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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8025J04.5
        

               
Conread position:
               
63-265
               

               
Cow position:
               
chr25:18934399-18934608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
67-573
               

               
Cow position:
               
chr25:20076711-20076204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
22, 31
               

               
Conread position:
               
68-481
               

               
Cow position:
               
chr25:12755258-12755686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 13
               

               
Conread position:
               
68-551
               

               
Cow position:
               
chr25:8511878-8512358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
68-558
               

               
Cow position:
               
chr25:12260651-12261168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
31, 22
               

               
Conread position:
               
69-488
               

               
Cow position:
               
chr25:7750679-7750248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 66
               

               
Conread position:
               
72-580
               

               
Cow position:
               
chr25:30319222-30319745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 24
               

               
Conread position:
               
72-588
               

               
Cow position:
               
chr25:10407185-10407722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 24
               

               
Conread position:
               
73-553
               

               
Cow position:
               
chr25:8226334-8225836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
21, 78
               

               
Conread position:
               
74-413
               

               
Cow position:
               
chr25:12509795-12510140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
55, 60
               

               
Conread position:
               
74-492
               

               
Cow position:
               
chr25:22179133-22178715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 38
               

               
Conread position:
               
75-587
               

               
Cow position:
               
chr25:26655116-26654604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 29
               

               
Conread position:
               
76-581
               

               
Cow position:
               
chr25:3993004-3992493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 186
               

               
Conread position:
               
76-583
               

               
Cow position:
               
chr25:6463800-6464328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 184
               

               
Conread position:
               
76-584
               

               
Cow position:
               
chr25:1838468-1837943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 377
               

               
Conread position:
               
76-588
               

               
Cow position:
               
chr25:6469982-6470520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 377
               

               
Conread position:
               
77-584
               

               
Cow position:
               
chr25:33959021-33959560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
30, 443
               

               
Conread position:
               
78-587
               

               
Cow position:
               
chr25:13325788-13325299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
55, 20
               

               
Conread position:
               
78-588
               

               
Cow position:
               
chr25:26087737-26087211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 19
               

               
Conread position:
               
79-588
               

               
Cow position:
               
chr25:11957026-11956523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 250
               

               
Conread position:
               
80-304
               

               
Cow position:
               
chr25:20203127-20202901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
80-459
               

               
Cow position:
               
chr25:11316126-11315733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
18, 57
               

               
Conread position:
               
80-523
               

               
Cow position:
               
chr25:13380374-13380855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
81-333
               

               
Cow position:
               
chr25:13826651-13826396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 235
               

               
Conread position:
               
81-553
               

               
Cow position:
               
chr25:20785367-20785850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 54
               

               
Conread position:
               
81-566
               

               
Cow position:
               
chr25:20349097-20348576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
19, 394
               

               
Conread position:
               
81-581
               

               
Cow position:
               
chr25:24573279-24572775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
81-588
               

               
Cow position:
               
chr25:22315420-22314897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 16
               

               
Conread position:
               
82-316
               

               
Cow position:
               
chr25:36873116-36873357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 113
               

               
Conread position:
               
82-413
               

               
Cow position:
               
chr25:11051740-11051397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
81, 51
               

               
Conread position:
               
82-426
               

               
Cow position:
               
chr25:12609562-12609201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
27, 183
               

               
Conread position:
               
82-584
               

               
Cow position:
               
chr25:18294094-18294614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 22
               

               
Conread position:
               
82-588
               

               
Cow position:
               
chr25:20069933-20069420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
83-330
               

               
Cow position:
               
chr25:28597387-28597650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
83-332
               

               
Cow position:
               
chr25:35109062-35109309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
52, 33
               

               
Conread position:
               
83-431
               

               
Cow position:
               
chr25:21668463-21668096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
84-536
               

               
Cow position:
               
chr25:24669234-24669682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 131
               

               
Conread position:
               
84-554
               

               
Cow position:
               
chr25:22203477-22203960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
26, 130
               

               
Conread position:
               
84-555
               

               
Cow position:
               
chr25:33457939-33457435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
126, 11
               

               
Conread position:
               
85-543
               

               
Cow position:
               
chr25:38958158-38957719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
125, 19
               

               
Conread position:
               
85-581
               

               
Cow position:
               
chr25:12098054-12097546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 117
               

               
Conread position:
               
86-584
               

               
Cow position:
               
chr25:8120996-8120477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 110
               

               
Conread position:
               
88-503
               

               
Cow position:
               
chr25:26089616-26090029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 24
               

               
Conread position:
               
88-521
               

               
Cow position:
               
chr25:23324160-23324599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
27, 123
               

               
Conread position:
               
88-543
               

               
Cow position:
               
chr25:12778349-12778793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 46
               

               
Conread position:
               
90-493
               

               
Cow position:
               
chr25:40904617-40905036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
45, 387
               

               
Conread position:
               
91-446
               

               
Cow position:
               
chr25:30462112-30462463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
70, 78
               

               
Conread position:
               
91-463
               

               
Cow position:
               
chr25:20523029-20523411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
111, 43
               

               
Conread position:
               
91-553
               

               
Cow position:
               
chr25:14833458-14833920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
24, 102
               

               
Conread position:
               
91-566
               

               
Cow position:
               
chr25:5834033-5834535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
91-587
               

               
Cow position:
               
chr25:16921584-16922095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 299
               

               
Conread position:
               
91-588
               

               
Cow position:
               
chr25:15273874-15273386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
91-588
               

               
Cow position:
               
chr25:21191686-21191186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 65
               

               
Conread position:
               
91-588
               

               
Cow position:
               
chr25:27869023-27868506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
20, 46
               

               
Conread position:
               
91-588
               

               
Cow position:
               
chr25:35348115-35347598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 179
               

               
Conread position:
               
92-454
               

               
Cow position:
               
chr25:26136610-26136996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
92-504
               

               
Cow position:
               
chr25:12899973-12899537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
94-353
               

               
Cow position:
               
chr25:1840528-1840254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
95-446
               

               
Cow position:
               
chr25:41150758-41151124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
14, 223
               

               
Conread position:
               
96-563
               

               
Cow position:
               
chr25:38850282-38850769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
97-328
               

               
Cow position:
               
chr25:18288567-18288805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
38, 179
               

               
Conread position:
               
97-584
               

               
Cow position:
               
chr25:11585732-11585211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 302
               

               
Conread position:
               
97-588
               

               
Cow position:
               
chr25:26524166-26523675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
12, 197
               

               
Conread position:
               
98-305
               

               
Cow position:
               
chr25:36872853-36873069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
98-509
               

               
Cow position:
               
chr25:7008122-7007693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 300
               

               
Conread position:
               
98-522
               

               
Cow position:
               
chr25:19478892-19478451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 283
               

               
Conread position:
               
98-546
               

               
Cow position:
               
chr25:33550713-33550244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 314
               

               
Conread position:
               
98-554
               

               
Cow position:
               
chr25:26701222-26700770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 83
               

               
Conread position:
               
98-581
               

               
Cow position:
               
chr25:33663704-33664193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
11, 95
               

               
Conread position:
               
98-584
               

               
Cow position:
               
chr25:18720925-18721408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 87
               

               
Conread position:
               
98-588
               

               
Cow position:
               
chr25:30852967-30852470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 248
               

               
Conread position:
               
99-417
               

               
Cow position:
               
chr25:4245866-4245555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
36, 91
               

               
Conread position:
               
99-479
               

               
Cow position:
               
chr25:32453231-32453591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
99-492
               

               
Cow position:
               
chr25:13272770-13272363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 290
               

               
Conread position:
               
99-587
               

               
Cow position:
               
chr25:7217018-7216525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 82
               

               
Conread position:
               
100-331
               

               
Cow position:
               
chr25:22348257-22348502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
100-407
               

               
Cow position:
               
chr25:9843382-9843052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
9, 33
               

               
Conread position:
               
100-445
               

               
Cow position:
               
chr25:26679428-26679065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
100-447
               

               
Cow position:
               
chr25:21893535-21893173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
10, 92
               

               
Conread position:
               
100-580
               

               
Cow position:
               
chr25:10643116-10643604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 84
               

               
Conread position:
               
100-588
               

               
Cow position:
               
chr25:21245393-21245910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 380
               

               
Conread position:
               
101-583
               

               
Cow position:
               
chr25:23053762-23053257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 274
               

               
Conread position:
               
101-588
               

               
Cow position:
               
chr25:14791953-14791452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 160
               

               
Conread position:
               
101-588
               

               
Cow position:
               
chr25:30278998-30279512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
101-588
               

               
Cow position:
               
chr25:36746249-36746750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 134
               

               
Conread position:
               
102-329
               

               
Cow position:
               
chr25:18810530-18810307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
7, 96
               

               
Conread position:
               
103-417
               

               
Cow position:
               
chr25:22756809-22756474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
103-490
               

               
Cow position:
               
chr25:17704936-17704545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
32, 82
               

               
Conread position:
               
103-579
               

               
Cow position:
               
chr25:4521643-4522112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 159
               

               
Conread position:
               
103-581
               

               
Cow position:
               
chr25:17975201-17975664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 67
               

               
Conread position:
               
103-588
               

               
Cow position:
               
chr25:7641258-7641757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 75
               

               
Conread position:
               
104-479
               

               
Cow position:
               
chr25:14720928-14720559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
31, 116
               

               
Conread position:
               
104-538
               

               
Cow position:
               
chr25:38135949-38135493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
30, 127
               

               
Conread position:
               
104-544
               

               
Cow position:
               
chr25:19130050-19129593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 365
               

               
Conread position:
               
104-553
               

               
Cow position:
               
chr25:9989906-9990358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 231
               

               
Conread position:
               
104-582
               

               
Cow position:
               
chr25:21192744-21193241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 94
               

               
Conread position:
               
104-588
               

               
Cow position:
               
chr25:11436628-11437106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 65
               

               
Conread position:
               
105-417
               

               
Cow position:
               
chr25:6928321-6928643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 77
               

               
Conread position:
               
105-581
               

               
Cow position:
               
chr25:17658807-17658318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 286
               

               
Conread position:
               
106-588
               

               
Cow position:
               
chr25:6682856-6683365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 340
               

               
Conread position:
               
107-522
               

               
Cow position:
               
chr25:26338658-26338209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
109-547
               

               
Cow position:
               
chr25:40321104-40321555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
112-588
               

               
Cow position:
               
chr25:23828942-23829418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 193
               

               
Conread position:
               
113-448
               

               
Cow position:
               
chr25:36835245-36835590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 256
               

               
Conread position:
               
114-327
               

               
Cow position:
               
chr25:22298818-22298602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
114-329
               

               
Cow position:
               
chr25:11432766-11432982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
21, 67
               

               
Conread position:
               
114-332
               

               
Cow position:
               
chr25:26306017-26306245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
21, 174
               

               
Conread position:
               
114-441
               

               
Cow position:
               
chr25:7380652-7380999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
53, 221
               

               
Conread position:
               
114-537
               

               
Cow position:
               
chr25:10156739-10156338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
211, 75
               

               
Conread position:
               
114-542
               

               
Cow position:
               
chr25:5846619-5847064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 287
               

               
Conread position:
               
114-557
               

               
Cow position:
               
chr25:14513292-14512843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
114-581
               

               
Cow position:
               
chr25:10504149-10504633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
21, 178
               

               
Conread position:
               
114-582
               

               
Cow position:
               
chr25:16318964-16319424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 46
               

               
Conread position:
               
115-417
               

               
Cow position:
               
chr25:19363875-19364193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
23, 19
               

               
Conread position:
               
115-526
               

               
Cow position:
               
chr25:22369571-22369151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 181
               

               
Conread position:
               
115-558
               

               
Cow position:
               
chr25:36082052-36081601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 54
               

               
Conread position:
               
115-566
               

               
Cow position:
               
chr25:20023209-20023681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 54
               

               
Conread position:
               
115-588
               

               
Cow position:
               
chr25:20402524-20403023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
115-588
               

               
Cow position:
               
chr25:20461301-20460827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 190
               

               
Conread position:
               
116-543
               

               
Cow position:
               
chr25:19679536-19679083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 76
               

               
Conread position:
               
117-384
               

               
Cow position:
               
chr25:36872546-36872264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
117-462
               

               
Cow position:
               
chr25:23244821-23245185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
18, 334
               

               
Conread position:
               
118-338
               

               
Cow position:
               
chr25:13223080-13222854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
118-584
               

               
Cow position:
               
chr25:11661648-11662115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
119-469
               

               
Cow position:
               
chr25:17190573-17190927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
119-502
               

               
Cow position:
               
chr25:2624975-2624588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 145
               

               
Conread position:
               
120-329
               

               
Cow position:
               
chr25:9107353-9107560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
91, 14
               

               
Conread position:
               
120-587
               

               
Cow position:
               
chr25:37637481-37637957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
15, 215
               

               
Conread position:
               
124-587
               

               
Cow position:
               
chr25:16065056-16064596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 8
               

               
Conread position:
               
132-580
               

               
Cow position:
               
chr25:36762269-36761810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 14
               

               
Conread position:
               
134-526
               

               
Cow position:
               
chr25:41132201-41132597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
85, 57
               

               
Conread position:
               
134-588
               

               
Cow position:
               
chr25:788422-787968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
62, 143
               

               
Conread position:
               
138-584
               

               
Cow position:
               
chr25:15715033-15714581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 218
               

               
Conread position:
               
139-588
               

               
Cow position:
               
chr25:16867405-16866928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 252
               

               
Conread position:
               
140-460
               

               
Cow position:
               
chr25:32277454-32277778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
140-554
               

               
Cow position:
               
chr25:6238284-6237853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
23, 202
               

               
Conread position:
               
142-542
               

               
Cow position:
               
chr25:7581276-7581685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 41
               

               
Conread position:
               
147-535
               

               
Cow position:
               
chr25:18988532-18988126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
161-498
               

               
Cow position:
               
chr25:35826146-35826488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 207
               

               
Conread position:
               
161-501
               

               
Cow position:
               
chr25:12319218-12319553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 87
               

               
Conread position:
               
161-513
               

               
Cow position:
               
chr25:34170081-34169727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 99
               

               
Conread position:
               
161-541
               

               
Cow position:
               
chr25:15254213-15254588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 161
               

               
Conread position:
               
161-555
               

               
Cow position:
               
chr25:22296900-22297288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
152, 9
               

               
Conread position:
               
161-588
               

               
Cow position:
               
chr25:22531416-22530983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 120
               

               
Conread position:
               
163-552
               

               
Cow position:
               
chr25:28187812-28188216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 282
               

               
Conread position:
               
165-533
               

               
Cow position:
               
chr25:12293614-12294000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
165-580
               

               
Cow position:
               
chr25:6473956-6474396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
39, 259
               

               
Conread position:
               
166-554
               

               
Cow position:
               
chr25:14196991-14196585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
43, 282
               

               
Conread position:
               
167-554
               

               
Cow position:
               
chr25:23917969-23917572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
43, 22
               

               
Conread position:
               
169-584
               

               
Cow position:
               
chr25:4547595-4548015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 28
               

               
Conread position:
               
171-588
               

               
Cow position:
               
chr25:13569051-13569471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 69
               

               
Conread position:
               
174-547
               

               
Cow position:
               
chr25:12116877-12117249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
45, 191
               

               
Conread position:
               
184-581
               

               
Cow position:
               
chr25:4681338-4680942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 36
               

               
Conread position:
               
185-583
               

               
Cow position:
               
chr25:18448921-18448542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
35, 136
               

               
Conread position:
               
187-478
               

               
Cow position:
               
chr25:17342567-17342257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 266
               

               
Conread position:
               
194-588
               

               
Cow position:
               
chr25:20624834-20625233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
13, 47
               

               
Conread position:
               
201-421
               

               
Cow position:
               
chr25:24052055-24051824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
130, 12
               

               
Conread position:
               
204-581
               

               
Cow position:
               
chr25:32191749-32191372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 54
               

               
Conread position:
               
215-414
               

               
Cow position:
               
chr25:7449880-7449676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 105
               

               
Conread position:
               
216-554
               

               
Cow position:
               
chr25:21267070-21266736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
13, 105
               

               
Conread position:
               
219-542
               

               
Cow position:
               
chr25:10949508-10949810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
154, 16
               

               
Conread position:
               
219-575
               

               
Cow position:
               
chr25:9847861-9847493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
91, 136
               

               
Conread position:
               
219-580
               

               
Cow position:
               
chr25:19924599-19924227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
10, 147
               

               
Conread position:
               
219-581
               

               
Cow position:
               
chr25:17598420-17598791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
219-581
               

               
Cow position:
               
chr25:41097112-41097490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
58, 161
               

               
Conread position:
               
219-587
               

               
Cow position:
               
chr25:27531198-27531571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
55, 217
               

               
Conread position:
               
219-588
               

               
Cow position:
               
chr25:3145917-3145542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 281
               

               
Conread position:
               
219-588
               

               
Cow position:
               
chr25:36555078-36554701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 137
               

               
Conread position:
               
220-521
               

               
Cow position:
               
chr25:15377398-15377098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
97, 37
               

               
Conread position:
               
220-583
               

               
Cow position:
               
chr25:41107826-41107459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 45
               

               
Conread position:
               
221-502
               

               
Cow position:
               
chr25:29826481-29826195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 70
               

               
Conread position:
               
221-537
               

               
Cow position:
               
chr25:14467023-14467335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
128, 14
               

               
Conread position:
               
221-547
               

               
Cow position:
               
chr25:11131655-11131322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 28
               

               
Conread position:
               
221-578
               

               
Cow position:
               
chr25:6227106-6226747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 90
               

               
Conread position:
               
221-579
               

               
Cow position:
               
chr25:21208899-21209241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 23
               

               
Conread position:
               
221-581
               

               
Cow position:
               
chr25:21894814-21895184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
221-587
               

               
Cow position:
               
chr25:8576765-8576388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
82, 137
               

               
Conread position:
               
221-588
               

               
Cow position:
               
chr25:11829852-11830200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 59
               

               
Conread position:
               
221-588
               

               
Cow position:
               
chr25:12817436-12817069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 40
               

               
Conread position:
               
221-588
               

               
Cow position:
               
chr25:25051307-25051688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 82
               

               
Conread position:
               
224-587
               

               
Cow position:
               
chr25:26238930-26238566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 115
               

               
Conread position:
               
225-469
               

               
Cow position:
               
chr25:18905952-18905698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
225-521
               

               
Cow position:
               
chr25:61717-61422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
124, 95
               

               
Conread position:
               
225-533
               

               
Cow position:
               
chr25:20019936-20020236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
93, 28
               

               
Conread position:
               
225-538
               

               
Cow position:
               
chr25:38425428-38425106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
89, 178
               

               
Conread position:
               
225-547
               

               
Cow position:
               
chr25:37594473-37594151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
99, 157
               

               
Conread position:
               
225-553
               

               
Cow position:
               
chr25:35612246-35612570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
82, 141
               

               
Conread position:
               
225-577
               

               
Cow position:
               
chr25:21024137-21024509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 269
               

               
Conread position:
               
225-584
               

               
Cow position:
               
chr25:27821480-27821110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
38, 94
               

               
Conread position:
               
225-588
               

               
Cow position:
               
chr25:18564553-18564191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
113, 38
               

               
Conread position:
               
226-492
               

               
Cow position:
               
chr25:16714203-16714480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 77
               

               
Conread position:
               
226-587
               

               
Cow position:
               
chr25:33256419-33256071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
93, 57
               

               
Conread position:
               
227-547
               

               
Cow position:
               
chr25:36036714-36037043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 217
               

               
Conread position:
               
227-587
               

               
Cow position:
               
chr25:5756749-5756388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
107, 26
               

               
Conread position:
               
228-497
               

               
Cow position:
               
chr25:20133250-20133527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 227
               

               
Conread position:
               
228-551
               

               
Cow position:
               
chr25:6885907-6886244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
93, 255
               

               
Conread position:
               
228-554
               

               
Cow position:
               
chr25:17566651-17566314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
93, 222
               

               
Conread position:
               
228-578
               

               
Cow position:
               
chr25:14118155-14117815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
98, 12
               

               
Conread position:
               
228-579
               

               
Cow position:
               
chr25:34012688-34013049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
101, 72
               

               
Conread position:
               
228-580
               

               
Cow position:
               
chr25:379914-380277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
94, 137
               

               
Conread position:
               
228-588
               

               
Cow position:
               
chr25:12208559-12208187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
94, 137
               

               
Conread position:
               
228-588
               

               
Cow position:
               
chr25:23406774-23407148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
49, 91
               

               
Conread position:
               
228-588
               

               
Cow position:
               
chr25:25753932-25754299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 208
               

               
Conread position:
               
228-588
               

               
Cow position:
               
chr25:36391889-36392268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
49, 122
               

               
Conread position:
               
228-588
               

               
Cow position:
               
chr25:36765244-36765599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 40
               

               
Conread position:
               
229-471
               

               
Cow position:
               
chr25:37562761-37562522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
118, 85
               

               
Conread position:
               
229-588
               

               
Cow position:
               
chr25:21951193-21950822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
51, 212
               

               
Conread position:
               
232-538
               

               
Cow position:
               
chr25:2194991-2194693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
166, 40
               

               
Conread position:
               
232-543
               

               
Cow position:
               
chr25:13099418-13099739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
90, 6
               

               
Conread position:
               
232-551
               

               
Cow position:
               
chr25:18013463-18013133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
92, 118
               

               
Conread position:
               
232-580
               

               
Cow position:
               
chr25:13955320-13955680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
90, 133
               

               
Conread position:
               
232-581
               

               
Cow position:
               
chr25:5539482-5539125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
92, 123
               

               
Conread position:
               
232-588
               

               
Cow position:
               
chr25:8230822-8231186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
97, 235
               

               
Conread position:
               
232-588
               

               
Cow position:
               
chr25:22412418-22412783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
89, 133
               

               
Conread position:
               
232-588
               

               
Cow position:
               
chr25:36351808-36351440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
87, 133
               

               
Conread position:
               
233-554
               

               
Cow position:
               
chr25:33691617-33691284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
81, 45
               

               
Conread position:
               
233-578
               

               
Cow position:
               
chr25:18182176-18181820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
233-588
               

               
Cow position:
               
chr25:6947997-6948358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
90, 54
               

               
Conread position:
               
233-588
               

               
Cow position:
               
chr25:13709076-13708713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
233-588
               

               
Cow position:
               
chr25:23351456-23351092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
89, 115
               

               
Conread position:
               
235-525
               

               
Cow position:
               
chr25:21289403-21289099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
237-547
               

               
Cow position:
               
chr25:5836902-5837229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
55, 150
               

               
Conread position:
               
237-555
               

               
Cow position:
               
chr25:9642413-9642085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
85, 176
               

               
Conread position:
               
251-588
               

               
Cow position:
               
chr25:3689461-3689111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 115
               

               
Conread position:
               
252-533
               

               
Cow position:
               
chr25:20211040-20211335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
73, 109
               

               
Conread position:
               
255-551
               

               
Cow position:
               
chr25:18934861-18935142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
173, 9
               

               
Conread position:
               
255-580
               

               
Cow position:
               
chr25:34672554-34672889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
74, 197
               

               
Conread position:
               
255-584
               

               
Cow position:
               
chr25:12234725-12235056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
46, 6
               

               
Conread position:
               
257-560
               

               
Cow position:
               
chr25:14266483-14266778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
116, 55
               

               
Conread position:
               
257-579
               

               
Cow position:
               
chr25:9957003-9957329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
56, 184
               

               
Conread position:
               
257-581
               

               
Cow position:
               
chr25:5341688-5341354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
257-587
               

               
Cow position:
               
chr25:12239112-12239440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
62, 188
               

               
Conread position:
               
257-588
               

               
Cow position:
               
chr25:1735285-1735614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
72, 63
               

               
Conread position:
               
258-580
               

               
Cow position:
               
chr25:19339850-19339517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
50, 57
               

               
Conread position:
               
258-580
               

               
Cow position:
               
chr25:35554720-35554387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
258-588
               

               
Cow position:
               
chr25:3141344-3141002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
64, 180
               

               
Conread position:
               
258-588
               

               
Cow position:
               
chr25:7069548-7069222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
86, 64
               

               
Conread position:
               
258-588
               

               
Cow position:
               
chr25:27016954-27017296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 107
               

               
Conread position:
               
260-588
               

               
Cow position:
               
chr25:25827503-25827157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
53, 267
               

               
Conread position:
               
261-581
               

               
Cow position:
               
chr25:6891504-6891824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
88, 47
               

               
Conread position:
               
261-588
               

               
Cow position:
               
chr25:7801172-7800832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
262-588
               

               
Cow position:
               
chr25:9023663-9023341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
64, 138
               

               
Conread position:
               
262-588
               

               
Cow position:
               
chr25:33989630-33989968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
60, 103
               

               
Conread position:
               
263-588
               

               
Cow position:
               
chr25:11097741-11097404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
73, 102
               

               
Conread position:
               
263-588
               

               
Cow position:
               
chr25:16068292-16067958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 119
               

               
Conread position:
               
264-588
               

               
Cow position:
               
chr25:35340359-35340031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
18, 95
               

               
Conread position:
               
269-588
               

               
Cow position:
               
chr25:13062884-13062553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
67, 96
               

               
Conread position:
               
275-584
               

               
Cow position:
               
chr25:23389261-23389572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
50, 92
               

               
Conread position:
               
277-477
               

               
Cow position:
               
chr25:23323215-23323011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 157
               

               
Conread position:
               
277-543
               

               
Cow position:
               
chr25:9961158-9961437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
277-588
               

               
Cow position:
               
chr25:5515029-5514705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 301
               

               
Conread position:
               
277-588
               

               
Cow position:
               
chr25:16737922-16738245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 221
               

               
Conread position:
               
278-494
               

               
Cow position:
               
chr25:26269923-26270142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 90
               

               
Conread position:
               
278-513
               

               
Cow position:
               
chr25:36033452-36033209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
31, 157
               

               
Conread position:
               
278-566
               

               
Cow position:
               
chr25:10330398-10330676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
44, 92
               

               
Conread position:
               
279-538
               

               
Cow position:
               
chr25:36027014-36026753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
279-542
               

               
Cow position:
               
chr25:16001512-16001779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
34, 158
               

               
Conread position:
               
279-588
               

               
Cow position:
               
chr25:8235223-8235544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
57, 86
               

               
Conread position:
               
280-587
               

               
Cow position:
               
chr25:38972843-38972530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
45, 62
               

               
Conread position:
               
280-588
               

               
Cow position:
               
chr25:16408717-16409036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
15, 61
               

               
Conread position:
               
281-534
               

               
Cow position:
               
chr25:22575513-22575768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
281-543
               

               
Cow position:
               
chr25:26058596-26058326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 112
               

               
Conread position:
               
281-553
               

               
Cow position:
               
chr25:35625173-35625440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
41, 80
               

               
Conread position:
               
281-588
               

               
Cow position:
               
chr25:5791789-5792107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
38, 76
               

               
Conread position:
               
283-588
               

               
Cow position:
               
chr25:14352311-14351994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
53, 82
               

               
Conread position:
               
283-588
               

               
Cow position:
               
chr25:14555686-14555369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
53, 82
               

               
Conread position:
               
283-588
               

               
Cow position:
               
chr25:29351911-29352228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
53, 82
               

               
Conread position:
               
283-588
               

               
Cow position:
               
chr25:38910549-38910232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
285-581
               

               
Cow position:
               
chr25:12750149-12750460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
287-571
               

               
Cow position:
               
chr25:9932076-9931787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
287-580
               

               
Cow position:
               
chr25:16977808-16977507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
287-583
               

               
Cow position:
               
chr25:18090932-18090623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
49, 78
               

               
Conread position:
               
287-587
               

               
Cow position:
               
chr25:28273324-28273012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 87
               

               
Conread position:
               
287-588
               

               
Cow position:
               
chr25:7763254-7762943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 76
               

               
Conread position:
               
287-588
               

               
Cow position:
               
chr25:10637499-10637810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
30, 76
               

               
Conread position:
               
287-588
               

               
Cow position:
               
chr25:12157892-12157579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
49, 78
               

               
Conread position:
               
287-588
               

               
Cow position:
               
chr25:13066973-13067286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
49, 68
               

               
Conread position:
               
287-588
               

               
Cow position:
               
chr25:17538404-17538717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
49, 72
               

               
Conread position:
               
287-588
               

               
Cow position:
               
chr25:19138558-19138871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
49, 78
               

               
Conread position:
               
287-588
               

               
Cow position:
               
chr25:29383319-29383631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 77
               

               
Conread position:
               
288-580
               

               
Cow position:
               
chr25:15275134-15274826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
288-584
               

               
Cow position:
               
chr25:31732730-31733036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 143
               

               
Conread position:
               
294-504
               

               
Cow position:
               
chr25:11978709-11978917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 94
               

               
Conread position:
               
295-551
               

               
Cow position:
               
chr25:15411771-15412037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
298-558
               

               
Cow position:
               
chr25:40151386-40151125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
298-581
               

               
Cow position:
               
chr25:15319906-15319622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
51, 23
               

               
Conread position:
               
299-588
               

               
Cow position:
               
chr25:7446137-7445849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
303-581
               

               
Cow position:
               
chr25:41364003-41364276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 27
               

               
Conread position:
               
304-558
               

               
Cow position:
               
chr25:7386738-7386471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
304-588
               

               
Cow position:
               
chr25:26849065-26849352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
305-581
               

               
Cow position:
               
chr25:15391343-15391625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
17, 92
               

               
Conread position:
               
305-588
               

               
Cow position:
               
chr25:10138071-10137803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
44, 19
               

               
Conread position:
               
308-547
               

               
Cow position:
               
chr25:15470085-15470331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 8
               

               
Conread position:
               
308-587
               

               
Cow position:
               
chr25:17681796-17682077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 8
               

               
Conread position:
               
308-588
               

               
Cow position:
               
chr25:41355811-41356101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
309-588
               

               
Cow position:
               
chr25:24726803-24727090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
40, 52
               

               
Conread position:
               
310-584
               

               
Cow position:
               
chr25:6966793-6967071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 96
               

               
Conread position:
               
310-587
               

               
Cow position:
               
chr25:13445938-13446223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
39, 130
               

               
Conread position:
               
310-588
               

               
Cow position:
               
chr25:4898076-4897793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 135
               

               
Conread position:
               
310-588
               

               
Cow position:
               
chr25:29561938-29561660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
311-471
               

               
Cow position:
               
chr25:18894742-18894908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
311-543
               

               
Cow position:
               
chr25:8918299-8918537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
16, 66
               

               
Conread position:
               
311-551
               

               
Cow position:
               
chr25:35345008-35344771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 89
               

               
Conread position:
               
311-554
               

               
Cow position:
               
chr25:3928023-3927772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-581
               

               
Cow position:
               
chr25:9744206-9743928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
311-584
               

               
Cow position:
               
chr25:18236392-18236673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
311-587
               

               
Cow position:
               
chr25:27142950-27143234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr25:5536667-5536952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr25:10012066-10012361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 129
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr25:12943044-12943329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr25:15618682-15618397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 40
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr25:17037437-17037152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr25:18155576-18155292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
38, 48
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr25:19531366-19531081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr25:20060052-20060332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
63, 40
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr25:22198568-22198283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr25:23600957-23601242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr25:25873006-25873291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr25:26319727-26319442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
63, 51
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr25:26618434-26618149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr25:27077044-27076759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr25:27146423-27146133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr25:29524881-29525166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr25:32609433-32609718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr25:34121107-34121392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr25:34257969-34257684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr25:35602413-35602128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr25:35649819-35649534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
311-588
               

               
Cow position:
               
chr25:36779474-36779192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 190
               

               
Conread position:
               
312-556
               

               
Cow position:
               
chr25:9596605-9596354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
312-580
               

               
Cow position:
               
chr25:20651248-20650970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
313-584
               

               
Cow position:
               
chr25:2111046-2110783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
8, 51
               

               
Conread position:
               
315-547
               

               
Cow position:
               
chr25:24405762-24406003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 127
               

               
Conread position:
               
315-588
               

               
Cow position:
               
chr25:16560620-16560894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 23
               

               
Conread position:
               
315-588
               

               
Cow position:
               
chr25:20395162-20394903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
316-544
               

               
Cow position:
               
chr25:6815214-6814991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
8, 53
               

               
Conread position:
               
316-550
               

               
Cow position:
               
chr25:24452205-24452434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
5, 38
               

               
Conread position:
               
316-557
               

               
Cow position:
               
chr25:30035517-30035279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
316-574
               

               
Cow position:
               
chr25:10365779-10366042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
316-580
               

               
Cow position:
               
chr25:13966688-13966960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
33, 45
               

               
Conread position:
               
316-581
               

               
Cow position:
               
chr25:8347480-8347212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
33, 93
               

               
Conread position:
               
316-581
               

               
Cow position:
               
chr25:12204441-12204173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
33, 119
               

               
Conread position:
               
316-587
               

               
Cow position:
               
chr25:2126438-2126166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
9, 69
               

               
Conread position:
               
316-587
               

               
Cow position:
               
chr25:10895751-10896030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
316-587
               

               
Cow position:
               
chr25:17419159-17418880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
316-587
               

               
Cow position:
               
chr25:17807801-17808080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 54
               

               
Conread position:
               
316-587
               

               
Cow position:
               
chr25:19586358-19586637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 54
               

               
Conread position:
               
316-588
               

               
Cow position:
               
chr25:2510732-2511012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 45
               

               
Conread position:
               
316-588
               

               
Cow position:
               
chr25:9415104-9414824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
316-588
               

               
Cow position:
               
chr25:14224832-14225100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 119
               

               
Conread position:
               
316-588
               

               
Cow position:
               
chr25:27594269-27593996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
33, 28
               

               
Conread position:
               
317-513
               

               
Cow position:
               
chr25:15286571-15286767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 69
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr25:13642340-13642585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 154
               

               
Conread position:
               
319-588
               

               
Cow position:
               
chr25:15694948-15694679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
320-580
               

               
Cow position:
               
chr25:40388497-40388752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
108, 30
               

               
Conread position:
               
320-584
               

               
Cow position:
               
chr25:17659534-17659257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
320-588
               

               
Cow position:
               
chr25:16231155-16231428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
29, 253
               

               
Conread position:
               
320-588
               

               
Cow position:
               
chr25:23410631-23410361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
30, 134
               

               
Conread position:
               
320-588
               

               
Cow position:
               
chr25:24136472-24136740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 108
               

               
Conread position:
               
321-548
               

               
Cow position:
               
chr25:18075640-18075405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
52, 192
               

               
Conread position:
               
321-588
               

               
Cow position:
               
chr25:40957021-40957290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
28, 119
               

               
Conread position:
               
322-521
               

               
Cow position:
               
chr25:7329512-7329309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
28, 116
               

               
Conread position:
               
323-588
               

               
Cow position:
               
chr25:25961925-25961658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
60, 107
               

               
Conread position:
               
324-563
               

               
Cow position:
               
chr25:27504214-27504464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
324-584
               

               
Cow position:
               
chr25:2136317-2136059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
25, 118
               

               
Conread position:
               
325-479
               

               
Cow position:
               
chr25:35110163-35110323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
325-531
               

               
Cow position:
               
chr25:6255974-6256183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
32, 122
               

               
Conread position:
               
325-537
               

               
Cow position:
               
chr25:4002763-4002543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 111
               

               
Conread position:
               
325-584
               

               
Cow position:
               
chr25:1096532-1096277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
40, 26
               

               
Conread position:
               
325-588
               

               
Cow position:
               
chr25:6424625-6424885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
22, 61
               

               
Conread position:
               
326-588
               

               
Cow position:
               
chr25:26112229-26111978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
23, 92
               

               
Conread position:
               
327-588
               

               
Cow position:
               
chr25:9396405-9396151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
330-581
               

               
Cow position:
               
chr25:41392702-41392960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
338-581
               

               
Cow position:
               
chr25:6740765-6740523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 84
               

               
Conread position:
               
338-588
               

               
Cow position:
               
chr25:13787904-13787647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
338-588
               

               
Cow position:
               
chr25:35566932-35567190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 169
               

               
Conread position:
               
345-552
               

               
Cow position:
               
chr25:32063784-32063576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
65, 18
               

               
Conread position:
               
345-588
               

               
Cow position:
               
chr25:27232277-27232032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
349-588
               

               
Cow position:
               
chr25:14274381-14274137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 132
               

               
Conread position:
               
361-553
               

               
Cow position:
               
chr25:10746825-10746634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 91
               

               
Conread position:
               
363-580
               

               
Cow position:
               
chr25:2499183-2498966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
155, 65
               

               
Conread position:
               
364-554
               

               
Cow position:
               
chr25:6003073-6003261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
151, 14
               

               
Conread position:
               
364-581
               

               
Cow position:
               
chr25:40658220-40658007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 66
               

               
Conread position:
               
364-584
               

               
Cow position:
               
chr25:22909925-22910147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
19, 107
               

               
Conread position:
               
365-562
               

               
Cow position:
               
chr25:35607804-35607997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 14
               

               
Conread position:
               
365-580
               

               
Cow position:
               
chr25:448427-448641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
365-581
               

               
Cow position:
               
chr25:12360128-12359909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 185
               

               
Conread position:
               
365-584
               

               
Cow position:
               
chr25:36120118-36119901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
150, 36
               

               
Conread position:
               
365-588
               

               
Cow position:
               
chr25:30816750-30816521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
366-549
               

               
Cow position:
               
chr25:24167985-24168163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
62, 68
               

               
Conread position:
               
367-581
               

               
Cow position:
               
chr25:10010803-10011016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 178
               

               
Conread position:
               
373-587
               

               
Cow position:
               
chr25:26282936-26282727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
122, 128
               

               
Conread position:
               
373-588
               

               
Cow position:
               
chr25:34342984-34343202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 129
               

               
Conread position:
               
373-588
               

               
Cow position:
               
chr25:34659191-34659408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 62
               

               
Conread position:
               
376-583
               

               
Cow position:
               
chr25:6774888-6775099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
9, 75
               

               
Conread position:
               
383-584
               

               
Cow position:
               
chr25:16038937-16039139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
383-588
               

               
Cow position:
               
chr25:8571966-8572174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
383-588
               

               
Cow position:
               
chr25:14954122-14954329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
20, 103
               

               
Conread position:
               
383-588
               

               
Cow position:
               
chr25:28863779-28863571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
20, 52
               

               
Conread position:
               
383-588
               

               
Cow position:
               
chr25:37469673-37469474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
174, 42
               

               
Conread position:
               
384-564
               

               
Cow position:
               
chr25:12195429-12195605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
135, 49
               

               
Conread position:
               
384-566
               

               
Cow position:
               
chr25:25783539-25783356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
384-579
               

               
Cow position:
               
chr25:15368578-15368381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
140, 47
               

               
Conread position:
               
384-584
               

               
Cow position:
               
chr25:26682468-26682265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
384-588
               

               
Cow position:
               
chr25:5271492-5271283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
384-588
               

               
Cow position:
               
chr25:8482409-8482617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
19, 192
               

               
Conread position:
               
384-588
               

               
Cow position:
               
chr25:18969175-18968968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
385-584
               

               
Cow position:
               
chr25:14104182-14103997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
134, 43
               

               
Conread position:
               
385-585
               

               
Cow position:
               
chr25:25948501-25948696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
385-588
               

               
Cow position:
               
chr25:11269301-11269502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
386-563
               

               
Cow position:
               
chr25:19366522-19366688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
386-588
               

               
Cow position:
               
chr25:9842900-9842701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
128, 99
               

               
Conread position:
               
387-523
               

               
Cow position:
               
chr25:36557585-36557449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
387-579
               

               
Cow position:
               
chr25:28327198-28327385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
388-585
               

               
Cow position:
               
chr25:25866818-25866630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
141, 40
               

               
Conread position:
               
390-581
               

               
Cow position:
               
chr25:36871753-36871562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
129, 21
               

               
Conread position:
               
392-584
               

               
Cow position:
               
chr25:7609213-7609018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
392-585
               

               
Cow position:
               
chr25:10366803-10366987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
36, 24
               

               
Conread position:
               
394-588
               

               
Cow position:
               
chr25:17993625-17993822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
396-578
               

               
Cow position:
               
chr25:9625699-9625513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
396-588
               

               
Cow position:
               
chr25:41044703-41044512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
123, 41
               

               
Conread position:
               
397-541
               

               
Cow position:
               
chr25:13566732-13566588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
398-513
               

               
Cow position:
               
chr25:35902126-35902012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
400-535
               

               
Cow position:
               
chr25:17475635-17475774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
400-541
               

               
Cow position:
               
chr25:433201-433333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
400-578
               

               
Cow position:
               
chr25:26225159-26225333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
400-588
               

               
Cow position:
               
chr25:16688364-16688554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
401-543
               

               
Cow position:
               
chr25:19633738-19633876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
401-551
               

               
Cow position:
               
chr25:7440732-7440588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
401-554
               

               
Cow position:
               
chr25:17712412-17712264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
123, 27
               

               
Conread position:
               
401-571
               

               
Cow position:
               
chr25:4488610-4488445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
111, 27
               

               
Conread position:
               
401-577
               

               
Cow position:
               
chr25:4049912-4049741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
401-578
               

               
Cow position:
               
chr25:12840317-12840145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
114, 43
               

               
Conread position:
               
401-579
               

               
Cow position:
               
chr25:27621967-27621787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
118, 93
               

               
Conread position:
               
401-583
               

               
Cow position:
               
chr25:24227452-24227639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
401-588
               

               
Cow position:
               
chr25:13720658-13720844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
117, 25
               

               
Conread position:
               
401-588
               

               
Cow position:
               
chr25:35618019-35617833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
401-588
               

               
Cow position:
               
chr25:39385946-39386135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
95, 100
               

               
Conread position:
               
402-541
               

               
Cow position:
               
chr25:14191412-14191553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 31
               

               
Conread position:
               
402-578
               

               
Cow position:
               
chr25:21961126-21961300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
26, 32
               

               
Conread position:
               
402-579
               

               
Cow position:
               
chr25:34618220-34618399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-581
               

               
Cow position:
               
chr25:12359430-12359253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
80, 48
               

               
Conread position:
               
402-581
               

               
Cow position:
               
chr25:32848442-32848622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
117, 41
               

               
Conread position:
               
402-584
               

               
Cow position:
               
chr25:15412910-15412726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-584
               

               
Cow position:
               
chr25:26923733-26923549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-587
               

               
Cow position:
               
chr25:12753033-12753220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-587
               

               
Cow position:
               
chr25:36127015-36127202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr25:3167295-3167483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr25:7717827-7717641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
117, 63
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr25:10699038-10698850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
26, 32
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr25:12176314-12176502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr25:12317955-12318143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr25:13761485-13761305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
42, 101
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr25:13960946-13960763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
117, 142
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr25:16242091-16242273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
117, 23
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr25:17427142-17426954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr25:17585048-17585237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 179
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr25:18044616-18044804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr25:18073436-18073248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 32
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr25:18323469-18323657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr25:19912658-19912845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
117, 47
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr25:20771449-20771637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
31, 24
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr25:21121469-21121281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr25:23334896-23334708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr25:23738570-23738758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr25:26756357-26756169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr25:26882101-26881912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr25:26940256-26940068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
26, 32
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr25:32513958-32514146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr25:33589518-33589707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr25:35589959-35589771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
402-588
               

               
Cow position:
               
chr25:38569718-38569898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
116, 26
               

               
Conread position:
               
403-588
               

               
Cow position:
               
chr25:17994410-17994596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
116, 63
               

               
Conread position:
               
404-581
               

               
Cow position:
               
chr25:11051256-11051086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
24, 31
               

               
Conread position:
               
404-587
               

               
Cow position:
               
chr25:31586919-31586737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
115, 29
               

               
Conread position:
               
405-587
               

               
Cow position:
               
chr25:35655439-35655259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
114, 28
               

               
Conread position:
               
406-588
               

               
Cow position:
               
chr25:26910875-26911060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
407-547
               

               
Cow position:
               
chr25:16691395-16691253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
407-588
               

               
Cow position:
               
chr25:14822872-14823050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
118, 41
               

               
Conread position:
               
409-584
               

               
Cow position:
               
chr25:33687020-33687198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
109, 7
               

               
Conread position:
               
412-577
               

               
Cow position:
               
chr25:18272135-18271968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
107, 14
               

               
Conread position:
               
416-541
               

               
Cow position:
               
chr25:12174635-12174762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
12, 17
               

               
Conread position:
               
416-581
               

               
Cow position:
               
chr25:22730501-22730352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
416-588
               

               
Cow position:
               
chr25:14959831-14960004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
417-588
               

               
Cow position:
               
chr25:8485667-8485836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 17
               

               
Conread position:
               
418-543
               

               
Cow position:
               
chr25:14809179-14809051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
92, 57
               

               
Conread position:
               
426-581
               

               
Cow position:
               
chr25:29336352-29336193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
427-588
               

               
Cow position:
               
chr25:3969254-3969092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
92, 43
               

               
Conread position:
               
427-588
               

               
Cow position:
               
chr25:34156531-34156370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 6
               

               
Conread position:
               
432-543
               

               
Cow position:
               
chr25:11823674-11823784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
432-563
               

               
Cow position:
               
chr25:22346497-22346364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
432-578
               

               
Cow position:
               
chr25:5462029-5461881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
432-580
               

               
Cow position:
               
chr25:18241007-18240857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
432-580
               

               
Cow position:
               
chr25:25510746-25510599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 129
               

               
Conread position:
               
432-580
               

               
Cow position:
               
chr25:29801885-29802035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
432-584
               

               
Cow position:
               
chr25:6117989-6118141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 27
               

               
Conread position:
               
432-584
               

               
Cow position:
               
chr25:17005913-17006067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
432-587
               

               
Cow position:
               
chr25:16137009-16136853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
64, 69
               

               
Conread position:
               
432-588
               

               
Cow position:
               
chr25:4857638-4857796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
86, 140
               

               
Conread position:
               
432-588
               

               
Cow position:
               
chr25:6606503-6606662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
432-588
               

               
Cow position:
               
chr25:7259402-7259244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
432-588
               

               
Cow position:
               
chr25:10158601-10158443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
432-588
               

               
Cow position:
               
chr25:10212350-10212192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
432-588
               

               
Cow position:
               
chr25:11294649-11294489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
432-588
               

               
Cow position:
               
chr25:13840265-13840422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
432-588
               

               
Cow position:
               
chr25:24654316-24654473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
87, 24
               

               
Conread position:
               
432-588
               

               
Cow position:
               
chr25:26187678-26187835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
432-588
               

               
Cow position:
               
chr25:28274597-28274747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
433-581
               

               
Cow position:
               
chr25:10580228-10580385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
435-574
               

               
Cow position:
               
chr25:25581650-25581520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
435-588
               

               
Cow position:
               
chr25:4860594-4860750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
440-566
               

               
Cow position:
               
chr25:23920006-23920135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
440-578
               

               
Cow position:
               
chr25:17119341-17119479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
75, 10
               

               
Conread position:
               
440-578
               

               
Cow position:
               
chr25:33839233-33839094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
79, 14
               

               
Conread position:
               
440-588
               

               
Cow position:
               
chr25:8656141-8655991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
440-588
               

               
Cow position:
               
chr25:20434398-20434251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
79, 127
               

               
Conread position:
               
440-588
               

               
Cow position:
               
chr25:34501834-34501985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
442-551
               

               
Cow position:
               
chr25:8961307-8961196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
451-575
               

               
Cow position:
               
chr25:22549778-22549905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
451-588
               

               
Cow position:
               
chr25:5232-5093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
458-579
               

               
Cow position:
               
chr25:9349429-9349552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
458-588
               

               
Cow position:
               
chr25:6421223-6421355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
468-588
               

               
Cow position:
               
chr25:14720301-14720180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
468-588
               

               
Cow position:
               
chr25:17992323-17992445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
469-588
               

               
Cow position:
               
chr25:32278212-32278333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               
Show alignments to all cow chromosomes.