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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8025J04.5
        

               
Conread position:
               
21-504
               

               
Cow position:
               
chr17:12109132-12108628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
52-554
               

               
Cow position:
               
chr17:15684792-15684278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 28
               

               
Conread position:
               
54-543
               

               
Cow position:
               
chr17:21738576-21739100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 35
               

               
Conread position:
               
56-446
               

               
Cow position:
               
chr17:20884814-20884402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
58-583
               

               
Cow position:
               
chr17:13940037-13940578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 51
               

               
Conread position:
               
60-584
               

               
Cow position:
               
chr17:18202041-18201520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
64-251
               

               
Cow position:
               
chr17:27606791-27606601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
145, 40
               

               
Conread position:
               
66-525
               

               
Cow position:
               
chr17:24490821-24490323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
47, 71
               

               
Conread position:
               
66-554
               

               
Cow position:
               
chr17:15102614-15103115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 31
               

               
Conread position:
               
67-588
               

               
Cow position:
               
chr17:20234473-20233966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 68
               

               
Conread position:
               
68-504
               

               
Cow position:
               
chr17:24149459-24149002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
95, 27
               

               
Conread position:
               
68-579
               

               
Cow position:
               
chr17:22775645-22775140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
68-579
               

               
Cow position:
               
chr17:32027170-32027714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 463
               

               
Conread position:
               
68-584
               

               
Cow position:
               
chr17:27795927-27795391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
68, 22
               

               
Conread position:
               
68-588
               

               
Cow position:
               
chr17:11381452-11381976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 9
               

               
Conread position:
               
69-306
               

               
Cow position:
               
chr17:20929517-20929270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 35
               

               
Conread position:
               
69-372
               

               
Cow position:
               
chr17:18934536-18934214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 69
               

               
Conread position:
               
69-488
               

               
Cow position:
               
chr17:28468399-28467977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
29, 195
               

               
Conread position:
               
69-581
               

               
Cow position:
               
chr17:18720178-18720698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
40, 8
               

               
Conread position:
               
69-581
               

               
Cow position:
               
chr17:24077669-24077152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
69-587
               

               
Cow position:
               
chr17:20992762-20993300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 214
               

               
Conread position:
               
69-588
               

               
Cow position:
               
chr17:13922759-13922217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 119
               

               
Conread position:
               
69-588
               

               
Cow position:
               
chr17:20032635-20033175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 28
               

               
Conread position:
               
70-263
               

               
Cow position:
               
chr17:20881545-20881737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
146, 33
               

               
Conread position:
               
70-587
               

               
Cow position:
               
chr17:4601284-4601803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 89
               

               
Conread position:
               
70-588
               

               
Cow position:
               
chr17:18490809-18490275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
71-484
               

               
Cow position:
               
chr17:9965753-9966188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
64, 20
               

               
Conread position:
               
72-371
               

               
Cow position:
               
chr17:25800615-25800924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
72-385
               

               
Cow position:
               
chr17:33154889-33155210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
72-463
               

               
Cow position:
               
chr17:26233557-26233964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
73-308
               

               
Cow position:
               
chr17:13414092-13414341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
73-426
               

               
Cow position:
               
chr17:14652513-14652881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
22, 64
               

               
Conread position:
               
73-513
               

               
Cow position:
               
chr17:25612359-25611909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 282
               

               
Conread position:
               
74-444
               

               
Cow position:
               
chr17:32349332-32348955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
61, 109
               

               
Conread position:
               
74-580
               

               
Cow position:
               
chr17:17059689-17059187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 113
               

               
Conread position:
               
74-588
               

               
Cow position:
               
chr17:5280381-5280903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 214
               

               
Conread position:
               
75-579
               

               
Cow position:
               
chr17:6156304-6155789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
34, 62
               

               
Conread position:
               
76-376
               

               
Cow position:
               
chr17:34790798-34791112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
76-426
               

               
Cow position:
               
chr17:21325599-21325232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
19, 44
               

               
Conread position:
               
76-534
               

               
Cow position:
               
chr17:1035326-1035811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
76-580
               

               
Cow position:
               
chr17:5224644-5224150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 53
               

               
Conread position:
               
78-483
               

               
Cow position:
               
chr17:4968346-4967956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
78-558
               

               
Cow position:
               
chr17:32418852-32419350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
78-588
               

               
Cow position:
               
chr17:25189551-25189022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
79-580
               

               
Cow position:
               
chr17:33288396-33288907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 25
               

               
Conread position:
               
79-585
               

               
Cow position:
               
chr17:21959415-21959937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 375
               

               
Conread position:
               
79-588
               

               
Cow position:
               
chr17:32989735-32989232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 18
               

               
Conread position:
               
79-588
               

               
Cow position:
               
chr17:32993364-32993874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 25
               

               
Conread position:
               
80-460
               

               
Cow position:
               
chr17:40673638-40673251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 252
               

               
Conread position:
               
80-588
               

               
Cow position:
               
chr17:38615226-38614699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
81-317
               

               
Cow position:
               
chr17:7959442-7959198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
81-381
               

               
Cow position:
               
chr17:37815929-37816241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
81-511
               

               
Cow position:
               
chr17:3577792-3577356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
81-521
               

               
Cow position:
               
chr17:20071842-20072267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
100, 34
               

               
Conread position:
               
81-584
               

               
Cow position:
               
chr17:11839986-11839444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 145
               

               
Conread position:
               
81-584
               

               
Cow position:
               
chr17:14004085-14003572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
81-588
               

               
Cow position:
               
chr17:5731180-5730663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
54, 250
               

               
Conread position:
               
81-588
               

               
Cow position:
               
chr17:11618847-11618319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 32
               

               
Conread position:
               
81-588
               

               
Cow position:
               
chr17:17951496-17950982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
18, 52
               

               
Conread position:
               
81-588
               

               
Cow position:
               
chr17:25901470-25900938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 381
               

               
Conread position:
               
82-296
               

               
Cow position:
               
chr17:21718737-21718958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
53, 22
               

               
Conread position:
               
82-372
               

               
Cow position:
               
chr17:21039820-21039521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
19, 289
               

               
Conread position:
               
82-470
               

               
Cow position:
               
chr17:24928737-24928338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 15
               

               
Conread position:
               
82-486
               

               
Cow position:
               
chr17:18146449-18146025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
53, 28
               

               
Conread position:
               
82-539
               

               
Cow position:
               
chr17:40741913-40741435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 15
               

               
Conread position:
               
82-542
               

               
Cow position:
               
chr17:33793412-33792967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
128, 15
               

               
Conread position:
               
82-546
               

               
Cow position:
               
chr17:12325504-12325965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 106
               

               
Conread position:
               
83-480
               

               
Cow position:
               
chr17:3468008-3467618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
52, 21
               

               
Conread position:
               
83-554
               

               
Cow position:
               
chr17:7698306-7697829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 52
               

               
Conread position:
               
83-581
               

               
Cow position:
               
chr17:40772090-40771574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 176
               

               
Conread position:
               
83-588
               

               
Cow position:
               
chr17:6936418-6936925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 16
               

               
Conread position:
               
83-588
               

               
Cow position:
               
chr17:10528470-10529002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
52, 116
               

               
Conread position:
               
83-588
               

               
Cow position:
               
chr17:21972866-21973392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
84-365
               

               
Cow position:
               
chr17:17044078-17044369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
51, 7
               

               
Conread position:
               
84-517
               

               
Cow position:
               
chr17:21599421-21599870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
51, 241
               

               
Conread position:
               
84-588
               

               
Cow position:
               
chr17:15664938-15664408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 146
               

               
Conread position:
               
85-376
               

               
Cow position:
               
chr17:25126598-25126306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
50, 24
               

               
Conread position:
               
85-426
               

               
Cow position:
               
chr17:25616502-25616158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
24, 10
               

               
Conread position:
               
85-489
               

               
Cow position:
               
chr17:26631547-26631976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
24, 178
               

               
Conread position:
               
85-493
               

               
Cow position:
               
chr17:12306146-12306560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
50, 24
               

               
Conread position:
               
85-547
               

               
Cow position:
               
chr17:24786768-24787241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
85-588
               

               
Cow position:
               
chr17:32138153-32138658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 291
               

               
Conread position:
               
86-327
               

               
Cow position:
               
chr17:29995178-29995428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
86-347
               

               
Cow position:
               
chr17:8815444-8815173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
49, 100
               

               
Conread position:
               
86-413
               

               
Cow position:
               
chr17:25342484-25342828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
49, 18
               

               
Conread position:
               
86-458
               

               
Cow position:
               
chr17:6318611-6318990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
49, 224
               

               
Conread position:
               
86-554
               

               
Cow position:
               
chr17:6424012-6423534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 84
               

               
Conread position:
               
86-588
               

               
Cow position:
               
chr17:16446169-16446690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 311
               

               
Conread position:
               
86-588
               

               
Cow position:
               
chr17:20801072-20800555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 49
               

               
Conread position:
               
87-329
               

               
Cow position:
               
chr17:40276992-40276746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
87-463
               

               
Cow position:
               
chr17:32280924-32280531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 163
               

               
Conread position:
               
87-536
               

               
Cow position:
               
chr17:32278648-32279116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
48, 163
               

               
Conread position:
               
87-543
               

               
Cow position:
               
chr17:8836695-8837157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
80, 49
               

               
Conread position:
               
87-584
               

               
Cow position:
               
chr17:11277772-11278279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
76, 10
               

               
Conread position:
               
87-584
               

               
Cow position:
               
chr17:31480773-31481296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
87-588
               

               
Cow position:
               
chr17:24824502-24824004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 47
               

               
Conread position:
               
88-329
               

               
Cow position:
               
chr17:43315035-43315280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
75, 46
               

               
Conread position:
               
88-330
               

               
Cow position:
               
chr17:21466001-21466257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 242
               

               
Conread position:
               
88-548
               

               
Cow position:
               
chr17:22564435-22563966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
88-581
               

               
Cow position:
               
chr17:12289154-12289673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
88-588
               

               
Cow position:
               
chr17:29084422-29083945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 48
               

               
Conread position:
               
89-572
               

               
Cow position:
               
chr17:11101565-11102039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 8
               

               
Conread position:
               
89-588
               

               
Cow position:
               
chr17:9854237-9853725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 176
               

               
Conread position:
               
90-347
               

               
Cow position:
               
chr17:9932058-9932319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
43, 121
               

               
Conread position:
               
90-517
               

               
Cow position:
               
chr17:33275508-33275934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
90-584
               

               
Cow position:
               
chr17:14033389-14033904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
91-332
               

               
Cow position:
               
chr17:42150640-42150395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
44, 240
               

               
Conread position:
               
91-376
               

               
Cow position:
               
chr17:39606675-39606384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
18, 46
               

               
Conread position:
               
91-404
               

               
Cow position:
               
chr17:9824919-9824590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
91-491
               

               
Cow position:
               
chr17:27058296-27058715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
24, 351
               

               
Conread position:
               
91-535
               

               
Cow position:
               
chr17:21243556-21243994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 76
               

               
Conread position:
               
91-553
               

               
Cow position:
               
chr17:7810496-7810965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
91-554
               

               
Cow position:
               
chr17:27274819-27274335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
72, 13
               

               
Conread position:
               
91-570
               

               
Cow position:
               
chr17:21870472-21870981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
91-588
               

               
Cow position:
               
chr17:20022263-20022778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
91-588
               

               
Cow position:
               
chr17:40332031-40331508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 7
               

               
Conread position:
               
92-352
               

               
Cow position:
               
chr17:25473029-25473302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
94-546
               

               
Cow position:
               
chr17:25128104-25128568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 303
               

               
Conread position:
               
95-554
               

               
Cow position:
               
chr17:9697436-9697928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
83, 18
               

               
Conread position:
               
95-554
               

               
Cow position:
               
chr17:17410548-17410071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 382
               

               
Conread position:
               
96-587
               

               
Cow position:
               
chr17:40312947-40312468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
19, 90
               

               
Conread position:
               
97-520
               

               
Cow position:
               
chr17:26000368-25999925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
12, 168
               

               
Conread position:
               
97-581
               

               
Cow position:
               
chr17:14025660-14026169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
26, 396
               

               
Conread position:
               
98-323
               

               
Cow position:
               
chr17:17035192-17034961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 62
               

               
Conread position:
               
98-347
               

               
Cow position:
               
chr17:1025588-1025837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
98-393
               

               
Cow position:
               
chr17:40639192-40638882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
98-425
               

               
Cow position:
               
chr17:35573992-35573663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 57
               

               
Conread position:
               
98-483
               

               
Cow position:
               
chr17:31037132-31037534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 28
               

               
Conread position:
               
98-493
               

               
Cow position:
               
chr17:4105746-4106150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
98-493
               

               
Cow position:
               
chr17:4121481-4121886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
98-500
               

               
Cow position:
               
chr17:12447156-12447570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
17, 92
               

               
Conread position:
               
98-501
               

               
Cow position:
               
chr17:1634248-1634654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 268
               

               
Conread position:
               
98-525
               

               
Cow position:
               
chr17:1256250-1256702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
11, 307
               

               
Conread position:
               
98-543
               

               
Cow position:
               
chr17:30713591-30713137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 350
               

               
Conread position:
               
98-547
               

               
Cow position:
               
chr17:11831873-11832356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 72
               

               
Conread position:
               
98-553
               

               
Cow position:
               
chr17:20157853-20157391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 173
               

               
Conread position:
               
98-564
               

               
Cow position:
               
chr17:23246431-23245974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
98-581
               

               
Cow position:
               
chr17:25875643-25875154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
11, 205
               

               
Conread position:
               
98-584
               

               
Cow position:
               
chr17:11215648-11216137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 150
               

               
Conread position:
               
98-584
               

               
Cow position:
               
chr17:29292143-29292623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
98-588
               

               
Cow position:
               
chr17:924105-923619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 21
               

               
Conread position:
               
99-330
               

               
Cow position:
               
chr17:26574978-26575223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
36, 236
               

               
Conread position:
               
99-347
               

               
Cow position:
               
chr17:3153324-3153588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 151
               

               
Conread position:
               
99-483
               

               
Cow position:
               
chr17:5143928-5144322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
34, 82
               

               
Conread position:
               
99-524
               

               
Cow position:
               
chr17:908985-908551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
99-549
               

               
Cow position:
               
chr17:34948881-34948418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 189
               

               
Conread position:
               
99-578
               

               
Cow position:
               
chr17:21003587-21004082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 160
               

               
Conread position:
               
99-588
               

               
Cow position:
               
chr17:24974190-24973689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 234
               

               
Conread position:
               
100-328
               

               
Cow position:
               
chr17:32332848-32333085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
100-329
               

               
Cow position:
               
chr17:37340788-37341031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
100-423
               

               
Cow position:
               
chr17:25513874-25514221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
15, 219
               

               
Conread position:
               
100-493
               

               
Cow position:
               
chr17:10037655-10037279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
10, 66
               

               
Conread position:
               
100-550
               

               
Cow position:
               
chr17:41289800-41290240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
9, 85
               

               
Conread position:
               
100-573
               

               
Cow position:
               
chr17:20780768-20780264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 362
               

               
Conread position:
               
100-584
               

               
Cow position:
               
chr17:20090385-20090875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 239
               

               
Conread position:
               
100-588
               

               
Cow position:
               
chr17:2810874-2810354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
63, 16
               

               
Conread position:
               
100-588
               

               
Cow position:
               
chr17:24883327-24883826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 318
               

               
Conread position:
               
100-588
               

               
Cow position:
               
chr17:26818228-26818713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
101-544
               

               
Cow position:
               
chr17:32471547-32472008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
101-562
               

               
Cow position:
               
chr17:5898282-5898759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
101-580
               

               
Cow position:
               
chr17:13243812-13244279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
101-581
               

               
Cow position:
               
chr17:20092887-20093378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
32, 155
               

               
Conread position:
               
101-588
               

               
Cow position:
               
chr17:33933506-33934007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 110
               

               
Conread position:
               
102-292
               

               
Cow position:
               
chr17:10016519-10016322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
102-441
               

               
Cow position:
               
chr17:40250652-40250308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 67
               

               
Conread position:
               
102-464
               

               
Cow position:
               
chr17:30728749-30728382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
7, 96
               

               
Conread position:
               
102-568
               

               
Cow position:
               
chr17:11664335-11664829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 390
               

               
Conread position:
               
103-567
               

               
Cow position:
               
chr17:44146733-44147212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
30, 405
               

               
Conread position:
               
104-491
               

               
Cow position:
               
chr17:1562552-1562936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
31, 86
               

               
Conread position:
               
104-537
               

               
Cow position:
               
chr17:20932568-20932126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
104-547
               

               
Cow position:
               
chr17:24587862-24587398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 350
               

               
Conread position:
               
104-588
               

               
Cow position:
               
chr17:17222583-17222083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 229
               

               
Conread position:
               
104-588
               

               
Cow position:
               
chr17:22032449-22032944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 233
               

               
Conread position:
               
104-588
               

               
Cow position:
               
chr17:25608278-25608767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 60
               

               
Conread position:
               
105-588
               

               
Cow position:
               
chr17:26231203-26230678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 183
               

               
Conread position:
               
106-521
               

               
Cow position:
               
chr17:5514994-5514567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
29, 104
               

               
Conread position:
               
112-440
               

               
Cow position:
               
chr17:23563581-23563904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
23, 49
               

               
Conread position:
               
112-517
               

               
Cow position:
               
chr17:12536243-12536656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
113-466
               

               
Cow position:
               
chr17:31581700-31581343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
22, 174
               

               
Conread position:
               
113-554
               

               
Cow position:
               
chr17:5422848-5423298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 52
               

               
Conread position:
               
113-588
               

               
Cow position:
               
chr17:23100992-23101468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 201
               

               
Conread position:
               
113-588
               

               
Cow position:
               
chr17:28284806-28285284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 23
               

               
Conread position:
               
113-588
               

               
Cow position:
               
chr17:30529317-30529797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 338
               

               
Conread position:
               
114-371
               

               
Cow position:
               
chr17:5372303-5372571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
21, 71
               

               
Conread position:
               
114-430
               

               
Cow position:
               
chr17:1040957-1040640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
19, 58
               

               
Conread position:
               
114-452
               

               
Cow position:
               
chr17:4299713-4300045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
21, 100
               

               
Conread position:
               
114-490
               

               
Cow position:
               
chr17:25917115-25916731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
133, 19
               

               
Conread position:
               
114-497
               

               
Cow position:
               
chr17:7143086-7142695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
21, 336
               

               
Conread position:
               
114-512
               

               
Cow position:
               
chr17:10458705-10459119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
114-534
               

               
Cow position:
               
chr17:27429785-27429371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
114-536
               

               
Cow position:
               
chr17:10447142-10446707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
21, 203
               

               
Conread position:
               
114-577
               

               
Cow position:
               
chr17:5000372-5000824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 90
               

               
Conread position:
               
114-581
               

               
Cow position:
               
chr17:1783397-1783860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 93
               

               
Conread position:
               
114-587
               

               
Cow position:
               
chr17:43717111-43717568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
114-588
               

               
Cow position:
               
chr17:11296868-11296377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 79
               

               
Conread position:
               
114-588
               

               
Cow position:
               
chr17:11397896-11397409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
21, 131
               

               
Conread position:
               
114-588
               

               
Cow position:
               
chr17:18860515-18860979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 7
               

               
Conread position:
               
114-588
               

               
Cow position:
               
chr17:25815824-25815347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
114-588
               

               
Cow position:
               
chr17:26514944-26514454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 72
               

               
Conread position:
               
114-588
               

               
Cow position:
               
chr17:29714985-29715447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 20
               

               
Conread position:
               
115-424
               

               
Cow position:
               
chr17:11912277-11912596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
20, 255
               

               
Conread position:
               
115-490
               

               
Cow position:
               
chr17:21414602-21415000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
115-490
               

               
Cow position:
               
chr17:21437085-21437483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
115-513
               

               
Cow position:
               
chr17:1063396-1063005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
115-537
               

               
Cow position:
               
chr17:11362404-11361973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
115-543
               

               
Cow position:
               
chr17:24004601-24004179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 252
               

               
Conread position:
               
115-583
               

               
Cow position:
               
chr17:6566712-6566220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
20, 116
               

               
Conread position:
               
115-584
               

               
Cow position:
               
chr17:12929300-12929800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
116-584
               

               
Cow position:
               
chr17:15187842-15188332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
116-588
               

               
Cow position:
               
chr17:36330740-36331227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 47
               

               
Conread position:
               
117-476
               

               
Cow position:
               
chr17:6329338-6328961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
117-501
               

               
Cow position:
               
chr17:18419911-18419501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 77
               

               
Conread position:
               
117-555
               

               
Cow position:
               
chr17:39771628-39771168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
18, 291
               

               
Conread position:
               
118-352
               

               
Cow position:
               
chr17:12959327-12959082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
118-588
               

               
Cow position:
               
chr17:21114730-21115206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 328
               

               
Conread position:
               
122-431
               

               
Cow position:
               
chr17:40852189-40851876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
126-578
               

               
Cow position:
               
chr17:18473380-18472932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 149
               

               
Conread position:
               
126-579
               

               
Cow position:
               
chr17:19999334-19998883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
78, 138
               

               
Conread position:
               
133-541
               

               
Cow position:
               
chr17:5768108-5767700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 51
               

               
Conread position:
               
137-582
               

               
Cow position:
               
chr17:14248808-14249288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 152
               

               
Conread position:
               
140-543
               

               
Cow position:
               
chr17:12219744-12220154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
69, 28
               

               
Conread position:
               
140-543
               

               
Cow position:
               
chr17:25097655-25097247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 142
               

               
Conread position:
               
140-588
               

               
Cow position:
               
chr17:34078906-34079359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 225
               

               
Conread position:
               
142-581
               

               
Cow position:
               
chr17:18108886-18109340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 119
               

               
Conread position:
               
143-540
               

               
Cow position:
               
chr17:4225306-4225704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
147-574
               

               
Cow position:
               
chr17:18495324-18495754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
23, 114
               

               
Conread position:
               
158-578
               

               
Cow position:
               
chr17:1492970-1493407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
161-414
               

               
Cow position:
               
chr17:27202868-27203133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
161-528
               

               
Cow position:
               
chr17:32273511-32273883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
58, 24
               

               
Conread position:
               
161-539
               

               
Cow position:
               
chr17:11280922-11281319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
48, 308
               

               
Conread position:
               
161-547
               

               
Cow position:
               
chr17:32553879-32554243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
49, 9
               

               
Conread position:
               
161-551
               

               
Cow position:
               
chr17:2662599-2662185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
59, 45
               

               
Conread position:
               
161-562
               

               
Cow position:
               
chr17:15340574-15340964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
48, 274
               

               
Conread position:
               
161-581
               

               
Cow position:
               
chr17:24554171-24553750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
162-554
               

               
Cow position:
               
chr17:9746688-9746294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
162-558
               

               
Cow position:
               
chr17:30665446-30665043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 44
               

               
Conread position:
               
162-588
               

               
Cow position:
               
chr17:8079489-8079056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 297
               

               
Conread position:
               
164-523
               

               
Cow position:
               
chr17:24822036-24821675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
46, 122
               

               
Conread position:
               
165-588
               

               
Cow position:
               
chr17:38833217-38832781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 288
               

               
Conread position:
               
166-588
               

               
Cow position:
               
chr17:1410064-1410507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
166-588
               

               
Cow position:
               
chr17:8544476-8544047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 23
               

               
Conread position:
               
170-510
               

               
Cow position:
               
chr17:265837-265475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
170-513
               

               
Cow position:
               
chr17:9911926-9911579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
40, 87
               

               
Conread position:
               
171-543
               

               
Cow position:
               
chr17:17406303-17405922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
171-554
               

               
Cow position:
               
chr17:35126871-35126487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
64, 14
               

               
Conread position:
               
173-414
               

               
Cow position:
               
chr17:23516777-23517031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 27
               

               
Conread position:
               
173-588
               

               
Cow position:
               
chr17:29157582-29157169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 85
               

               
Conread position:
               
174-551
               

               
Cow position:
               
chr17:27048320-27047939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
35, 78
               

               
Conread position:
               
185-502
               

               
Cow position:
               
chr17:20990036-20990367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
25, 110
               

               
Conread position:
               
185-523
               

               
Cow position:
               
chr17:12591328-12590969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 201
               

               
Conread position:
               
185-572
               

               
Cow position:
               
chr17:22806389-22806780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
25, 114
               

               
Conread position:
               
185-588
               

               
Cow position:
               
chr17:26765176-26764756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 5
               

               
Conread position:
               
185-588
               

               
Cow position:
               
chr17:41030091-41029691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
186-542
               

               
Cow position:
               
chr17:24580142-24580514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
23, 53
               

               
Conread position:
               
187-443
               

               
Cow position:
               
chr17:33657917-33658190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
189-581
               

               
Cow position:
               
chr17:9565450-9565055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 64
               

               
Conread position:
               
189-588
               

               
Cow position:
               
chr17:7760323-7760731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
189-588
               

               
Cow position:
               
chr17:30539120-30539510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
190-532
               

               
Cow position:
               
chr17:41891913-41892276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
17, 228
               

               
Conread position:
               
194-520
               

               
Cow position:
               
chr17:5006346-5006682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
194-539
               

               
Cow position:
               
chr17:30236337-30236016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
196-552
               

               
Cow position:
               
chr17:37481930-37482313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
198-556
               

               
Cow position:
               
chr17:21426100-21425734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
210-588
               

               
Cow position:
               
chr17:4338936-4339317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 146
               

               
Conread position:
               
219-536
               

               
Cow position:
               
chr17:38647177-38646859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
106, 220
               

               
Conread position:
               
219-538
               

               
Cow position:
               
chr17:31231007-31231325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
98, 29
               

               
Conread position:
               
219-540
               

               
Cow position:
               
chr17:1020445-1020780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
219-543
               

               
Cow position:
               
chr17:11156378-11156709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
106, 32
               

               
Conread position:
               
219-553
               

               
Cow position:
               
chr17:11172499-11172842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
98, 249
               

               
Conread position:
               
219-555
               

               
Cow position:
               
chr17:21755319-21755667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
108, 33
               

               
Conread position:
               
219-557
               

               
Cow position:
               
chr17:1568058-1568406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 33
               

               
Conread position:
               
219-581
               

               
Cow position:
               
chr17:34596056-34595690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 318
               

               
Conread position:
               
219-583
               

               
Cow position:
               
chr17:28540144-28539771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
90, 36
               

               
Conread position:
               
219-588
               

               
Cow position:
               
chr17:979051-979395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
115, 33
               

               
Conread position:
               
219-588
               

               
Cow position:
               
chr17:10473963-10473574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 256
               

               
Conread position:
               
219-588
               

               
Cow position:
               
chr17:20126713-20126360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
130, 38
               

               
Conread position:
               
219-588
               

               
Cow position:
               
chr17:20824204-20824586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
39, 45
               

               
Conread position:
               
219-588
               

               
Cow position:
               
chr17:25796221-25796601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
219-588
               

               
Cow position:
               
chr17:32651731-32651355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 31
               

               
Conread position:
               
219-588
               

               
Cow position:
               
chr17:36197742-36197360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 147
               

               
Conread position:
               
220-506
               

               
Cow position:
               
chr17:12269795-12270092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 137
               

               
Conread position:
               
220-553
               

               
Cow position:
               
chr17:34316601-34316936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
220-584
               

               
Cow position:
               
chr17:35287212-35287600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
220-588
               

               
Cow position:
               
chr17:3782158-3781775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
117, 33
               

               
Conread position:
               
221-410
               

               
Cow position:
               
chr17:21758027-21758223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
221-426
               

               
Cow position:
               
chr17:35338807-35339016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
128, 92
               

               
Conread position:
               
221-547
               

               
Cow position:
               
chr17:20216280-20215952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
221-571
               

               
Cow position:
               
chr17:17060568-17060929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 199
               

               
Conread position:
               
221-578
               

               
Cow position:
               
chr17:27142859-27142503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
59, 33
               

               
Conread position:
               
221-581
               

               
Cow position:
               
chr17:4213857-4213503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
221-583
               

               
Cow position:
               
chr17:30718304-30718672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
120, 238
               

               
Conread position:
               
221-584
               

               
Cow position:
               
chr17:3683556-3683914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
129, 48
               

               
Conread position:
               
221-587
               

               
Cow position:
               
chr17:19891738-19891355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
34, 30
               

               
Conread position:
               
221-588
               

               
Cow position:
               
chr17:11171906-11171535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
221-588
               

               
Cow position:
               
chr17:21495485-21495116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 26
               

               
Conread position:
               
221-588
               

               
Cow position:
               
chr17:23063833-23063453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
83, 36
               

               
Conread position:
               
221-588
               

               
Cow position:
               
chr17:25181034-25181407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
92, 15
               

               
Conread position:
               
221-588
               

               
Cow position:
               
chr17:32457456-32457841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
221-588
               

               
Cow position:
               
chr17:39736288-39735925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 48
               

               
Conread position:
               
222-532
               

               
Cow position:
               
chr17:21628591-21628277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
105, 47
               

               
Conread position:
               
224-539
               

               
Cow position:
               
chr17:1275634-1275307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
92, 29
               

               
Conread position:
               
224-588
               

               
Cow position:
               
chr17:18592553-18592177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 139
               

               
Conread position:
               
224-588
               

               
Cow position:
               
chr17:25541706-25542073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 152
               

               
Conread position:
               
225-521
               

               
Cow position:
               
chr17:37479892-37480185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
92, 49
               

               
Conread position:
               
225-573
               

               
Cow position:
               
chr17:552860-553210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
124, 78
               

               
Conread position:
               
225-588
               

               
Cow position:
               
chr17:9117754-9117382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 216
               

               
Conread position:
               
225-588
               

               
Cow position:
               
chr17:40288890-40289261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 351
               

               
Conread position:
               
226-588
               

               
Cow position:
               
chr17:3503690-3503317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
226-588
               

               
Cow position:
               
chr17:40421780-40421408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 186
               

               
Conread position:
               
228-497
               

               
Cow position:
               
chr17:21917766-21918042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
60, 100
               

               
Conread position:
               
228-526
               

               
Cow position:
               
chr17:21434624-21434928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
106, 40
               

               
Conread position:
               
228-548
               

               
Cow position:
               
chr17:38200656-38200987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
58, 47
               

               
Conread position:
               
228-563
               

               
Cow position:
               
chr17:25335286-25335620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
99, 208
               

               
Conread position:
               
228-573
               

               
Cow position:
               
chr17:16371363-16371004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 211
               

               
Conread position:
               
228-581
               

               
Cow position:
               
chr17:37163424-37163783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 92
               

               
Conread position:
               
228-584
               

               
Cow position:
               
chr17:2584806-2584444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
49, 216
               

               
Conread position:
               
228-584
               

               
Cow position:
               
chr17:5281190-5281558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
49, 283
               

               
Conread position:
               
228-584
               

               
Cow position:
               
chr17:20889478-20889118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 44
               

               
Conread position:
               
228-585
               

               
Cow position:
               
chr17:139769-139404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
50, 40
               

               
Conread position:
               
228-588
               

               
Cow position:
               
chr17:17121778-17121415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
101, 199
               

               
Conread position:
               
228-588
               

               
Cow position:
               
chr17:18098937-18099299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
42, 56
               

               
Conread position:
               
228-588
               

               
Cow position:
               
chr17:21335585-21335959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
228-588
               

               
Cow position:
               
chr17:25076721-25077086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 66
               

               
Conread position:
               
228-588
               

               
Cow position:
               
chr17:43141602-43141981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
92, 230
               

               
Conread position:
               
229-481
               

               
Cow position:
               
chr17:31701537-31701285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
118, 81
               

               
Conread position:
               
232-529
               

               
Cow position:
               
chr17:3152221-3152525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
85, 63
               

               
Conread position:
               
232-543
               

               
Cow position:
               
chr17:7437270-7436950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
91, 7
               

               
Conread position:
               
232-581
               

               
Cow position:
               
chr17:20083419-20083766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
54, 62
               

               
Conread position:
               
232-581
               

               
Cow position:
               
chr17:32366390-32366032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 55
               

               
Conread position:
               
232-588
               

               
Cow position:
               
chr17:256175-255815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
75, 55
               

               
Conread position:
               
232-588
               

               
Cow position:
               
chr17:28129940-28130301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
97, 286
               

               
Conread position:
               
232-588
               

               
Cow position:
               
chr17:36499475-36499839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
97, 133
               

               
Conread position:
               
232-588
               

               
Cow position:
               
chr17:39790800-39790425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
23, 33
               

               
Conread position:
               
233-506
               

               
Cow position:
               
chr17:21299255-21299535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 125
               

               
Conread position:
               
234-587
               

               
Cow position:
               
chr17:12356809-12357173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 54
               

               
Conread position:
               
235-581
               

               
Cow position:
               
chr17:21620822-21620460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 96
               

               
Conread position:
               
239-562
               

               
Cow position:
               
chr17:14848446-14848757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
82, 39
               

               
Conread position:
               
239-563
               

               
Cow position:
               
chr17:20870002-20870326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
30, 51
               

               
Conread position:
               
242-487
               

               
Cow position:
               
chr17:10020698-10020957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
13, 9
               

               
Conread position:
               
242-488
               

               
Cow position:
               
chr17:27549735-27549987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 25
               

               
Conread position:
               
249-554
               

               
Cow position:
               
chr17:15333624-15333937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
71, 191
               

               
Conread position:
               
250-547
               

               
Cow position:
               
chr17:8690357-8690660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
254-533
               

               
Cow position:
               
chr17:6624337-6624052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
72, 106
               

               
Conread position:
               
255-528
               

               
Cow position:
               
chr17:26224589-26224317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
255-588
               

               
Cow position:
               
chr17:7252116-7251781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
64, 68
               

               
Conread position:
               
256-580
               

               
Cow position:
               
chr17:14211886-14212221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 109
               

               
Conread position:
               
257-426
               

               
Cow position:
               
chr17:32009362-32009538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
63, 124
               

               
Conread position:
               
257-570
               

               
Cow position:
               
chr17:20839488-20839800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
92, 69
               

               
Conread position:
               
257-582
               

               
Cow position:
               
chr17:20081720-20082034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
262, 65
               

               
Conread position:
               
257-588
               

               
Cow position:
               
chr17:2006772-2006443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 112
               

               
Conread position:
               
257-588
               

               
Cow position:
               
chr17:2034607-2034289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 131
               

               
Conread position:
               
258-588
               

               
Cow position:
               
chr17:3511308-3511650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
258-588
               

               
Cow position:
               
chr17:8993209-8993551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
64, 107
               

               
Conread position:
               
262-584
               

               
Cow position:
               
chr17:12059020-12059353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
263-547
               

               
Cow position:
               
chr17:9778315-9778031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
86, 202
               

               
Conread position:
               
263-578
               

               
Cow position:
               
chr17:2266315-2265988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
61, 102
               

               
Conread position:
               
263-580
               

               
Cow position:
               
chr17:15243424-15243751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 119
               

               
Conread position:
               
263-580
               

               
Cow position:
               
chr17:35438170-35437841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 111
               

               
Conread position:
               
263-588
               

               
Cow position:
               
chr17:4479750-4480086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 101
               

               
Conread position:
               
263-588
               

               
Cow position:
               
chr17:8214364-8214027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
59, 102
               

               
Conread position:
               
263-588
               

               
Cow position:
               
chr17:9914684-9914347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
59, 111
               

               
Conread position:
               
263-588
               

               
Cow position:
               
chr17:21182624-21182287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
263-588
               

               
Cow position:
               
chr17:21439959-21439622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
73, 92
               

               
Conread position:
               
263-588
               

               
Cow position:
               
chr17:34235123-34235460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
264-494
               

               
Cow position:
               
chr17:10510586-10510827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
265-554
               

               
Cow position:
               
chr17:9079134-9079413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
92, 70
               

               
Conread position:
               
269-557
               

               
Cow position:
               
chr17:20561544-20561244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 96
               

               
Conread position:
               
271-588
               

               
Cow position:
               
chr17:19370339-19370668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 94
               

               
Conread position:
               
272-588
               

               
Cow position:
               
chr17:3306921-3306608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 37
               

               
Conread position:
               
274-580
               

               
Cow position:
               
chr17:1081054-1080751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
48, 163
               

               
Conread position:
               
275-588
               

               
Cow position:
               
chr17:5541506-5541832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 100
               

               
Conread position:
               
276-547
               

               
Cow position:
               
chr17:33402877-33403160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
30, 39
               

               
Conread position:
               
276-584
               

               
Cow position:
               
chr17:5255314-5255630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
49, 279
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr17:36268439-36268220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
128, 38
               

               
Conread position:
               
277-521
               

               
Cow position:
               
chr17:21697789-21697540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
277-553
               

               
Cow position:
               
chr17:5246953-5246674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
6, 106
               

               
Conread position:
               
277-581
               

               
Cow position:
               
chr17:20358924-20358624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
47, 85
               

               
Conread position:
               
277-584
               

               
Cow position:
               
chr17:1295513-1295828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 167
               

               
Conread position:
               
277-588
               

               
Cow position:
               
chr17:242696-242378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
42, 179
               

               
Conread position:
               
278-509
               

               
Cow position:
               
chr17:34207758-34208000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
49, 161
               

               
Conread position:
               
278-542
               

               
Cow position:
               
chr17:21323333-21323085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 81
               

               
Conread position:
               
278-581
               

               
Cow position:
               
chr17:25145267-25145564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
50, 28
               

               
Conread position:
               
279-558
               

               
Cow position:
               
chr17:33998995-33999275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 32
               

               
Conread position:
               
279-583
               

               
Cow position:
               
chr17:21494156-21494472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
57, 86
               

               
Conread position:
               
279-588
               

               
Cow position:
               
chr17:6613133-6612812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
43, 86
               

               
Conread position:
               
279-588
               

               
Cow position:
               
chr17:10319191-10318870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
57, 86
               

               
Conread position:
               
279-588
               

               
Cow position:
               
chr17:11677126-11677447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
280-584
               

               
Cow position:
               
chr17:16448375-16448077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
97, 65
               

               
Conread position:
               
280-588
               

               
Cow position:
               
chr17:42347169-42347482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
42, 132
               

               
Conread position:
               
281-485
               

               
Cow position:
               
chr17:10491580-10491367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
281-521
               

               
Cow position:
               
chr17:21207087-21207327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
68, 39
               

               
Conread position:
               
281-547
               

               
Cow position:
               
chr17:24761174-24761443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
41, 156
               

               
Conread position:
               
281-588
               

               
Cow position:
               
chr17:3471473-3471154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
41, 176
               

               
Conread position:
               
281-588
               

               
Cow position:
               
chr17:8223804-8223493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
10, 257
               

               
Conread position:
               
281-588
               

               
Cow position:
               
chr17:13143634-13143943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 175
               

               
Conread position:
               
281-588
               

               
Cow position:
               
chr17:36285370-36285051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 84
               

               
Conread position:
               
282-582
               

               
Cow position:
               
chr17:1653639-1653943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 157
               

               
Conread position:
               
283-537
               

               
Cow position:
               
chr17:966694-966949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
37, 49
               

               
Conread position:
               
283-587
               

               
Cow position:
               
chr17:5174063-5174379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
283-587
               

               
Cow position:
               
chr17:39844737-39844421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
53, 82
               

               
Conread position:
               
283-588
               

               
Cow position:
               
chr17:11787030-11786713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 82
               

               
Conread position:
               
283-588
               

               
Cow position:
               
chr17:18563706-18564020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
53, 72
               

               
Conread position:
               
283-588
               

               
Cow position:
               
chr17:20391881-20391564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
53, 82
               

               
Conread position:
               
283-588
               

               
Cow position:
               
chr17:21211981-21212298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 82
               

               
Conread position:
               
283-588
               

               
Cow position:
               
chr17:25195799-25195482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 82
               

               
Conread position:
               
283-588
               

               
Cow position:
               
chr17:27864214-27863897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 82
               

               
Conread position:
               
283-588
               

               
Cow position:
               
chr17:30060044-30059727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 82
               

               
Conread position:
               
283-588
               

               
Cow position:
               
chr17:36412928-36413245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
284-587
               

               
Cow position:
               
chr17:43826204-43826494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
285-521
               

               
Cow position:
               
chr17:32950325-32950080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
285-552
               

               
Cow position:
               
chr17:23150737-23151018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
285-588
               

               
Cow position:
               
chr17:21312759-21313076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 154
               

               
Conread position:
               
286-558
               

               
Cow position:
               
chr17:4824538-4824268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 38
               

               
Conread position:
               
287-580
               

               
Cow position:
               
chr17:6800967-6801272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
35, 78
               

               
Conread position:
               
287-580
               

               
Cow position:
               
chr17:8213138-8212833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
48, 66
               

               
Conread position:
               
287-584
               

               
Cow position:
               
chr17:29364855-29364546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 68
               

               
Conread position:
               
287-587
               

               
Cow position:
               
chr17:13278361-13278672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 68
               

               
Conread position:
               
287-587
               

               
Cow position:
               
chr17:20226701-20226390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
287-587
               

               
Cow position:
               
chr17:24094667-24094973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
62, 50
               

               
Conread position:
               
287-588
               

               
Cow position:
               
chr17:1971257-1970943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 87
               

               
Conread position:
               
287-588
               

               
Cow position:
               
chr17:6145862-6145549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
35, 87
               

               
Conread position:
               
287-588
               

               
Cow position:
               
chr17:10025348-10025661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 78
               

               
Conread position:
               
287-588
               

               
Cow position:
               
chr17:10354010-10354323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
49, 78
               

               
Conread position:
               
287-588
               

               
Cow position:
               
chr17:12857354-12857041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
46, 78
               

               
Conread position:
               
287-588
               

               
Cow position:
               
chr17:14931839-14932149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 78
               

               
Conread position:
               
287-588
               

               
Cow position:
               
chr17:15293483-15293796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
49, 87
               

               
Conread position:
               
287-588
               

               
Cow position:
               
chr17:15910604-15910291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
287-588
               

               
Cow position:
               
chr17:16291798-16292112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 78
               

               
Conread position:
               
287-588
               

               
Cow position:
               
chr17:16504646-16504956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
287-588
               

               
Cow position:
               
chr17:17260330-17260017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
35, 157
               

               
Conread position:
               
287-588
               

               
Cow position:
               
chr17:20231679-20231992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 78
               

               
Conread position:
               
287-588
               

               
Cow position:
               
chr17:20547227-20546927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
25, 67
               

               
Conread position:
               
287-588
               

               
Cow position:
               
chr17:27985784-27986097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
287-588
               

               
Cow position:
               
chr17:31532412-31532100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
24, 67
               

               
Conread position:
               
287-588
               

               
Cow position:
               
chr17:38837616-38837308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
49, 78
               

               
Conread position:
               
287-588
               

               
Cow position:
               
chr17:43540101-43539793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
288-552
               

               
Cow position:
               
chr17:15133188-15132941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
288-555
               

               
Cow position:
               
chr17:39012770-39012490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
38, 88
               

               
Conread position:
               
288-584
               

               
Cow position:
               
chr17:33122139-33121831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
288-588
               

               
Cow position:
               
chr17:13966403-13966714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
50, 85
               

               
Conread position:
               
289-587
               

               
Cow position:
               
chr17:5895864-5896172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
22, 167
               

               
Conread position:
               
290-533
               

               
Cow position:
               
chr17:15067580-15067829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 123
               

               
Conread position:
               
295-588
               

               
Cow position:
               
chr17:27679197-27679505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 152
               

               
Conread position:
               
296-515
               

               
Cow position:
               
chr17:3442640-3442854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
31, 7
               

               
Conread position:
               
298-579
               

               
Cow position:
               
chr17:10790350-10790060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
299-577
               

               
Cow position:
               
chr17:40647033-40646751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
62, 46
               

               
Conread position:
               
299-584
               

               
Cow position:
               
chr17:22248168-22248459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
50, 38
               

               
Conread position:
               
304-554
               

               
Cow position:
               
chr17:7132423-7132682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
304-584
               

               
Cow position:
               
chr17:9897931-9897660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
304-588
               

               
Cow position:
               
chr17:21874280-21874577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
33, 7
               

               
Conread position:
               
304-588
               

               
Cow position:
               
chr17:35244592-35244876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
17, 118
               

               
Conread position:
               
305-543
               

               
Cow position:
               
chr17:20835619-20835377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
305-581
               

               
Cow position:
               
chr17:10649867-10649595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
44, 125
               

               
Conread position:
               
310-551
               

               
Cow position:
               
chr17:22781710-22781468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
39, 5
               

               
Conread position:
               
310-581
               

               
Cow position:
               
chr17:35234124-35233851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
39, 111
               

               
Conread position:
               
310-588
               

               
Cow position:
               
chr17:3156932-3156646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
310-588
               

               
Cow position:
               
chr17:5553445-5553725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 98
               

               
Conread position:
               
310-588
               

               
Cow position:
               
chr17:10271517-10271240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
23, 203
               

               
Conread position:
               
310-588
               

               
Cow position:
               
chr17:15225540-15225822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 256
               

               
Conread position:
               
311-547
               

               
Cow position:
               
chr17:36533387-36533154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
72, 33
               

               
Conread position:
               
311-554
               

               
Cow position:
               
chr17:8279689-8279935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
39, 143
               

               
Conread position:
               
311-558
               

               
Cow position:
               
chr17:2711031-2711285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
38, 5
               

               
Conread position:
               
311-580
               

               
Cow position:
               
chr17:13236703-13236980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
24, 42
               

               
Conread position:
               
311-584
               

               
Cow position:
               
chr17:32399496-32399779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
28, 198
               

               
Conread position:
               
311-585
               

               
Cow position:
               
chr17:21363426-21363150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
311-587
               

               
Cow position:
               
chr17:5809582-5809866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
311-587
               

               
Cow position:
               
chr17:19317988-19317704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr17:31517-31232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr17:3709888-3709604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
38, 5
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr17:3744238-3743953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr17:5548476-5548761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr17:5805416-5805701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
45, 40
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr17:10008540-10008825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr17:11305050-11304773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 39
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr17:11376885-11376600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr17:13998981-13999266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr17:16699408-16699687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr17:16874659-16874374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr17:17032596-17032881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr17:20987576-20987861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
38, 48
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr17:21659696-21659976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr17:21716121-21716406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr17:23879808-23880088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
38, 68
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr17:27790720-27791005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr17:34565421-34565136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
56, 40
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr17:39823119-39823404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
45, 40
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr17:42398455-42398174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
38, 59
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr17:43324194-43324479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
312-525
               

               
Cow position:
               
chr17:26515717-26515934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
312-549
               

               
Cow position:
               
chr17:25590214-25590458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
16, 124
               

               
Conread position:
               
312-554
               

               
Cow position:
               
chr17:27819325-27819075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 96
               

               
Conread position:
               
312-577
               

               
Cow position:
               
chr17:12216055-12216329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 9
               

               
Conread position:
               
312-588
               

               
Cow position:
               
chr17:4612059-4612337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
312-588
               

               
Cow position:
               
chr17:24550195-24549909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
37, 220
               

               
Conread position:
               
315-566
               

               
Cow position:
               
chr17:39595-39345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
113, 36
               

               
Conread position:
               
315-579
               

               
Cow position:
               
chr17:15985365-15985104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 124
               

               
Conread position:
               
315-581
               

               
Cow position:
               
chr17:6858372-6858646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
34, 46
               

               
Conread position:
               
315-581
               

               
Cow position:
               
chr17:41393698-41393966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
43, 143
               

               
Conread position:
               
315-588
               

               
Cow position:
               
chr17:20361881-20361602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
34, 124
               

               
Conread position:
               
315-588
               

               
Cow position:
               
chr17:35185056-35184773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
52, 41
               

               
Conread position:
               
316-553
               

               
Cow position:
               
chr17:25707974-25707729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
7, 48
               

               
Conread position:
               
316-577
               

               
Cow position:
               
chr17:1061045-1061312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 122
               

               
Conread position:
               
316-581
               

               
Cow position:
               
chr17:2516821-2517093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 102
               

               
Conread position:
               
316-581
               

               
Cow position:
               
chr17:27306172-27305909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
33, 6
               

               
Conread position:
               
316-588
               

               
Cow position:
               
chr17:6065737-6065457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 45
               

               
Conread position:
               
316-588
               

               
Cow position:
               
chr17:6263929-6263647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
23, 112
               

               
Conread position:
               
316-588
               

               
Cow position:
               
chr17:10254966-10254686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
316-588
               

               
Cow position:
               
chr17:11056357-11056640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
33, 6
               

               
Conread position:
               
316-588
               

               
Cow position:
               
chr17:13726330-13726051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
316-588
               

               
Cow position:
               
chr17:18312522-18312246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
316-588
               

               
Cow position:
               
chr17:26183237-26182961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 121
               

               
Conread position:
               
316-588
               

               
Cow position:
               
chr17:30224740-30225020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
33, 45
               

               
Conread position:
               
316-588
               

               
Cow position:
               
chr17:40368941-40368663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
33, 254
               

               
Conread position:
               
317-537
               

               
Cow position:
               
chr17:33290802-33291019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
317-588
               

               
Cow position:
               
chr17:22087684-22087405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 44
               

               
Conread position:
               
318-588
               

               
Cow position:
               
chr17:3843492-3843231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
31, 77
               

               
Conread position:
               
320-554
               

               
Cow position:
               
chr17:37414884-37415127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
320-570
               

               
Cow position:
               
chr17:37578967-37579222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
320-581
               

               
Cow position:
               
chr17:14051086-14051356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
320-588
               

               
Cow position:
               
chr17:27697692-27697953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 112
               

               
Conread position:
               
321-553
               

               
Cow position:
               
chr17:20815382-20815147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
31, 61
               

               
Conread position:
               
321-587
               

               
Cow position:
               
chr17:26085044-26084773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
28, 133
               

               
Conread position:
               
322-521
               

               
Cow position:
               
chr17:4436224-4436423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
29, 99
               

               
Conread position:
               
322-553
               

               
Cow position:
               
chr17:8214924-8214697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
183, 34
               

               
Conread position:
               
322-577
               

               
Cow position:
               
chr17:20652891-20653147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 36
               

               
Conread position:
               
322-583
               

               
Cow position:
               
chr17:19455303-19455552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
322-588
               

               
Cow position:
               
chr17:40642077-40642351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
322-588
               

               
Cow position:
               
chr17:44924178-44924436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 67
               

               
Conread position:
               
323-588
               

               
Cow position:
               
chr17:30204666-30204394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 120
               

               
Conread position:
               
324-543
               

               
Cow position:
               
chr17:33926120-33926337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 91
               

               
Conread position:
               
324-549
               

               
Cow position:
               
chr17:8861176-8861403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
26, 186
               

               
Conread position:
               
324-553
               

               
Cow position:
               
chr17:15363555-15363783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
25, 110
               

               
Conread position:
               
324-555
               

               
Cow position:
               
chr17:21017803-21017566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 78
               

               
Conread position:
               
324-578
               

               
Cow position:
               
chr17:43527975-43527730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
81, 32
               

               
Conread position:
               
324-579
               

               
Cow position:
               
chr17:10634054-10634308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
25, 117
               

               
Conread position:
               
324-588
               

               
Cow position:
               
chr17:21680771-21680507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
325-521
               

               
Cow position:
               
chr17:26881328-26881529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
325-521
               

               
Cow position:
               
chr17:35311432-35311229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
325-531
               

               
Cow position:
               
chr17:44232709-44232924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
325-543
               

               
Cow position:
               
chr17:4472812-4473019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
194, 32
               

               
Conread position:
               
325-547
               

               
Cow position:
               
chr17:5745248-5745463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
190, 31
               

               
Conread position:
               
325-554
               

               
Cow position:
               
chr17:19755895-19756130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 110
               

               
Conread position:
               
325-555
               

               
Cow position:
               
chr17:27162654-27162424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
325-563
               

               
Cow position:
               
chr17:4721497-4721251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 143
               

               
Conread position:
               
325-566
               

               
Cow position:
               
chr17:1526349-1526592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
24, 181
               

               
Conread position:
               
325-588
               

               
Cow position:
               
chr17:25740958-25740689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
24, 138
               

               
Conread position:
               
327-588
               

               
Cow position:
               
chr17:4606960-4606711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
331-575
               

               
Cow position:
               
chr17:21031782-21031540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
24, 114
               

               
Conread position:
               
331-588
               

               
Cow position:
               
chr17:27667188-27667455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
13, 111
               

               
Conread position:
               
332-543
               

               
Cow position:
               
chr17:21419435-21419216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
17, 126
               

               
Conread position:
               
332-579
               

               
Cow position:
               
chr17:5380969-5380717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
333-551
               

               
Cow position:
               
chr17:3258485-3258273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
14, 69
               

               
Conread position:
               
333-575
               

               
Cow position:
               
chr17:13409360-13409602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
16, 42
               

               
Conread position:
               
333-587
               

               
Cow position:
               
chr17:5041684-5041938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
25, 52
               

               
Conread position:
               
333-588
               

               
Cow position:
               
chr17:7040949-7041198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
16, 22
               

               
Conread position:
               
337-553
               

               
Cow position:
               
chr17:30999760-30999550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
338-548
               

               
Cow position:
               
chr17:31263305-31263523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
338-588
               

               
Cow position:
               
chr17:14244167-14243909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
338-588
               

               
Cow position:
               
chr17:22226263-22226520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 36
               

               
Conread position:
               
338-588
               

               
Cow position:
               
chr17:28023844-28024102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
341-540
               

               
Cow position:
               
chr17:35371835-35372029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
11, 90
               

               
Conread position:
               
343-526
               

               
Cow position:
               
chr17:21412257-21412446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
7, 100
               

               
Conread position:
               
348-553
               

               
Cow position:
               
chr17:3578216-3578019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
171, 35
               

               
Conread position:
               
352-585
               

               
Cow position:
               
chr17:3095799-3095567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
163, 27
               

               
Conread position:
               
355-584
               

               
Cow position:
               
chr17:6082505-6082286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 74
               

               
Conread position:
               
358-588
               

               
Cow position:
               
chr17:8832133-8832364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
361-574
               

               
Cow position:
               
chr17:16869312-16869524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
43, 73
               

               
Conread position:
               
361-587
               

               
Cow position:
               
chr17:34628511-34628745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
8, 93
               

               
Conread position:
               
361-588
               

               
Cow position:
               
chr17:2152158-2151930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 85
               

               
Conread position:
               
363-553
               

               
Cow position:
               
chr17:37773573-37773758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
161, 63
               

               
Conread position:
               
363-554
               

               
Cow position:
               
chr17:7559706-7559898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
141, 16
               

               
Conread position:
               
364-539
               

               
Cow position:
               
chr17:21710467-21710293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
65, 46
               

               
Conread position:
               
364-543
               

               
Cow position:
               
chr17:3182623-3182800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
64, 69
               

               
Conread position:
               
364-543
               

               
Cow position:
               
chr17:29040504-29040682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
364-547
               

               
Cow position:
               
chr17:38116375-38116192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
150, 27
               

               
Conread position:
               
364-551
               

               
Cow position:
               
chr17:1358839-1359021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
154, 62
               

               
Conread position:
               
364-565
               

               
Cow position:
               
chr17:26627677-26627881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
364-581
               

               
Cow position:
               
chr17:23337055-23337268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
151, 41
               

               
Conread position:
               
364-581
               

               
Cow position:
               
chr17:25168280-25168059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
39, 153
               

               
Conread position:
               
364-588
               

               
Cow position:
               
chr17:3498702-3498925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
40, 64
               

               
Conread position:
               
364-588
               

               
Cow position:
               
chr17:16117461-16117689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 215
               

               
Conread position:
               
365-547
               

               
Cow position:
               
chr17:23680945-23680764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 66
               

               
Conread position:
               
365-547
               

               
Cow position:
               
chr17:27979131-27978951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
63, 30
               

               
Conread position:
               
365-554
               

               
Cow position:
               
chr17:25078042-25078220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 63
               

               
Conread position:
               
365-572
               

               
Cow position:
               
chr17:24877103-24876893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
365-588
               

               
Cow position:
               
chr17:15329294-15329068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 137
               

               
Conread position:
               
365-588
               

               
Cow position:
               
chr17:25755748-25755523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
113, 106
               

               
Conread position:
               
366-554
               

               
Cow position:
               
chr17:16307338-16307152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
17, 74
               

               
Conread position:
               
366-555
               

               
Cow position:
               
chr17:36533616-36533433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
153, 78
               

               
Conread position:
               
366-588
               

               
Cow position:
               
chr17:1482312-1482091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 45
               

               
Conread position:
               
366-588
               

               
Cow position:
               
chr17:18494556-18494774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 63
               

               
Conread position:
               
370-588
               

               
Cow position:
               
chr17:29074377-29074602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
371-588
               

               
Cow position:
               
chr17:21039233-21039017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
144, 124
               

               
Conread position:
               
372-584
               

               
Cow position:
               
chr17:14901885-14901668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
373-587
               

               
Cow position:
               
chr17:6072536-6072318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
373-588
               

               
Cow position:
               
chr17:16854101-16854320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
373-588
               

               
Cow position:
               
chr17:29277184-29276971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
146, 75
               

               
Conread position:
               
373-588
               

               
Cow position:
               
chr17:43008675-43008457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
376-588
               

               
Cow position:
               
chr17:17982826-17983034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 59
               

               
Conread position:
               
376-588
               

               
Cow position:
               
chr17:19266454-19266667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 51
               

               
Conread position:
               
379-580
               

               
Cow position:
               
chr17:9817940-9818143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
140, 192
               

               
Conread position:
               
381-552
               

               
Cow position:
               
chr17:20337735-20337570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
383-541
               

               
Cow position:
               
chr17:1328025-1328184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
383-579
               

               
Cow position:
               
chr17:1464106-1463907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 120
               

               
Conread position:
               
383-581
               

               
Cow position:
               
chr17:11471851-11471650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
383-588
               

               
Cow position:
               
chr17:15854736-15854529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
20, 26
               

               
Conread position:
               
383-588
               

               
Cow position:
               
chr17:26771414-26771615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
20, 70
               

               
Conread position:
               
383-588
               

               
Cow position:
               
chr17:29951489-29951282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
383-588
               

               
Cow position:
               
chr17:34390617-34390822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
384-548
               

               
Cow position:
               
chr17:12759694-12759861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
19, 49
               

               
Conread position:
               
384-552
               

               
Cow position:
               
chr17:24128912-24128745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
67, 72
               

               
Conread position:
               
384-555
               

               
Cow position:
               
chr17:15354924-15354758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 63
               

               
Conread position:
               
384-561
               

               
Cow position:
               
chr17:2177942-2177763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 52
               

               
Conread position:
               
384-581
               

               
Cow position:
               
chr17:17179971-17179786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
20, 45
               

               
Conread position:
               
384-587
               

               
Cow position:
               
chr17:20269543-20269352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
44, 50
               

               
Conread position:
               
384-588
               

               
Cow position:
               
chr17:5695006-5695203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
135, 13
               

               
Conread position:
               
384-588
               

               
Cow position:
               
chr17:20908455-20908660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
19, 142
               

               
Conread position:
               
385-584
               

               
Cow position:
               
chr17:8644980-8644780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
43, 49
               

               
Conread position:
               
385-588
               

               
Cow position:
               
chr17:5330520-5330314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
385-588
               

               
Cow position:
               
chr17:24786330-24786124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
386-588
               

               
Cow position:
               
chr17:25844685-25844478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 51
               

               
Conread position:
               
388-493
               

               
Cow position:
               
chr17:29812218-29812115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
388-577
               

               
Cow position:
               
chr17:1026217-1026029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
127, 31
               

               
Conread position:
               
388-577
               

               
Cow position:
               
chr17:41995734-41995542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
390-539
               

               
Cow position:
               
chr17:3371388-3371238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
390-576
               

               
Cow position:
               
chr17:13124796-13124983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
38, 44
               

               
Conread position:
               
390-587
               

               
Cow position:
               
chr17:40406243-40406047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
125, 177
               

               
Conread position:
               
394-588
               

               
Cow position:
               
chr17:43725577-43725773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
396-554
               

               
Cow position:
               
chr17:7423512-7423668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 38
               

               
Conread position:
               
396-588
               

               
Cow position:
               
chr17:20696166-20695973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
397-588
               

               
Cow position:
               
chr17:20874246-20874061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
397-588
               

               
Cow position:
               
chr17:31427719-31427527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
122, 25
               

               
Conread position:
               
400-588
               

               
Cow position:
               
chr17:11386438-11386255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
401-547
               

               
Cow position:
               
chr17:18884419-18884567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
401-578
               

               
Cow position:
               
chr17:11374767-11374940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
401-584
               

               
Cow position:
               
chr17:16895373-16895551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
118, 27
               

               
Conread position:
               
401-587
               

               
Cow position:
               
chr17:5747869-5748060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
401-587
               

               
Cow position:
               
chr17:35388089-35388274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
76, 47
               

               
Conread position:
               
401-588
               

               
Cow position:
               
chr17:3153844-3154030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
114, 166
               

               
Conread position:
               
401-588
               

               
Cow position:
               
chr17:12054643-12054459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
118, 45
               

               
Conread position:
               
401-588
               

               
Cow position:
               
chr17:15893829-15893643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
118, 109
               

               
Conread position:
               
401-588
               

               
Cow position:
               
chr17:21926632-21926449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
401-588
               

               
Cow position:
               
chr17:22081976-22082153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
155, 30
               

               
Conread position:
               
401-588
               

               
Cow position:
               
chr17:23723813-23723617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
401-588
               

               
Cow position:
               
chr17:31122670-31122859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
401-588
               

               
Cow position:
               
chr17:42026464-42026275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
401-588
               

               
Cow position:
               
chr17:43992461-43992274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
118, 22
               

               
Conread position:
               
402-573
               

               
Cow position:
               
chr17:4836540-4836368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
402-577
               

               
Cow position:
               
chr17:2258206-2258029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-579
               

               
Cow position:
               
chr17:26532792-26532616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
117, 93
               

               
Conread position:
               
402-580
               

               
Cow position:
               
chr17:10250093-10249906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
402-580
               

               
Cow position:
               
chr17:18776868-18777043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
117, 23
               

               
Conread position:
               
402-581
               

               
Cow position:
               
chr17:24025999-24026188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 128
               

               
Conread position:
               
402-581
               

               
Cow position:
               
chr17:36504105-36504281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
402-587
               

               
Cow position:
               
chr17:76788-76975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:148884-148696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:399637-399825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:3196660-3196847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:4152296-4152484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:4752812-4752627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
26, 32
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:6123761-6123573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:7396314-7396504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:7585397-7585209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
117, 170
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:7821109-7821294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 78
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:9662775-9662963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:12657716-12657903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
117, 42
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:13425512-13425335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:13871477-13871289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:14008409-14008216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
97, 29
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:14239508-14239696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:15040478-15040666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:15319269-15319081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 24
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:15439767-15439579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:17129073-17128886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 32
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:17494268-17494080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:18337756-18337944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:18410598-18410786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:19377173-19377361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:22211781-22211593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:24503776-24503588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:24983427-24983607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:25946877-25947065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:26823022-26822834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
37, 43
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:30753123-30753311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
77, 69
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:30815949-30816138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:31986223-31986411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:37527770-37527958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr17:42843979-42843791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
403-554
               

               
Cow position:
               
chr17:15376244-15376096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
116, 25
               

               
Conread position:
               
403-581
               

               
Cow position:
               
chr17:34017043-34017222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
116, 160
               

               
Conread position:
               
403-588
               

               
Cow position:
               
chr17:3387204-3387036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
116, 36
               

               
Conread position:
               
403-588
               

               
Cow position:
               
chr17:10511964-10512150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
116, 83
               

               
Conread position:
               
403-588
               

               
Cow position:
               
chr17:22057251-22057434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
117, 45
               

               
Conread position:
               
403-588
               

               
Cow position:
               
chr17:23517246-23517428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
404-578
               

               
Cow position:
               
chr17:33370289-33370462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
111, 40
               

               
Conread position:
               
404-588
               

               
Cow position:
               
chr17:4085628-4085443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
29, 57
               

               
Conread position:
               
405-551
               

               
Cow position:
               
chr17:10770000-10769858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
405-566
               

               
Cow position:
               
chr17:17267005-17267171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
405-588
               

               
Cow position:
               
chr17:6180929-6180745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
114, 125
               

               
Conread position:
               
405-588
               

               
Cow position:
               
chr17:14021499-14021680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
70, 76
               

               
Conread position:
               
405-588
               

               
Cow position:
               
chr17:28155384-28155569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
405-588
               

               
Cow position:
               
chr17:33058634-33058819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 23
               

               
Conread position:
               
406-584
               

               
Cow position:
               
chr17:9950883-9950702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
408-584
               

               
Cow position:
               
chr17:9660358-9660534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
111, 36
               

               
Conread position:
               
409-565
               

               
Cow position:
               
chr17:18266990-18266822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
410-579
               

               
Cow position:
               
chr17:144258-144425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
144, 38
               

               
Conread position:
               
411-580
               

               
Cow position:
               
chr17:24979027-24978856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
412-543
               

               
Cow position:
               
chr17:15155271-15155404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
412-580
               

               
Cow position:
               
chr17:5053391-5053212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
16, 56
               

               
Conread position:
               
412-588
               

               
Cow position:
               
chr17:16463198-16463375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
107, 76
               

               
Conread position:
               
413-588
               

               
Cow position:
               
chr17:11912788-11912961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
416-588
               

               
Cow position:
               
chr17:22135408-22135238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
94, 150
               

               
Conread position:
               
417-588
               

               
Cow position:
               
chr17:32133433-32133264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
419-588
               

               
Cow position:
               
chr17:25344029-25344201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
420-584
               

               
Cow position:
               
chr17:20858131-20858297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
421-581
               

               
Cow position:
               
chr17:9175776-9175937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
98, 12
               

               
Conread position:
               
422-573
               

               
Cow position:
               
chr17:18070684-18070531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
427-581
               

               
Cow position:
               
chr17:4155506-4155352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 6
               

               
Conread position:
               
431-586
               

               
Cow position:
               
chr17:26162654-26162816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
43, 39
               

               
Conread position:
               
432-543
               

               
Cow position:
               
chr17:4685467-4685350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
432-546
               

               
Cow position:
               
chr17:32977078-32977193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
432-549
               

               
Cow position:
               
chr17:24294063-24293946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
87, 44
               

               
Conread position:
               
432-549
               

               
Cow position:
               
chr17:43284272-43284157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
432-574
               

               
Cow position:
               
chr17:2248231-2248087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
432-579
               

               
Cow position:
               
chr17:17266451-17266599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
432-580
               

               
Cow position:
               
chr17:15352975-15352821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
432-581
               

               
Cow position:
               
chr17:24754531-24754683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
432-584
               

               
Cow position:
               
chr17:6956587-6956433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 139
               

               
Conread position:
               
432-588
               

               
Cow position:
               
chr17:185094-184936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
432-588
               

               
Cow position:
               
chr17:4634719-4634877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
432-588
               

               
Cow position:
               
chr17:5637944-5638102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
432-588
               

               
Cow position:
               
chr17:15118764-15118606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
432-588
               

               
Cow position:
               
chr17:21771501-21771343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
432-588
               

               
Cow position:
               
chr17:21806905-21807063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
69, 138
               

               
Conread position:
               
432-588
               

               
Cow position:
               
chr17:22790993-22790837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
88, 74
               

               
Conread position:
               
432-588
               

               
Cow position:
               
chr17:26828798-26828956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
432-588
               

               
Cow position:
               
chr17:27580561-27580411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
20, 75
               

               
Conread position:
               
432-588
               

               
Cow position:
               
chr17:31077277-31077120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
433-588
               

               
Cow position:
               
chr17:7129065-7128912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
439-588
               

               
Cow position:
               
chr17:40802700-40802551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
440-579
               

               
Cow position:
               
chr17:16398908-16399049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
440-584
               

               
Cow position:
               
chr17:9567898-9568044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
440-588
               

               
Cow position:
               
chr17:1710282-1710133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
440-588
               

               
Cow position:
               
chr17:5740452-5740305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 127
               

               
Conread position:
               
440-588
               

               
Cow position:
               
chr17:13457929-13458079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
440-588
               

               
Cow position:
               
chr17:34191043-34191193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
440-588
               

               
Cow position:
               
chr17:40701560-40701410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
441-588
               

               
Cow position:
               
chr17:37161304-37161154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
441-588
               

               
Cow position:
               
chr17:42560004-42559855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
6, 41
               

               
Conread position:
               
442-581
               

               
Cow position:
               
chr17:2520171-2520312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
442-583
               

               
Cow position:
               
chr17:6996168-6996023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
442-588
               

               
Cow position:
               
chr17:2275162-2275013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
442-588
               

               
Cow position:
               
chr17:2729910-2730059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
443-588
               

               
Cow position:
               
chr17:6997974-6997829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
448-563
               

               
Cow position:
               
chr17:15299989-15300106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
448-588
               

               
Cow position:
               
chr17:9748651-9748509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
449-588
               

               
Cow position:
               
chr17:19484569-19484710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
450-588
               

               
Cow position:
               
chr17:2270647-2270507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
451-581
               

               
Cow position:
               
chr17:30728148-30728019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
453-581
               

               
Cow position:
               
chr17:38829959-38829830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
66, 119
               
Show alignments to all cow chromosomes.