:4645748-4645876 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 447-576 |
| Cow position: | chr22:6176310-6176181 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 93, 37 |
| Conread position: | 447-582 |
| Cow position: | chr22:10557255-10557390 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 93, 46 |
| Conread position: | 447-585 |
| Cow position: | chr22:9977786-9977923 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 99, 16 |
| Conread position: | 447-585 |
| Cow position: | chr22:10295014-10295149 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 99, 56 |
| Conread position: | 447-591 |
| Cow position: | chr22:10323855-10324000 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 447-594 |
| Cow position: | chr22:13957669-13957522 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 99, 138 |
| Conread position: | 448-581 |
| Cow position: | chr22:12341173-12341306 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 98, 63 |
| Conread position: | 448-581 |
| Cow position: | chr22:30998862-30998996 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 448-582 |
| Cow position: | chr22:4017453-4017584 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 98, 58 |
| Conread position: | 448-582 |
| Cow position: | chr22:25742973-25742838 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 448-582 |
| Cow position: | chr22:26141254-26141385 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 448-582 |
| Cow position: | chr22:34104696-34104561 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 448-591 |
| Cow position: | chr22:4563338-4563484 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 448-591 |
| Cow position: | chr22:30818189-30818331 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 92, 109 |
| Conread position: | 448-591 |
| Cow position: | chr22:34441657-34441508 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 448-594 |
| Cow position: | chr22:25387303-25387451 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 78, 88 |
| Conread position: | 449-575 |
| Cow position: | chr22:845880-846007 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 449-584 |
| Cow position: | chr22:1838286-1838421 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 97, 9 |
| Conread position: | 450-573 |
| Cow position: | chr22:12157866-12157742 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 450-575 |
| Cow position: | chr22:38439179-38439053 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 450-578 |
| Cow position: | chr22:22613084-22613212 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 96, 113 |
| Conread position: | 450-579 |
| Cow position: | chr22:17152655-17152785 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 96, 123 |
| Conread position: | 450-580 |
| Cow position: | chr22:3251016-3250885 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 450-580 |
| Cow position: | chr22:4137673-4137542 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 450-580 |
| Cow position: | chr22:8324217-8324345 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 450-580 |
| Cow position: | chr22:15039206-15039073 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 450-580 |
| Cow position: | chr22:15568037-15567907 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 96, 17 |
| Conread position: | 450-580 |
| Cow position: | chr22:18021054-18020925 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 450-581 |
| Cow position: | chr22:6327791-6327658 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 450-581 |
| Cow position: | chr22:13300389-13300521 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 450-581 |
| Cow position: | chr22:33985822-33985693 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 96, 53 |
| Conread position: | 450-582 |
| Cow position: | chr22:2109648-2109516 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 96, 17 |
| Conread position: | 450-582 |
| Cow position: | chr22:3317099-3317231 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 450-582 |
| Cow position: | chr22:4119584-4119451 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 450-582 |
| Cow position: | chr22:4163957-4164089 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 89, 43 |
| Conread position: | 450-582 |
| Cow position: | chr22:4315608-4315740 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 93, 56 |
| Conread position: | 450-582 |
| Cow position: | chr22:5616280-5616412 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 96, 120 |
| Conread position: | 450-582 |
| Cow position: | chr22:10532478-10532611 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 450-582 |
| Cow position: | chr22:14141364-14141231 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 450-582 |
| Cow position: | chr22:16094925-16094794 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 126, 95 |
| Conread position: | 450-582 |
| Cow position: | chr22:30253178-30253314 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 450-582 |
| Cow position: | chr22:31510402-31510267 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 450-584 |
| Cow position: | chr22:9171386-9171521 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 450-591 |
| Cow position: | chr22:12803407-12803266 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 90, 135 |
| Conread position: | 450-593 |
| Cow position: | chr22:21502723-21502865 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 450-594 |
| Cow position: | chr22:12902869-12902731 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 96, 48 |
| Conread position: | 450-594 |
| Cow position: | chr22:43119751-43119605 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 450-595 |
| Cow position: | chr22:36432992-36432848 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 96, 53 |
| Conread position: | 451-580 |
| Cow position: | chr22:42635453-42635324 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 451-582 |
| Cow position: | chr22:2100967-2100835 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 451-594 |
| Cow position: | chr22:1983827-1983974 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 452-594 |
| Cow position: | chr22:21295744-21295603 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 94, 56 |
| Conread position: | 452-594 |
| Cow position: | chr22:28071539-28071682 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 94, 80 |
| Conread position: | 453-580 |
| Cow position: | chr22:1591005-1591133 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 454-581 |
| Cow position: | chr22:4060965-4060837 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 454-583 |
| Cow position: | chr22:21235449-21235320 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 454-584 |
| Cow position: | chr22:43397984-43398113 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 86, 109 |
| Conread position: | 455-594 |
| Cow position: | chr22:44741059-44741199 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 456-579 |
| Cow position: | chr22:29290155-29290036 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 456-594 |
| Cow position: | chr22:9127392-9127530 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 90, 131 |
| Conread position: | 456-595 |
| Cow position: | chr22:17294952-17294814 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 90, 122 |
| Conread position: | 456-603 |
| Cow position: | chr22:21355157-21355009 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 457-581 |
| Cow position: | chr22:16813783-16813906 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 89, 65 |
| Conread position: | 457-582 |
| Cow position: | chr22:7584251-7584130 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 88, 46 |
| Conread position: | 457-582 |
| Cow position: | chr22:44717701-44717832 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 458-582 |
| Cow position: | chr22:40789552-40789676 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.