Cow genome map

Conread name: Ss1.1-Pig3-SRG8024K03.3

Conread position: 447-580
Cow position: chr5:9894119-9893985 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 447-580
Cow position: chr5:23168822-23168688 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 447-581
Cow position: chr5:3582564-3582699 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 447-581
Cow position: chr5:43402909-43403042 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 99, 116

Conread position: 447-581
Cow position: chr5:64027015-64026880 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 447-582
Cow position: chr5:66257643-66257778 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 99, 56

Conread position: 448-572
Cow position: chr5:57935103-57934978 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 448-580
Cow position: chr5:62172418-62172549 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 92, 6

Conread position: 448-582
Cow position: chr5:17602195-17602065 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 92, 18

Conread position: 448-582
Cow position: chr5:30276695-30276830 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 123

Conread position: 448-582
Cow position: chr5:43929730-43929596 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 98, 37

Conread position: 448-582
Cow position: chr5:56877486-56877622 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 56

Conread position: 448-583
Cow position: chr5:35826607-35826742 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 122

Conread position: 448-584
Cow position: chr5:69636229-69636366 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 448-594
Cow position: chr5:45187112-45186969 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 448-594
Cow position: chr5:60183808-60183955 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 138

Conread position: 448-594
Cow position: chr5:69337825-69337973 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 448-600
Cow position: chr5:11229667-11229516 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 87, 39

Conread position: 448-604
Cow position: chr5:21223329-21223486 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 92, 19

Conread position: 449-582
Cow position: chr5:12434549-12434683 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 450-570
Cow position: chr5:12169761-12169641 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 95, 28

Conread position: 450-574
Cow position: chr5:26549133-26549008 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 450-575
Cow position: chr5:69099727-69099853 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 450-580
Cow position: chr5:21617465-21617596 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 96, 0

Conread position: 450-581
Cow position: chr5:17087013-17086882 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 61

Conread position: 450-581
Cow position: chr5:50824599-50824731 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 450-581
Cow position: chr5:65752867-65752998 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 116

Conread position: 450-582
Cow position: chr5:4166649-4166780 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 450-582
Cow position: chr5:30253748-30253881 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 450-582
Cow position: chr5:30629152-30629017 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 76, 115

Conread position: 450-582
Cow position: chr5:34915046-34914913 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 450-582
Cow position: chr5:40109500-40109632 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 21

Conread position: 450-582
Cow position: chr5:44446859-44446725 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 450-582
Cow position: chr5:50600055-50600188 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 72, 8

Conread position: 450-582
Cow position: chr5:66366517-66366655 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 96, 61

Conread position: 450-583
Cow position: chr5:61102722-61102857 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 31

Conread position: 450-584
Cow position: chr5:6045301-6045438 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 450-589
Cow position: chr5:56517111-56517252 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 59

Conread position: 450-590
Cow position: chr5:44028296-44028160 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 96, 54

Conread position: 450-590
Cow position: chr5:69461340-69461484 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 90

Conread position: 450-594
Cow position: chr5:20288256-20288107 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 450-594
Cow position: chr5:22795224-22795365 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 96, 53

Conread position: 450-594
Cow position: chr5:45845684-45845535 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 111

Conread position: 450-594
Cow position: chr5:56339014-56338870 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 90, 135

Conread position: 450-595
Cow position: chr5:42050560-42050707 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 96, 19

Conread position: 450-620
Cow position: chr5:29903516-29903346 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 95, 161

Conread position: 451-580
Cow position: chr5:69383263-69383392 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 119

Conread position: 451-581
Cow position: chr5:35982730-35982598 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 451-581
Cow position: chr5:59626963-59626833 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 110
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 95, 106

Conread position: 451-589
Cow position: chr5:50821791-50821930 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 452-581
Cow position: chr5:56070868-56070998 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 452-582
Cow position: chr5:9233980-9233848 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 94, 0

Conread position: 454-580
Cow position: chr5:38168905-38169033 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 454-581
Cow position: chr5:44726323-44726195 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 454-582
Cow position: chr5:49342038-49341909 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 454-582
Cow position: chr5:57686726-57686597 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 454-585
Cow position: chr5:46512757-46512626 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 72

Conread position: 454-594
Cow position: chr5:35647354-35647494 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 92, 133

Conread position: 455-582
Cow position: chr5:55942367-55942239 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 456-576
Cow position: chr5:45804073-45804194 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 456-576
Cow position: chr5:75228186-75228065 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 456-579
Cow position: chr5:12351794-12351672 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 456-582
Cow position: chr5:45397586-45397709 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 93, 52

Conread position: 456-582
Cow position: chr5:57074318-57074191 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 456-594
Cow position: chr5:2240976-2240840 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 35

Conread position: 456-594
Cow position: chr5:43992337-43992475 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 131

Conread position: 467-591
Cow position: chr5:35190134-35190260 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 0

Show alignments to all cow chromosomes.