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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8025P15.3
        

               
Conread position:
               
170-662
               

               
Cow position:
               
chr10:12315340-12314866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
65, 21
               

               
Conread position:
               
171-381
               

               
Cow position:
               
chr10:29084259-29084056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
131, 8
               

               
Conread position:
               
183-648
               

               
Cow position:
               
chr10:22321695-22321236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
125, 33
               

               
Conread position:
               
185-682
               

               
Cow position:
               
chr10:41984706-41985210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 17
               

               
Conread position:
               
187-642
               

               
Cow position:
               
chr10:58557366-58556910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
5, 36
               

               
Conread position:
               
188-364
               

               
Cow position:
               
chr10:52889058-52889231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
101, 27
               

               
Conread position:
               
188-640
               

               
Cow position:
               
chr10:45728761-45729205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 188
               

               
Conread position:
               
191-564
               

               
Cow position:
               
chr10:29689156-29689528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 26
               

               
Conread position:
               
191-652
               

               
Cow position:
               
chr10:23948741-23949216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 223
               

               
Conread position:
               
192-409
               

               
Cow position:
               
chr10:51878311-51878098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
198, 57
               

               
Conread position:
               
194-650
               

               
Cow position:
               
chr10:38518463-38518923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 7
               

               
Conread position:
               
195-545
               

               
Cow position:
               
chr10:1069970-1070326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 34
               

               
Conread position:
               
196-658
               

               
Cow position:
               
chr10:6568398-6567934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
198-647
               

               
Cow position:
               
chr10:30224860-30224393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
75, 132
               

               
Conread position:
               
199-637
               

               
Cow position:
               
chr10:8759996-8760404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 50
               

               
Conread position:
               
199-647
               

               
Cow position:
               
chr10:67442933-67443395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
87, 74
               

               
Conread position:
               
200-632
               

               
Cow position:
               
chr10:16649765-16650193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
201-459
               

               
Cow position:
               
chr10:65558527-65558786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
126, 230
               

               
Conread position:
               
201-560
               

               
Cow position:
               
chr10:49624935-49624563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 228
               

               
Conread position:
               
201-638
               

               
Cow position:
               
chr10:19704344-19704783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 213
               

               
Conread position:
               
201-649
               

               
Cow position:
               
chr10:34654925-34655403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
72, 189
               

               
Conread position:
               
201-651
               

               
Cow position:
               
chr10:65071950-65072404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 66
               

               
Conread position:
               
201-656
               

               
Cow position:
               
chr10:20109783-20110230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
201-665
               

               
Cow position:
               
chr10:40646082-40645626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
202-366
               

               
Cow position:
               
chr10:61113353-61113190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
82, 41
               

               
Conread position:
               
202-523
               

               
Cow position:
               
chr10:16683644-16683978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
79, 43
               

               
Conread position:
               
202-537
               

               
Cow position:
               
chr10:51220909-51221246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
202-648
               

               
Cow position:
               
chr10:30360680-30360239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
202-648
               

               
Cow position:
               
chr10:51944543-51944072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
70, 260
               

               
Conread position:
               
202-657
               

               
Cow position:
               
chr10:39081561-39081094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 110
               

               
Conread position:
               
202-658
               

               
Cow position:
               
chr10:3115648-3115187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 15
               

               
Conread position:
               
202-666
               

               
Cow position:
               
chr10:62517049-62516565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 221
               

               
Conread position:
               
202-682
               

               
Cow position:
               
chr10:669028-668556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
105, 32
               

               
Conread position:
               
203-382
               

               
Cow position:
               
chr10:32560868-32560683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
203-419
               

               
Cow position:
               
chr10:3365622-3365828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
51, 109
               

               
Conread position:
               
203-630
               

               
Cow position:
               
chr10:33890915-33891360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 129
               

               
Conread position:
               
203-661
               

               
Cow position:
               
chr10:60388597-60389061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 50
               

               
Conread position:
               
204-324
               

               
Cow position:
               
chr10:8680891-8681010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
204-446
               

               
Cow position:
               
chr10:50324232-50324474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
73, 136
               

               
Conread position:
               
204-457
               

               
Cow position:
               
chr10:69226093-69225836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
65, 152
               

               
Conread position:
               
204-480
               

               
Cow position:
               
chr10:23404363-23404084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 45
               

               
Conread position:
               
204-594
               

               
Cow position:
               
chr10:28152213-28152619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
72, 43
               

               
Conread position:
               
204-618
               

               
Cow position:
               
chr10:59572075-59571638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
58, 106
               

               
Conread position:
               
204-631
               

               
Cow position:
               
chr10:15391655-15391242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 109
               

               
Conread position:
               
204-632
               

               
Cow position:
               
chr10:21447750-21448168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 69
               

               
Conread position:
               
204-638
               

               
Cow position:
               
chr10:51925603-51925139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
204-639
               

               
Cow position:
               
chr10:43439037-43438588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
104, 69
               

               
Conread position:
               
204-640
               

               
Cow position:
               
chr10:24753319-24752875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
60, 81
               

               
Conread position:
               
204-646
               

               
Cow position:
               
chr10:69544178-69544615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 55
               

               
Conread position:
               
204-647
               

               
Cow position:
               
chr10:28721962-28721501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
13, 224
               

               
Conread position:
               
204-648
               

               
Cow position:
               
chr10:8404389-8403911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
79, 213
               

               
Conread position:
               
204-650
               

               
Cow position:
               
chr10:35911598-35912037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
204-655
               

               
Cow position:
               
chr10:53179445-53179005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
71, 34
               

               
Conread position:
               
204-659
               

               
Cow position:
               
chr10:24786273-24785803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 121
               

               
Conread position:
               
204-659
               

               
Cow position:
               
chr10:55012298-55011838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 111
               

               
Conread position:
               
204-661
               

               
Cow position:
               
chr10:10124507-10124039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
204-661
               

               
Cow position:
               
chr10:23055910-23056384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
41, 215
               

               
Conread position:
               
204-661
               

               
Cow position:
               
chr10:67144760-67144292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 38
               

               
Conread position:
               
205-366
               

               
Cow position:
               
chr10:7908541-7908702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
205-581
               

               
Cow position:
               
chr10:38429388-38429771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 44
               

               
Conread position:
               
205-627
               

               
Cow position:
               
chr10:17863745-17863314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 17
               

               
Conread position:
               
205-632
               

               
Cow position:
               
chr10:66753412-66752945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
205-648
               

               
Cow position:
               
chr10:22527738-22528191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
123, 211
               

               
Conread position:
               
205-655
               

               
Cow position:
               
chr10:9341572-9342036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 191
               

               
Conread position:
               
206-397
               

               
Cow position:
               
chr10:20952293-20952113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
206-416
               

               
Cow position:
               
chr10:52244484-52244699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
206-459
               

               
Cow position:
               
chr10:11403977-11404227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
69, 58
               

               
Conread position:
               
206-617
               

               
Cow position:
               
chr10:23576721-23576284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
69, 115
               

               
Conread position:
               
206-627
               

               
Cow position:
               
chr10:8412891-8413320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
206-632
               

               
Cow position:
               
chr10:42454282-42453863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 145
               

               
Conread position:
               
206-638
               

               
Cow position:
               
chr10:14947434-14946986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
69, 169
               

               
Conread position:
               
206-638
               

               
Cow position:
               
chr10:48255062-48255504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 19
               

               
Conread position:
               
206-640
               

               
Cow position:
               
chr10:48741001-48741440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 67
               

               
Conread position:
               
206-645
               

               
Cow position:
               
chr10:39387629-39387171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
70, 236
               

               
Conread position:
               
206-646
               

               
Cow position:
               
chr10:4311342-4310899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
47, 99
               

               
Conread position:
               
206-647
               

               
Cow position:
               
chr10:56475635-56475179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
60, 83
               

               
Conread position:
               
206-647
               

               
Cow position:
               
chr10:64596570-64596137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 44
               

               
Conread position:
               
206-648
               

               
Cow position:
               
chr10:63940952-63940487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
69, 107
               

               
Conread position:
               
206-654
               

               
Cow position:
               
chr10:54477258-54476815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
157, 67
               

               
Conread position:
               
206-658
               

               
Cow position:
               
chr10:15871710-15872164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
207-326
               

               
Cow position:
               
chr10:20514473-20514353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
207-357
               

               
Cow position:
               
chr10:21712867-21712711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
207-426
               

               
Cow position:
               
chr10:11317114-11316893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
68, 93
               

               
Conread position:
               
207-458
               

               
Cow position:
               
chr10:62325772-62325525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
75, 97
               

               
Conread position:
               
207-618
               

               
Cow position:
               
chr10:67020777-67020367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
77, 146
               

               
Conread position:
               
207-637
               

               
Cow position:
               
chr10:25475712-25475299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
83, 66
               

               
Conread position:
               
207-640
               

               
Cow position:
               
chr10:33002101-33002522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
207-646
               

               
Cow position:
               
chr10:21082550-21082107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 19
               

               
Conread position:
               
207-648
               

               
Cow position:
               
chr10:41408447-41407996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
13, 213
               

               
Conread position:
               
207-656
               

               
Cow position:
               
chr10:9575869-9576337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
68, 234
               

               
Conread position:
               
207-656
               

               
Cow position:
               
chr10:30449901-30450356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 232
               

               
Conread position:
               
208-378
               

               
Cow position:
               
chr10:45613950-45614119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
76, 123
               

               
Conread position:
               
208-381
               

               
Cow position:
               
chr10:61426574-61426752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
208-399
               

               
Cow position:
               
chr10:68566333-68566148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
76, 42
               

               
Conread position:
               
208-421
               

               
Cow position:
               
chr10:34168033-34167830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
208-450
               

               
Cow position:
               
chr10:31368574-31368816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
208-459
               

               
Cow position:
               
chr10:9529835-9530076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
208-521
               

               
Cow position:
               
chr10:33240521-33240840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
65, 117
               

               
Conread position:
               
208-538
               

               
Cow position:
               
chr10:11497382-11497068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 150
               

               
Conread position:
               
208-545
               

               
Cow position:
               
chr10:908112-907780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
79, 87
               

               
Conread position:
               
208-581
               

               
Cow position:
               
chr10:27538661-27538292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 89
               

               
Conread position:
               
208-602
               

               
Cow position:
               
chr10:8649162-8648770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 31
               

               
Conread position:
               
208-617
               

               
Cow position:
               
chr10:6490611-6491032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
208-621
               

               
Cow position:
               
chr10:59151701-59152126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
68, 239
               

               
Conread position:
               
208-639
               

               
Cow position:
               
chr10:3999069-3998627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 65
               

               
Conread position:
               
208-640
               

               
Cow position:
               
chr10:6011891-6012316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 141
               

               
Conread position:
               
208-642
               

               
Cow position:
               
chr10:54504782-54504317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
65, 224
               

               
Conread position:
               
208-647
               

               
Cow position:
               
chr10:25479252-25478815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 76
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr10:69532122-69531971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 33
               

               
Conread position:
               
209-377
               

               
Cow position:
               
chr10:19601676-19601843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
72, 98
               

               
Conread position:
               
209-398
               

               
Cow position:
               
chr10:66791388-66791201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
209-427
               

               
Cow position:
               
chr10:68251971-68251756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
209-559
               

               
Cow position:
               
chr10:12486422-12486066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
55, 32
               

               
Conread position:
               
209-582
               

               
Cow position:
               
chr10:33732724-33733093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
149, 28
               

               
Conread position:
               
209-582
               

               
Cow position:
               
chr10:41771011-41771389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
21, 17
               

               
Conread position:
               
209-601
               

               
Cow position:
               
chr10:37708848-37709280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
66, 403
               

               
Conread position:
               
209-607
               

               
Cow position:
               
chr10:6038184-6038584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 42
               

               
Conread position:
               
209-639
               

               
Cow position:
               
chr10:51289422-51288973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
209-648
               

               
Cow position:
               
chr10:54947966-54948412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
64, 213
               

               
Conread position:
               
209-650
               

               
Cow position:
               
chr10:57461531-57461073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
67, 232
               

               
Conread position:
               
209-657
               

               
Cow position:
               
chr10:2849507-2849055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 75
               

               
Conread position:
               
209-666
               

               
Cow position:
               
chr10:1428182-1427734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
119, 32
               

               
Conread position:
               
209-666
               

               
Cow position:
               
chr10:37529096-37529580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 102
               

               
Conread position:
               
210-331
               

               
Cow position:
               
chr10:49060591-49060471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
74, 42
               

               
Conread position:
               
210-381
               

               
Cow position:
               
chr10:35716934-35717101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
210-382
               

               
Cow position:
               
chr10:52069816-52069992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 134
               

               
Conread position:
               
210-383
               

               
Cow position:
               
chr10:43250208-43250375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
74, 40
               

               
Conread position:
               
210-393
               

               
Cow position:
               
chr10:49586307-49586492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
210-457
               

               
Cow position:
               
chr10:4827864-4828111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
67, 151
               

               
Conread position:
               
210-607
               

               
Cow position:
               
chr10:45606275-45606676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 57
               

               
Conread position:
               
210-632
               

               
Cow position:
               
chr10:64285623-64286071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 104
               

               
Conread position:
               
210-646
               

               
Cow position:
               
chr10:27576614-27576190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 240
               

               
Conread position:
               
210-648
               

               
Cow position:
               
chr10:24732456-24732023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 21
               

               
Conread position:
               
210-648
               

               
Cow position:
               
chr10:34898133-34897707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
66, 31
               

               
Conread position:
               
210-682
               

               
Cow position:
               
chr10:23096622-23097089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 35
               

               
Conread position:
               
210-685
               

               
Cow position:
               
chr10:51845033-51844576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
73, 210
               

               
Conread position:
               
211-484
               

               
Cow position:
               
chr10:30741532-30741261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
70, 34
               

               
Conread position:
               
211-567
               

               
Cow position:
               
chr10:26145253-26145619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
118, 101
               

               
Conread position:
               
211-577
               

               
Cow position:
               
chr10:9568473-9568845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
178, 15
               

               
Conread position:
               
211-621
               

               
Cow position:
               
chr10:28176226-28176656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
68, 56
               

               
Conread position:
               
211-631
               

               
Cow position:
               
chr10:19590606-19591038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 46
               

               
Conread position:
               
211-632
               

               
Cow position:
               
chr10:22479569-22479998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 222
               

               
Conread position:
               
211-648
               

               
Cow position:
               
chr10:49146683-49146242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
64, 31
               

               
Conread position:
               
212-524
               

               
Cow position:
               
chr10:19126759-19127074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
212-618
               

               
Cow position:
               
chr10:28395144-28395552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
212-632
               

               
Cow position:
               
chr10:42755470-42755058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 27
               

               
Conread position:
               
212-637
               

               
Cow position:
               
chr10:50776862-50776424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 68
               

               
Conread position:
               
212-648
               

               
Cow position:
               
chr10:9288203-9287775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
81, 64
               

               
Conread position:
               
213-640
               

               
Cow position:
               
chr10:21462391-21461958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 21
               

               
Conread position:
               
213-646
               

               
Cow position:
               
chr10:49045992-49045555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
93, 42
               

               
Conread position:
               
213-656
               

               
Cow position:
               
chr10:2406977-2407407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 43
               

               
Conread position:
               
215-362
               

               
Cow position:
               
chr10:64364371-64364222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
215-381
               

               
Cow position:
               
chr10:45299961-45299798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
215-631
               

               
Cow position:
               
chr10:69567993-69567580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
111, 58
               

               
Conread position:
               
215-632
               

               
Cow position:
               
chr10:721462-721024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
61, 227
               

               
Conread position:
               
215-632
               

               
Cow position:
               
chr10:50533706-50534145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
41, 95
               

               
Conread position:
               
215-637
               

               
Cow position:
               
chr10:52589527-52589972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 221
               

               
Conread position:
               
215-646
               

               
Cow position:
               
chr10:29339244-29339682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 64
               

               
Conread position:
               
215-648
               

               
Cow position:
               
chr10:10469135-10468688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
76, 24
               

               
Conread position:
               
215-666
               

               
Cow position:
               
chr10:56705432-56705892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 212
               

               
Conread position:
               
215-666
               

               
Cow position:
               
chr10:58608256-58607800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 196
               

               
Conread position:
               
216-380
               

               
Cow position:
               
chr10:875652-875487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 145
               

               
Conread position:
               
216-649
               

               
Cow position:
               
chr10:2857218-2856799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 58
               

               
Conread position:
               
217-370
               

               
Cow position:
               
chr10:1041349-1041195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
217-426
               

               
Cow position:
               
chr10:31250589-31250796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
217-667
               

               
Cow position:
               
chr10:37668009-37668462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
111, 61
               

               
Conread position:
               
218-618
               

               
Cow position:
               
chr10:17583887-17584289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
73, 23
               

               
Conread position:
               
218-656
               

               
Cow position:
               
chr10:38449162-38449597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
59, 106
               

               
Conread position:
               
221-648
               

               
Cow position:
               
chr10:32584060-32583625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 81
               

               
Conread position:
               
222-421
               

               
Cow position:
               
chr10:53761973-53762171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
24, 90
               

               
Conread position:
               
222-568
               

               
Cow position:
               
chr10:41794569-41794923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
11, 72
               

               
Conread position:
               
222-611
               

               
Cow position:
               
chr10:59153516-59153893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
222-638
               

               
Cow position:
               
chr10:49455947-49456355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 8
               

               
Conread position:
               
223-471
               

               
Cow position:
               
chr10:66874675-66874924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
54, 33
               

               
Conread position:
               
223-646
               

               
Cow position:
               
chr10:47789165-47788755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 152
               

               
Conread position:
               
223-649
               

               
Cow position:
               
chr10:10135132-10134687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 65
               

               
Conread position:
               
224-421
               

               
Cow position:
               
chr10:9794518-9794719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
60, 25
               

               
Conread position:
               
224-661
               

               
Cow position:
               
chr10:13390903-13391356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
104, 216
               

               
Conread position:
               
226-632
               

               
Cow position:
               
chr10:26620419-26620826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 8
               

               
Conread position:
               
226-661
               

               
Cow position:
               
chr10:58746108-58746531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 23
               

               
Conread position:
               
228-525
               

               
Cow position:
               
chr10:30753315-30753035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
15, 127
               

               
Conread position:
               
229-699
               

               
Cow position:
               
chr10:11032359-11032840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 87
               

               
Conread position:
               
230-640
               

               
Cow position:
               
chr10:24871303-24870882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
231-621
               

               
Cow position:
               
chr10:11221845-11221447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
231-645
               

               
Cow position:
               
chr10:39109881-39110283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
232-501
               

               
Cow position:
               
chr10:15873940-15874211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
52, 35
               

               
Conread position:
               
232-630
               

               
Cow position:
               
chr10:23506354-23506758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
233-648
               

               
Cow position:
               
chr10:50015864-50016283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
235-661
               

               
Cow position:
               
chr10:52296621-52296194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 29
               

               
Conread position:
               
238-594
               

               
Cow position:
               
chr10:40163807-40164165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
91, 15
               

               
Conread position:
               
238-640
               

               
Cow position:
               
chr10:6852391-6851989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
51, 15
               

               
Conread position:
               
238-655
               

               
Cow position:
               
chr10:59663841-59664262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
26, 31
               

               
Conread position:
               
240-433
               

               
Cow position:
               
chr10:19817986-19817795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 6
               

               
Conread position:
               
242-399
               

               
Cow position:
               
chr10:6921845-6921689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
41, 62
               

               
Conread position:
               
242-608
               

               
Cow position:
               
chr10:22396381-22396005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
10, 122
               

               
Conread position:
               
243-371
               

               
Cow position:
               
chr10:2266921-2267050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
243-417
               

               
Cow position:
               
chr10:8330744-8330564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
245-646
               

               
Cow position:
               
chr10:54731135-54730723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 56
               

               
Conread position:
               
247-598
               

               
Cow position:
               
chr10:53820805-53821153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 26
               

               
Conread position:
               
248-632
               

               
Cow position:
               
chr10:5151464-5151071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
250-563
               

               
Cow position:
               
chr10:50044525-50044851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
250-638
               

               
Cow position:
               
chr10:28038814-28039212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 174
               

               
Conread position:
               
251-648
               

               
Cow position:
               
chr10:26209129-26209552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
251-648
               

               
Cow position:
               
chr10:38015986-38015600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 45
               

               
Conread position:
               
251-661
               

               
Cow position:
               
chr10:15115727-15115312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
253-416
               

               
Cow position:
               
chr10:1478316-1478486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
24, 162
               

               
Conread position:
               
253-644
               

               
Cow position:
               
chr10:33665955-33665553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 26
               

               
Conread position:
               
256-646
               

               
Cow position:
               
chr10:20132417-20132816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
8, 14
               

               
Conread position:
               
257-648
               

               
Cow position:
               
chr10:10751878-10752271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
7, 47
               

               
Conread position:
               
259-637
               

               
Cow position:
               
chr10:33215904-33215517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
5, 33
               

               
Conread position:
               
259-640
               

               
Cow position:
               
chr10:5599896-5600277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 28
               

               
Conread position:
               
259-648
               

               
Cow position:
               
chr10:66127962-66127566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
5, 27
               

               
Conread position:
               
259-690
               

               
Cow position:
               
chr10:31027534-31027978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
5, 29
               

               
Conread position:
               
260-646
               

               
Cow position:
               
chr10:50360019-50359626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
263-567
               

               
Cow position:
               
chr10:7817211-7816899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
263-644
               

               
Cow position:
               
chr10:45371159-45370772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
263-645
               

               
Cow position:
               
chr10:23912408-23912784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
65, 21
               

               
Conread position:
               
263-647
               

               
Cow position:
               
chr10:22390700-22390307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
263-647
               

               
Cow position:
               
chr10:31400794-31401188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
66, 22
               

               
Conread position:
               
263-656
               

               
Cow position:
               
chr10:13765060-13765462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
264-648
               

               
Cow position:
               
chr10:56828211-56828611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
265-646
               

               
Cow position:
               
chr10:14787453-14787820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
265-649
               

               
Cow position:
               
chr10:13311836-13311440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
267-648
               

               
Cow position:
               
chr10:35975641-35975269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 21
               

               
Conread position:
               
271-647
               

               
Cow position:
               
chr10:57786436-57786047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
37, 30
               

               
Conread position:
               
271-652
               

               
Cow position:
               
chr10:24763580-24763184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 30
               

               
Conread position:
               
272-615
               

               
Cow position:
               
chr10:50182956-50183304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 25
               

               
Conread position:
               
273-566
               

               
Cow position:
               
chr10:13617558-13617848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
273-646
               

               
Cow position:
               
chr10:10043012-10043379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
35, 28
               

               
Conread position:
               
274-544
               

               
Cow position:
               
chr10:63884033-63883767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
274-660
               

               
Cow position:
               
chr10:53357990-53357594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
34, 24
               

               
Conread position:
               
276-621
               

               
Cow position:
               
chr10:31855427-31855066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
276-623
               

               
Cow position:
               
chr10:35792018-35791668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
58, 130
               

               
Conread position:
               
276-640
               

               
Cow position:
               
chr10:34430133-34430497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 18
               

               
Conread position:
               
276-646
               

               
Cow position:
               
chr10:31528062-31527705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
30, 25
               

               
Conread position:
               
276-646
               

               
Cow position:
               
chr10:57458803-57458430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 84
               

               
Conread position:
               
276-648
               

               
Cow position:
               
chr10:31911013-31910655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 51
               

               
Conread position:
               
276-661
               

               
Cow position:
               
chr10:22049347-22048949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
187, 58
               

               
Conread position:
               
276-661
               

               
Cow position:
               
chr10:25699741-25699361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
30, 8
               

               
Conread position:
               
277-534
               

               
Cow position:
               
chr10:25978202-25978453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
5, 68
               

               
Conread position:
               
277-624
               

               
Cow position:
               
chr10:46067197-46066878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
10, 89
               

               
Conread position:
               
277-647
               

               
Cow position:
               
chr10:8077070-8077444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 129
               

               
Conread position:
               
277-656
               

               
Cow position:
               
chr10:49038676-49038261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
277-660
               

               
Cow position:
               
chr10:65791905-65791539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 78
               

               
Conread position:
               
278-618
               

               
Cow position:
               
chr10:36896495-36896145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
278-632
               

               
Cow position:
               
chr10:35802270-35802644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
50, 167
               

               
Conread position:
               
278-638
               

               
Cow position:
               
chr10:6235357-6235704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
28, 23
               

               
Conread position:
               
278-646
               

               
Cow position:
               
chr10:23886370-23886734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
278-648
               

               
Cow position:
               
chr10:40420759-40421136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
278-649
               

               
Cow position:
               
chr10:27828412-27828039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
51, 131
               

               
Conread position:
               
278-654
               

               
Cow position:
               
chr10:29919748-29920128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
28, 23
               

               
Conread position:
               
278-682
               

               
Cow position:
               
chr10:42746005-42745589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
50, 15
               

               
Conread position:
               
279-411
               

               
Cow position:
               
chr10:48135298-48135429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
279-480
               

               
Cow position:
               
chr10:35306892-35307085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
279-554
               

               
Cow position:
               
chr10:4184285-4183995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
279-580
               

               
Cow position:
               
chr10:38739618-38739330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
279-589
               

               
Cow position:
               
chr10:24375633-24375319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 55
               

               
Conread position:
               
279-598
               

               
Cow position:
               
chr10:64042172-64041842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
279-613
               

               
Cow position:
               
chr10:29252253-29251907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-615
               

               
Cow position:
               
chr10:60961024-60960683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
279-618
               

               
Cow position:
               
chr10:24312800-24313149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 25
               

               
Conread position:
               
279-630
               

               
Cow position:
               
chr10:22341666-22341293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 18
               

               
Conread position:
               
279-630
               

               
Cow position:
               
chr10:24132734-24133093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
49, 131
               

               
Conread position:
               
279-630
               

               
Cow position:
               
chr10:52113584-52113938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
279-632
               

               
Cow position:
               
chr10:37014723-37014364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
279-633
               

               
Cow position:
               
chr10:11081053-11080682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-637
               

               
Cow position:
               
chr10:29279535-29279165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 27
               

               
Conread position:
               
279-638
               

               
Cow position:
               
chr10:18042269-18041904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-640
               

               
Cow position:
               
chr10:19372247-19372611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
49, 143
               

               
Conread position:
               
279-640
               

               
Cow position:
               
chr10:20569211-20568853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 54
               

               
Conread position:
               
279-645
               

               
Cow position:
               
chr10:1088105-1087732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
133, 16
               

               
Conread position:
               
279-646
               

               
Cow position:
               
chr10:6489961-6489577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
50, 131
               

               
Conread position:
               
279-646
               

               
Cow position:
               
chr10:19895482-19895111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
279-646
               

               
Cow position:
               
chr10:22472414-22472027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
279-646
               

               
Cow position:
               
chr10:24745207-24744839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
49, 16
               

               
Conread position:
               
279-646
               

               
Cow position:
               
chr10:34661236-34661604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-646
               

               
Cow position:
               
chr10:46490973-46491318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
195, 68
               

               
Conread position:
               
279-646
               

               
Cow position:
               
chr10:69934691-69935066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
279-647
               

               
Cow position:
               
chr10:40107189-40106827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 25
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr10:1976228-1976611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr10:14817075-14817454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 109
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr10:17176122-17175742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr10:21422072-21422445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr10:29166362-29165988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr10:30522974-30523347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
49, 16
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr10:31534825-31534460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr10:31791170-31791551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
63, 55
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr10:36002287-36001915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr10:39228237-39227866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr10:41626682-41626318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr10:43487802-43487420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
27, 23
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr10:52046960-52046575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr10:52278814-52278430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
29, 23
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr10:53674915-53674532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr10:54848867-54848487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
49, 203
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr10:57059192-57059571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 26
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr10:62353549-62353175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
29, 127
               

               
Conread position:
               
279-649
               

               
Cow position:
               
chr10:15817705-15818088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-649
               

               
Cow position:
               
chr10:24022194-24022570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
80, 26
               

               
Conread position:
               
279-649
               

               
Cow position:
               
chr10:65133033-65132667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
50, 64
               

               
Conread position:
               
279-650
               

               
Cow position:
               
chr10:8093229-8093608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
29, 6
               

               
Conread position:
               
279-650
               

               
Cow position:
               
chr10:20897377-20897010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-656
               

               
Cow position:
               
chr10:14909653-14909275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 33
               

               
Conread position:
               
279-656
               

               
Cow position:
               
chr10:16432230-16432606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 74
               

               
Conread position:
               
279-656
               

               
Cow position:
               
chr10:25971181-25970835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
279-656
               

               
Cow position:
               
chr10:39314788-39314414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 76
               

               
Conread position:
               
279-657
               

               
Cow position:
               
chr10:10752978-10753353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
180, 65
               

               
Conread position:
               
279-659
               

               
Cow position:
               
chr10:15293355-15292970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
19, 27
               

               
Conread position:
               
279-663
               

               
Cow position:
               
chr10:21424590-21424990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 139
               

               
Conread position:
               
279-666
               

               
Cow position:
               
chr10:42312993-42312604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
49, 143
               

               
Conread position:
               
280-618
               

               
Cow position:
               
chr10:48257189-48257539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
26, 18
               

               
Conread position:
               
280-631
               

               
Cow position:
               
chr10:5543162-5543524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
26, 21
               

               
Conread position:
               
280-646
               

               
Cow position:
               
chr10:35731439-35731814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
280-648
               

               
Cow position:
               
chr10:49846863-49846485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 21
               

               
Conread position:
               
281-657
               

               
Cow position:
               
chr10:13586791-13586414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
25, 20
               

               
Conread position:
               
281-662
               

               
Cow position:
               
chr10:51778948-51779330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
283-640
               

               
Cow position:
               
chr10:53973927-53973566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
44, 155
               

               
Conread position:
               
284-591
               

               
Cow position:
               
chr10:38513259-38512941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
22, 17
               

               
Conread position:
               
285-646
               

               
Cow position:
               
chr10:22616557-22616932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
285-646
               

               
Cow position:
               
chr10:53247921-53248297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
285-648
               

               
Cow position:
               
chr10:16598933-16599322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
288-597
               

               
Cow position:
               
chr10:60722079-60722383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
288-659
               

               
Cow position:
               
chr10:25293867-25293494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 135
               

               
Conread position:
               
289-584
               

               
Cow position:
               
chr10:46492915-46493229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
289-609
               

               
Cow position:
               
chr10:35867939-35868252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
40, 117
               

               
Conread position:
               
292-415
               

               
Cow position:
               
chr10:42139680-42139802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
292-553
               

               
Cow position:
               
chr10:23135387-23135134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 104
               

               
Conread position:
               
293-648
               

               
Cow position:
               
chr10:1749660-1749286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
14, 8
               

               
Conread position:
               
293-661
               

               
Cow position:
               
chr10:53084245-53083862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
35, 96
               

               
Conread position:
               
294-553
               

               
Cow position:
               
chr10:50134729-50135002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 7
               

               
Conread position:
               
294-621
               

               
Cow position:
               
chr10:28105005-28105335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
12, 7
               

               
Conread position:
               
294-632
               

               
Cow position:
               
chr10:21657495-21657146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
14, 7
               

               
Conread position:
               
294-632
               

               
Cow position:
               
chr10:53934678-53935014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
12, 7
               

               
Conread position:
               
294-638
               

               
Cow position:
               
chr10:1488906-1488569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 7
               

               
Conread position:
               
294-643
               

               
Cow position:
               
chr10:8923354-8922984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 7
               

               
Conread position:
               
294-646
               

               
Cow position:
               
chr10:10720598-10720965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
12, 7
               

               
Conread position:
               
294-646
               

               
Cow position:
               
chr10:28670742-28671112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
14, 249
               

               
Conread position:
               
294-656
               

               
Cow position:
               
chr10:38014440-38014074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
34, 7
               

               
Conread position:
               
294-687
               

               
Cow position:
               
chr10:35902881-35903277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
15, 7
               

               
Conread position:
               
295-596
               

               
Cow position:
               
chr10:41060238-41060530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
66, 20
               

               
Conread position:
               
295-617
               

               
Cow position:
               
chr10:32066192-32065863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
23, 40
               

               
Conread position:
               
295-631
               

               
Cow position:
               
chr10:63276465-63276117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 9
               

               
Conread position:
               
295-648
               

               
Cow position:
               
chr10:13368425-13368060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 9
               

               
Conread position:
               
295-648
               

               
Cow position:
               
chr10:16598761-16598398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
33, 9
               

               
Conread position:
               
295-648
               

               
Cow position:
               
chr10:38944329-38943968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 9
               

               
Conread position:
               
295-656
               

               
Cow position:
               
chr10:1352005-1351636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
23, 93
               

               
Conread position:
               
296-473
               

               
Cow position:
               
chr10:17539466-17539298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
134, 60
               

               
Conread position:
               
296-632
               

               
Cow position:
               
chr10:48462270-48462616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
10, 39
               

               
Conread position:
               
297-430
               

               
Cow position:
               
chr10:20312948-20313080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
297-563
               

               
Cow position:
               
chr10:22977609-22977876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
185, 35
               

               
Conread position:
               
297-618
               

               
Cow position:
               
chr10:25257661-25257327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
21, 127
               

               
Conread position:
               
297-646
               

               
Cow position:
               
chr10:46468626-46468982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 27
               

               
Conread position:
               
298-617
               

               
Cow position:
               
chr10:24560916-24561246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
8, 117
               

               
Conread position:
               
298-632
               

               
Cow position:
               
chr10:2449422-2449077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
8, 127
               

               
Conread position:
               
298-645
               

               
Cow position:
               
chr10:35752891-35753248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
298-646
               

               
Cow position:
               
chr10:12392538-12392888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 24
               

               
Conread position:
               
299-585
               

               
Cow position:
               
chr10:8219355-8219057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
39, 35
               

               
Conread position:
               
299-619
               

               
Cow position:
               
chr10:46800950-46801265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 60
               

               
Conread position:
               
299-632
               

               
Cow position:
               
chr10:30460722-30460370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
36, 6
               

               
Conread position:
               
299-638
               

               
Cow position:
               
chr10:20553255-20552906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
7, 136
               

               
Conread position:
               
299-639
               

               
Cow position:
               
chr10:7328778-7328448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 5
               

               
Conread position:
               
299-644
               

               
Cow position:
               
chr10:38725725-38725373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
9, 104
               

               
Conread position:
               
299-644
               

               
Cow position:
               
chr10:57142145-57142506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 118
               

               
Conread position:
               
299-646
               

               
Cow position:
               
chr10:16093280-16092927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
9, 108
               

               
Conread position:
               
299-648
               

               
Cow position:
               
chr10:17073294-17073643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
9, 118
               

               
Conread position:
               
299-648
               

               
Cow position:
               
chr10:59839217-59839576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
7, 36
               

               
Conread position:
               
299-649
               

               
Cow position:
               
chr10:31362143-31362501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
9, 108
               

               
Conread position:
               
299-656
               

               
Cow position:
               
chr10:37235485-37235850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
8, 14
               

               
Conread position:
               
299-661
               

               
Cow position:
               
chr10:23936547-23936180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
9, 121
               

               
Conread position:
               
299-663
               

               
Cow position:
               
chr10:15318956-15318581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
7, 263
               

               
Conread position:
               
299-665
               

               
Cow position:
               
chr10:34174907-34175306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
299-692
               

               
Cow position:
               
chr10:37818486-37818898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
9, 109
               

               
Conread position:
               
300-622
               

               
Cow position:
               
chr10:58937224-58937551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
300-640
               

               
Cow position:
               
chr10:34660173-34660498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
6, 116
               

               
Conread position:
               
300-646
               

               
Cow position:
               
chr10:35862158-35862519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
6, 34
               

               
Conread position:
               
300-655
               

               
Cow position:
               
chr10:58259456-58259813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
35, 66
               

               
Conread position:
               
301-648
               

               
Cow position:
               
chr10:32775166-32774824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
60, 129
               

               
Conread position:
               
301-656
               

               
Cow position:
               
chr10:17844835-17844470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
5, 101
               

               
Conread position:
               
301-657
               

               
Cow position:
               
chr10:20478966-20478590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 133
               

               
Conread position:
               
303-638
               

               
Cow position:
               
chr10:24744611-24744277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 120
               

               
Conread position:
               
303-638
               

               
Cow position:
               
chr10:41637712-41637369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
43, 30
               

               
Conread position:
               
303-656
               

               
Cow position:
               
chr10:11275715-11275371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
15, 111
               

               
Conread position:
               
303-662
               

               
Cow position:
               
chr10:24077578-24077962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 126
               

               
Conread position:
               
304-650
               

               
Cow position:
               
chr10:55122871-55122501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 296
               

               
Conread position:
               
305-544
               

               
Cow position:
               
chr10:42892907-42893150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
23, 101
               

               
Conread position:
               
305-599
               

               
Cow position:
               
chr10:29588776-29589081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 103
               

               
Conread position:
               
305-619
               

               
Cow position:
               
chr10:39875090-39875406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
23, 103
               

               
Conread position:
               
305-627
               

               
Cow position:
               
chr10:58827244-58827575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
12, 125
               

               
Conread position:
               
305-642
               

               
Cow position:
               
chr10:17887905-17887556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
305-646
               

               
Cow position:
               
chr10:6505415-6505072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
23, 108
               

               
Conread position:
               
305-646
               

               
Cow position:
               
chr10:11966784-11967135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
23, 119
               

               
Conread position:
               
305-648
               

               
Cow position:
               
chr10:54469330-54469673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
23, 105
               

               
Conread position:
               
306-647
               

               
Cow position:
               
chr10:57404872-57405221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 106
               

               
Conread position:
               
306-648
               

               
Cow position:
               
chr10:59675192-59675543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
22, 103
               

               
Conread position:
               
307-648
               

               
Cow position:
               
chr10:31374025-31374397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 141
               

               
Conread position:
               
308-648
               

               
Cow position:
               
chr10:6914959-6915288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 47
               

               
Conread position:
               
308-712
               

               
Cow position:
               
chr10:30936955-30937346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
43, 58
               

               
Conread position:
               
309-640
               

               
Cow position:
               
chr10:41802840-41803178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
19, 80
               

               
Conread position:
               
309-651
               

               
Cow position:
               
chr10:6719951-6719609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
54, 18
               

               
Conread position:
               
310-637
               

               
Cow position:
               
chr10:38155513-38155177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 99
               

               
Conread position:
               
310-647
               

               
Cow position:
               
chr10:24548308-24547969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
310-656
               

               
Cow position:
               
chr10:30352907-30352545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 14
               

               
Conread position:
               
311-640
               

               
Cow position:
               
chr10:59588118-59588448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
17, 112
               

               
Conread position:
               
312-632
               

               
Cow position:
               
chr10:60358772-60358459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 30
               

               
Conread position:
               
313-644
               

               
Cow position:
               
chr10:22843740-22843396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
34, 93
               

               
Conread position:
               
314-648
               

               
Cow position:
               
chr10:24096318-24096670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
315-649
               

               
Cow position:
               
chr10:9675410-9675748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
316-636
               

               
Cow position:
               
chr10:58264530-58264837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
30, 100
               

               
Conread position:
               
316-638
               

               
Cow position:
               
chr10:59546221-59546532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
316-676
               

               
Cow position:
               
chr10:49772026-49771680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
37, 104
               

               
Conread position:
               
318-545
               

               
Cow position:
               
chr10:17698974-17699202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
138, 72
               

               
Conread position:
               
322-646
               

               
Cow position:
               
chr10:15462536-15462209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
42, 5
               

               
Conread position:
               
323-632
               

               
Cow position:
               
chr10:12919311-12919615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
12, 96
               

               
Conread position:
               
323-638
               

               
Cow position:
               
chr10:39468589-39468265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
13, 95
               

               
Conread position:
               
323-640
               

               
Cow position:
               
chr10:36957448-36957754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
66, 42
               

               
Conread position:
               
323-641
               

               
Cow position:
               
chr10:45770093-45769757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
5, 114
               

               
Conread position:
               
323-644
               

               
Cow position:
               
chr10:25957007-25956693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
218, 43
               

               
Conread position:
               
323-644
               

               
Cow position:
               
chr10:35013028-35012712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 34
               

               
Conread position:
               
324-595
               

               
Cow position:
               
chr10:57563926-57563647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 109
               

               
Conread position:
               
325-658
               

               
Cow position:
               
chr10:58399238-58399576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 112
               

               
Conread position:
               
326-629
               

               
Cow position:
               
chr10:58263053-58262763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
71, 78
               

               
Conread position:
               
326-648
               

               
Cow position:
               
chr10:52569633-52569304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
327-648
               

               
Cow position:
               
chr10:27716800-27717129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
327-648
               

               
Cow position:
               
chr10:35767049-35767369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
155, 38
               

               
Conread position:
               
327-656
               

               
Cow position:
               
chr10:67626955-67627284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
34, 99
               

               
Conread position:
               
334-626
               

               
Cow position:
               
chr10:22520128-22520434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
334-640
               

               
Cow position:
               
chr10:37287142-37287460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
65, 93
               

               
Conread position:
               
337-639
               

               
Cow position:
               
chr10:49569227-49568922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
339-545
               

               
Cow position:
               
chr10:25618534-25618333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
339-637
               

               
Cow position:
               
chr10:21037331-21037030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
155, 11
               

               
Conread position:
               
341-595
               

               
Cow position:
               
chr10:25882438-25882189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
114, 26
               

               
Conread position:
               
349-621
               

               
Cow position:
               
chr10:43250754-43251031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
43, 122
               

               
Conread position:
               
351-648
               

               
Cow position:
               
chr10:67717000-67716693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
60, 126
               

               
Conread position:
               
355-632
               

               
Cow position:
               
chr10:32093814-32093530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
113, 66
               

               
Conread position:
               
357-617
               

               
Cow position:
               
chr10:9445015-9445272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
116, 15
               

               
Conread position:
               
358-663
               

               
Cow position:
               
chr10:41255990-41255682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
91, 62
               

               
Conread position:
               
359-628
               

               
Cow position:
               
chr10:43508995-43508728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
125, 61
               

               
Conread position:
               
359-632
               

               
Cow position:
               
chr10:5607649-5607368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
110, 50
               

               
Conread position:
               
359-640
               

               
Cow position:
               
chr10:58718655-58718369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 46
               

               
Conread position:
               
359-641
               

               
Cow position:
               
chr10:49680042-49679761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
202, 50
               

               
Conread position:
               
359-642
               

               
Cow position:
               
chr10:56080167-56080458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 45
               

               
Conread position:
               
359-643
               

               
Cow position:
               
chr10:20399206-20398914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
50, 75
               

               
Conread position:
               
359-646
               

               
Cow position:
               
chr10:45113994-45113717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
359-647
               

               
Cow position:
               
chr10:20372120-20372421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
55, 50
               

               
Conread position:
               
359-648
               

               
Cow position:
               
chr10:47165874-47165587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
20, 53
               

               
Conread position:
               
359-649
               

               
Cow position:
               
chr10:19394585-19394870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
97, 73
               

               
Conread position:
               
359-653
               

               
Cow position:
               
chr10:68979581-68979280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 37
               

               
Conread position:
               
359-661
               

               
Cow position:
               
chr10:6173362-6173053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
97, 60
               

               
Conread position:
               
359-668
               

               
Cow position:
               
chr10:15294372-15294055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
103, 73
               

               
Conread position:
               
359-707
               

               
Cow position:
               
chr10:68204091-68204433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 43
               

               
Conread position:
               
360-640
               

               
Cow position:
               
chr10:37444214-37444499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 69
               

               
Conread position:
               
360-646
               

               
Cow position:
               
chr10:55580270-55580551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 64
               

               
Conread position:
               
360-647
               

               
Cow position:
               
chr10:34607565-34607268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 50
               

               
Conread position:
               
360-648
               

               
Cow position:
               
chr10:20095764-20095465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
53, 44
               

               
Conread position:
               
360-656
               

               
Cow position:
               
chr10:41941572-41941879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
124, 45
               

               
Conread position:
               
360-677
               

               
Cow position:
               
chr10:60032566-60032894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
103, 66
               

               
Conread position:
               
361-632
               

               
Cow position:
               
chr10:47493207-47493480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
184, 118
               

               
Conread position:
               
361-647
               

               
Cow position:
               
chr10:36231978-36231697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 57
               

               
Conread position:
               
363-656
               

               
Cow position:
               
chr10:22652701-22652395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
72, 47
               

               
Conread position:
               
363-656
               

               
Cow position:
               
chr10:57457336-57457033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
92, 42
               

               
Conread position:
               
366-656
               

               
Cow position:
               
chr10:21708904-21709191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
113, 61
               

               
Conread position:
               
367-610
               

               
Cow position:
               
chr10:25866143-25865887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
94, 28
               

               
Conread position:
               
368-632
               

               
Cow position:
               
chr10:1055912-1056186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
89, 21
               

               
Conread position:
               
369-656
               

               
Cow position:
               
chr10:34554097-34554387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
27, 35
               

               
Conread position:
               
370-660
               

               
Cow position:
               
chr10:7366790-7367085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
371-639
               

               
Cow position:
               
chr10:24755433-24755707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
374-616
               

               
Cow position:
               
chr10:20517261-20517005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
376-682
               

               
Cow position:
               
chr10:53057681-53057984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 61
               

               
Conread position:
               
380-615
               

               
Cow position:
               
chr10:11060184-11059944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
79, 48
               

               
Conread position:
               
383-656
               

               
Cow position:
               
chr10:65130677-65130961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
390-621
               

               
Cow position:
               
chr10:69558899-69558664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 42
               

               
Conread position:
               
390-638
               

               
Cow position:
               
chr10:3180647-3180900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
390-659
               

               
Cow position:
               
chr10:15618835-15619109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
78, 35
               

               
Conread position:
               
391-601
               

               
Cow position:
               
chr10:30497603-30497397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
30, 36
               

               
Conread position:
               
393-645
               

               
Cow position:
               
chr10:40646497-40646256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
77, 8
               

               
Conread position:
               
394-661
               

               
Cow position:
               
chr10:20505512-20505238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
18, 216
               

               
Conread position:
               
395-609
               

               
Cow position:
               
chr10:25354238-25354028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
66, 37
               

               
Conread position:
               
405-648
               

               
Cow position:
               
chr10:32503413-32503160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
405-650
               

               
Cow position:
               
chr10:1719566-1719822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
408-647
               

               
Cow position:
               
chr10:61600281-61600506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
7, 31
               

               
Conread position:
               
409-656
               

               
Cow position:
               
chr10:24871846-24871589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
412-656
               

               
Cow position:
               
chr10:48388315-48388578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
43, 69
               

               
Conread position:
               
414-631
               

               
Cow position:
               
chr10:25045734-25045956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
414-648
               

               
Cow position:
               
chr10:64182404-64182160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
54, 11
               

               
Conread position:
               
417-640
               

               
Cow position:
               
chr10:2394517-2394745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
417-646
               

               
Cow position:
               
chr10:61588310-61588550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
44, 135
               

               
Conread position:
               
418-648
               

               
Cow position:
               
chr10:58235207-58234979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 66
               

               
Conread position:
               
418-650
               

               
Cow position:
               
chr10:31266382-31266616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
66, 108
               

               
Conread position:
               
419-626
               

               
Cow position:
               
chr10:734543-734751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
16, 43
               

               
Conread position:
               
419-644
               

               
Cow position:
               
chr10:29070113-29069869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
420-648
               

               
Cow position:
               
chr10:2292777-2293013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
420-672
               

               
Cow position:
               
chr10:68251519-68251263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 90
               

               
Conread position:
               
421-645
               

               
Cow position:
               
chr10:19159652-19159882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
53, 7
               

               
Conread position:
               
421-659
               

               
Cow position:
               
chr10:14975848-14976093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
423-618
               

               
Cow position:
               
chr10:48223850-48224039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
424-713
               

               
Cow position:
               
chr10:47976821-47976531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
50, 11
               

               
Conread position:
               
425-646
               

               
Cow position:
               
chr10:5113520-5113301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
425-653
               

               
Cow position:
               
chr10:6986389-6986157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 113
               

               
Conread position:
               
426-620
               

               
Cow position:
               
chr10:28382797-28382990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
119, 6
               

               
Conread position:
               
426-661
               

               
Cow position:
               
chr10:33867448-33867682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 13
               

               
Conread position:
               
428-682
               

               
Cow position:
               
chr10:28933683-28933418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
429-673
               

               
Cow position:
               
chr10:11213052-11212797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
21, 217
               

               
Conread position:
               
433-647
               

               
Cow position:
               
chr10:77319-77100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
434-638
               

               
Cow position:
               
chr10:35901258-35901055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 41
               

               
Conread position:
               
434-655
               

               
Cow position:
               
chr10:49923421-49923651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
39, 189
               

               
Conread position:
               
435-629
               

               
Cow position:
               
chr10:19655838-19655637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
435-638
               

               
Cow position:
               
chr10:1004591-1004378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
435-645
               

               
Cow position:
               
chr10:30914422-30914209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
17, 69
               

               
Conread position:
               
440-648
               

               
Cow position:
               
chr10:1978740-1978954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
440-648
               

               
Cow position:
               
chr10:57033861-57034081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
440-649
               

               
Cow position:
               
chr10:8934407-8934195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
441-638
               

               
Cow position:
               
chr10:64300435-64300638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
55, 6
               

               
Conread position:
               
446-648
               

               
Cow position:
               
chr10:15889401-15889199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
448-648
               

               
Cow position:
               
chr10:63955707-63955505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
448-656
               

               
Cow position:
               
chr10:15498744-15498961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
48, 8
               

               
Conread position:
               
451-648
               

               
Cow position:
               
chr10:33423242-33423431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
453-648
               

               
Cow position:
               
chr10:69033629-69033822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
455-621
               

               
Cow position:
               
chr10:5502934-5502761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
455-632
               

               
Cow position:
               
chr10:4994657-4994830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
455-632
               

               
Cow position:
               
chr10:37528697-37528880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 92
               

               
Conread position:
               
455-642
               

               
Cow position:
               
chr10:29628042-29628235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
455-644
               

               
Cow position:
               
chr10:51696650-51696466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
455-646
               

               
Cow position:
               
chr10:16986147-16985950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
455-646
               

               
Cow position:
               
chr10:29360814-29360619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 62
               

               
Conread position:
               
455-647
               

               
Cow position:
               
chr10:20735609-20735417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
455-648
               

               
Cow position:
               
chr10:25509601-25509408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
86, 16
               

               
Conread position:
               
455-648
               

               
Cow position:
               
chr10:29188450-29188651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
455-648
               

               
Cow position:
               
chr10:29211868-29211667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
455-648
               

               
Cow position:
               
chr10:31466654-31466453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
455-648
               

               
Cow position:
               
chr10:32174639-32174448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
23, 135
               

               
Conread position:
               
455-648
               

               
Cow position:
               
chr10:50390686-50390492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
455-649
               

               
Cow position:
               
chr10:35026386-35026188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
455-649
               

               
Cow position:
               
chr10:45337568-45337375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 111
               

               
Conread position:
               
455-656
               

               
Cow position:
               
chr10:48259323-48259529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 120
               

               
Conread position:
               
455-656
               

               
Cow position:
               
chr10:55097781-55097980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
26, 48
               

               
Conread position:
               
455-662
               

               
Cow position:
               
chr10:65734852-65734643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
87, 10
               

               
Conread position:
               
455-671
               

               
Cow position:
               
chr10:35857147-35857369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
459-611
               

               
Cow position:
               
chr10:8682974-8683127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
459-644
               

               
Cow position:
               
chr10:69250428-69250242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
14, 64
               

               
Conread position:
               
459-647
               

               
Cow position:
               
chr10:55733696-55733889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
459-650
               

               
Cow position:
               
chr10:62316475-62316275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
459-656
               

               
Cow position:
               
chr10:41151715-41151518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 69
               

               
Conread position:
               
463-580
               

               
Cow position:
               
chr10:25445568-25445448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
464-656
               

               
Cow position:
               
chr10:57958396-57958591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
73, 153
               

               
Conread position:
               
465-632
               

               
Cow position:
               
chr10:43771512-43771351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
466-616
               

               
Cow position:
               
chr10:58601578-58601429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
467-625
               

               
Cow position:
               
chr10:35715816-35715978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
467-631
               

               
Cow position:
               
chr10:53846145-53846310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
467-646
               

               
Cow position:
               
chr10:14188925-14189100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 56
               

               
Conread position:
               
467-648
               

               
Cow position:
               
chr10:26731752-26731940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
467-656
               

               
Cow position:
               
chr10:42459440-42459635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
468-632
               

               
Cow position:
               
chr10:67050627-67050462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
468-637
               

               
Cow position:
               
chr10:41916785-41916954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 153
               

               
Conread position:
               
468-642
               

               
Cow position:
               
chr10:42387262-42387431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
154, 13
               

               
Conread position:
               
468-656
               

               
Cow position:
               
chr10:26672979-26672798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
468-661
               

               
Cow position:
               
chr10:4167958-4167758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
469-646
               

               
Cow position:
               
chr10:47583903-47583722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
78, 126
               

               
Conread position:
               
469-648
               

               
Cow position:
               
chr10:4879720-4879551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
469-666
               

               
Cow position:
               
chr10:23872575-23872766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
148, 12
               

               
Conread position:
               
471-631
               

               
Cow position:
               
chr10:28734798-28734964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 54
               

               
Conread position:
               
471-645
               

               
Cow position:
               
chr10:6252584-6252772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 119
               

               
Conread position:
               
471-646
               

               
Cow position:
               
chr10:28836111-28835942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
12, 58
               

               
Conread position:
               
471-646
               

               
Cow position:
               
chr10:33067283-33067452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 60
               

               
Conread position:
               
471-648
               

               
Cow position:
               
chr10:4711522-4711339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
471-648
               

               
Cow position:
               
chr10:16623246-16623427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
70, 39
               

               
Conread position:
               
471-648
               

               
Cow position:
               
chr10:69698873-69698693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 99
               

               
Conread position:
               
471-677
               

               
Cow position:
               
chr10:28450823-28451037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
472-629
               

               
Cow position:
               
chr10:15286928-15286766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 117
               

               
Conread position:
               
472-631
               

               
Cow position:
               
chr10:18845046-18845209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
473-617
               

               
Cow position:
               
chr10:13589850-13589703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 9
               

               
Conread position:
               
473-645
               

               
Cow position:
               
chr10:4502542-4502368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
473-646
               

               
Cow position:
               
chr10:42232922-42232751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 77
               

               
Conread position:
               
473-682
               

               
Cow position:
               
chr10:29291103-29290894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 17
               

               
Conread position:
               
474-639
               

               
Cow position:
               
chr10:47489946-47490110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
138, 7
               

               
Conread position:
               
474-646
               

               
Cow position:
               
chr10:64878111-64878283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
149, 161
               

               
Conread position:
               
475-644
               

               
Cow position:
               
chr10:50141315-50141482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
147, 27
               

               
Conread position:
               
475-686
               

               
Cow position:
               
chr10:28509036-28509250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 18
               

               
Conread position:
               
476-656
               

               
Cow position:
               
chr10:39245026-39245207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
139, 25
               

               
Conread position:
               
478-646
               

               
Cow position:
               
chr10:239639-239811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 109
               

               
Conread position:
               
479-648
               

               
Cow position:
               
chr10:8475742-8475571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
479-649
               

               
Cow position:
               
chr10:20543404-20543239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 46
               

               
Conread position:
               
480-607
               

               
Cow position:
               
chr10:48980354-48980482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
480-639
               

               
Cow position:
               
chr10:57736283-57736446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 44
               

               
Conread position:
               
480-650
               

               
Cow position:
               
chr10:30746279-30746111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
134, 88
               

               
Conread position:
               
480-661
               

               
Cow position:
               
chr10:9798319-9798500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
142, 69
               

               
Conread position:
               
481-633
               

               
Cow position:
               
chr10:48377763-48377922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
481-646
               

               
Cow position:
               
chr10:6345955-6345783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
481-647
               

               
Cow position:
               
chr10:10046175-10046338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
42, 68
               

               
Conread position:
               
481-648
               

               
Cow position:
               
chr10:20446972-20446809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
141, 68
               

               
Conread position:
               
481-648
               

               
Cow position:
               
chr10:35904946-35905121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
481-648
               

               
Cow position:
               
chr10:39123820-39123992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
481-648
               

               
Cow position:
               
chr10:40933558-40933386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
481-648
               

               
Cow position:
               
chr10:47158983-47158815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
133, 20
               

               
Conread position:
               
481-648
               

               
Cow position:
               
chr10:52152400-52152232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
481-649
               

               
Cow position:
               
chr10:11217492-11217321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
481-649
               

               
Cow position:
               
chr10:39774149-39774322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
481-656
               

               
Cow position:
               
chr10:61305159-61304983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 133
               

               
Conread position:
               
481-659
               

               
Cow position:
               
chr10:42230538-42230365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
87, 65
               

               
Conread position:
               
481-661
               

               
Cow position:
               
chr10:39646225-39646410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
481-704
               

               
Cow position:
               
chr10:5264576-5264352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
171, 40
               

               
Conread position:
               
482-629
               

               
Cow position:
               
chr10:889412-889565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
482-648
               

               
Cow position:
               
chr10:19678748-19678577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
482-648
               

               
Cow position:
               
chr10:28569947-28569776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
482-661
               

               
Cow position:
               
chr10:28527224-28527406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
482-682
               

               
Cow position:
               
chr10:41397355-41397156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
140, 34
               

               
Conread position:
               
482-713
               

               
Cow position:
               
chr10:23738868-23739106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
69, 154
               

               
Conread position:
               
483-618
               

               
Cow position:
               
chr10:44854969-44854830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
483-677
               

               
Cow position:
               
chr10:8206767-8206951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
484-650
               

               
Cow position:
               
chr10:613340-613512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
485-624
               

               
Cow position:
               
chr10:43061186-43061330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
485-630
               

               
Cow position:
               
chr10:54811328-54811179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
485-648
               

               
Cow position:
               
chr10:22786773-22786610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
138, 129
               

               
Conread position:
               
485-660
               

               
Cow position:
               
chr10:47617571-47617753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
486-592
               

               
Cow position:
               
chr10:2733146-2733252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
79, 50
               

               
Conread position:
               
486-601
               

               
Cow position:
               
chr10:14650341-14650456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
486-608
               

               
Cow position:
               
chr10:11609482-11609357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
486-619
               

               
Cow position:
               
chr10:38370586-38370723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
486-629
               

               
Cow position:
               
chr10:23376590-23376735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
486-638
               

               
Cow position:
               
chr10:15868109-15867955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
486-638
               

               
Cow position:
               
chr10:53336534-53336684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
486-638
               

               
Cow position:
               
chr10:69998072-69998228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
486-644
               

               
Cow position:
               
chr10:40543146-40543308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
486-646
               

               
Cow position:
               
chr10:12875909-12876073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
50, 132
               

               
Conread position:
               
486-646
               

               
Cow position:
               
chr10:19402808-19402647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
486-646
               

               
Cow position:
               
chr10:20812051-20811886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
486-646
               

               
Cow position:
               
chr10:34300379-34300216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
486-646
               

               
Cow position:
               
chr10:58066260-58066423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
486-648
               

               
Cow position:
               
chr10:56095099-56094938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
135, 44
               

               
Conread position:
               
486-649
               

               
Cow position:
               
chr10:27362361-27362202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
136, 15
               

               
Conread position:
               
486-650
               

               
Cow position:
               
chr10:26608012-26608181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
486-680
               

               
Cow position:
               
chr10:8923811-8923609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
60, 91
               

               
Conread position:
               
487-612
               

               
Cow position:
               
chr10:49058405-49058276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
487-617
               

               
Cow position:
               
chr10:12100972-12101101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
487-627
               

               
Cow position:
               
chr10:60358113-60357976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
129, 8
               

               
Conread position:
               
487-650
               

               
Cow position:
               
chr10:38781743-38781904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
131, 94
               

               
Conread position:
               
487-661
               

               
Cow position:
               
chr10:27119316-27119499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 96
               

               
Conread position:
               
488-647
               

               
Cow position:
               
chr10:16830554-16830717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
72, 61
               

               
Conread position:
               
488-661
               

               
Cow position:
               
chr10:59675736-59675910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
489-637
               

               
Cow position:
               
chr10:38528391-38528248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
80, 35
               

               
Conread position:
               
489-645
               

               
Cow position:
               
chr10:1328293-1328453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
52, 97
               

               
Conread position:
               
489-646
               

               
Cow position:
               
chr10:27133153-27133311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
489-656
               

               
Cow position:
               
chr10:17806195-17806028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
16, 133
               

               
Conread position:
               
490-621
               

               
Cow position:
               
chr10:44771524-44771393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
490-622
               

               
Cow position:
               
chr10:58074774-58074910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
490-632
               

               
Cow position:
               
chr10:14019749-14019896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
490-632
               

               
Cow position:
               
chr10:28194420-28194565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 5
               

               
Conread position:
               
490-632
               

               
Cow position:
               
chr10:66026802-66026946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 114
               

               
Conread position:
               
490-641
               

               
Cow position:
               
chr10:28448930-28448778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
60, 136
               

               
Conread position:
               
490-645
               

               
Cow position:
               
chr10:18866279-18866435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
52, 22
               

               
Conread position:
               
490-645
               

               
Cow position:
               
chr10:35887541-35887690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
490-646
               

               
Cow position:
               
chr10:17437194-17437041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
130, 76
               

               
Conread position:
               
490-646
               

               
Cow position:
               
chr10:54141756-54141597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 79
               

               
Conread position:
               
490-648
               

               
Cow position:
               
chr10:7299011-7299175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
490-648
               

               
Cow position:
               
chr10:11317900-11317740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
490-660
               

               
Cow position:
               
chr10:69941887-69942059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
33, 108
               

               
Conread position:
               
490-661
               

               
Cow position:
               
chr10:33220342-33220514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 66
               

               
Conread position:
               
491-631
               

               
Cow position:
               
chr10:54206571-54206432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
131, 51
               

               
Conread position:
               
491-646
               

               
Cow position:
               
chr10:3984259-3984103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
491-646
               

               
Cow position:
               
chr10:39939564-39939718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
131, 51
               

               
Conread position:
               
491-647
               

               
Cow position:
               
chr10:9526208-9526367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
492-632
               

               
Cow position:
               
chr10:51714983-51714841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
493-632
               

               
Cow position:
               
chr10:24153133-24153273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
493-648
               

               
Cow position:
               
chr10:19094512-19094357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
129, 76
               

               
Conread position:
               
493-648
               

               
Cow position:
               
chr10:64961171-64961010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
494-646
               

               
Cow position:
               
chr10:1184983-1185140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
494-648
               

               
Cow position:
               
chr10:25259894-25259738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
494-658
               

               
Cow position:
               
chr10:28007222-28007385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 116
               

               
Conread position:
               
494-660
               

               
Cow position:
               
chr10:49169189-49169357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
47, 143
               

               
Conread position:
               
494-700
               

               
Cow position:
               
chr10:65803225-65803423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
52, 31
               

               
Conread position:
               
495-634
               

               
Cow position:
               
chr10:43288009-43288145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
127, 28
               

               
Conread position:
               
495-638
               

               
Cow position:
               
chr10:43285465-43285608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 117
               

               
Conread position:
               
495-639
               

               
Cow position:
               
chr10:65748815-65748676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
128, 35
               

               
Conread position:
               
495-640
               

               
Cow position:
               
chr10:31005183-31005325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
128, 41
               

               
Conread position:
               
495-640
               

               
Cow position:
               
chr10:54799480-54799335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
127, 24
               

               
Conread position:
               
495-641
               

               
Cow position:
               
chr10:5889906-5890054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
495-645
               

               
Cow position:
               
chr10:29798208-29798055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
47, 118
               

               
Conread position:
               
495-645
               

               
Cow position:
               
chr10:63091180-63091025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
495-646
               

               
Cow position:
               
chr10:6516319-6516475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
495-646
               

               
Cow position:
               
chr10:41737169-41737020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
495-646
               

               
Cow position:
               
chr10:57773587-57773441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
495-648
               

               
Cow position:
               
chr10:19104309-19104473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
495-648
               

               
Cow position:
               
chr10:20294799-20294957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
495-648
               

               
Cow position:
               
chr10:27749541-27749384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
495-648
               

               
Cow position:
               
chr10:33163576-33163419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
495-648
               

               
Cow position:
               
chr10:61434849-61434698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
127, 103
               

               
Conread position:
               
495-656
               

               
Cow position:
               
chr10:5886756-5886593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
125, 141
               

               
Conread position:
               
495-656
               

               
Cow position:
               
chr10:40567823-40567666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
126, 18
               

               
Conread position:
               
495-661
               

               
Cow position:
               
chr10:58935330-58935493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
128, 77
               

               
Conread position:
               
495-682
               

               
Cow position:
               
chr10:65553196-65553007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 162
               

               
Conread position:
               
496-632
               

               
Cow position:
               
chr10:43451053-43451194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
496-637
               

               
Cow position:
               
chr10:38942290-38942146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
45, 67
               

               
Conread position:
               
496-637
               

               
Cow position:
               
chr10:44817645-44817503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
496-640
               

               
Cow position:
               
chr10:35452546-35452401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
496-641
               

               
Cow position:
               
chr10:54936250-54936396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
496-646
               

               
Cow position:
               
chr10:2419877-2420020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
126, 32
               

               
Conread position:
               
496-647
               

               
Cow position:
               
chr10:39438452-39438609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
46, 83
               

               
Conread position:
               
496-647
               

               
Cow position:
               
chr10:46829735-46829585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
126, 52
               

               
Conread position:
               
496-648
               

               
Cow position:
               
chr10:35820750-35820904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
39, 122
               

               
Conread position:
               
496-648
               

               
Cow position:
               
chr10:37907969-37908122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
496-649
               

               
Cow position:
               
chr10:10699648-10699802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
496-649
               

               
Cow position:
               
chr10:56835143-56834987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
496-652
               

               
Cow position:
               
chr10:51306192-51306032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
496-653
               

               
Cow position:
               
chr10:16740195-16740351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
496-661
               

               
Cow position:
               
chr10:5745097-5745267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
496-666
               

               
Cow position:
               
chr10:16587431-16587262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
497-631
               

               
Cow position:
               
chr10:19597301-19597438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
497-656
               

               
Cow position:
               
chr10:38948457-38948609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
498-647
               

               
Cow position:
               
chr10:29816453-29816298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
498-648
               

               
Cow position:
               
chr10:44681377-44681226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
120, 38
               

               
Conread position:
               
498-666
               

               
Cow position:
               
chr10:19056946-19057125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
499-646
               

               
Cow position:
               
chr10:19503619-19503762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
123, 41
               

               
Conread position:
               
500-641
               

               
Cow position:
               
chr10:8729274-8729128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
500-660
               

               
Cow position:
               
chr10:61304837-61304678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
501-632
               

               
Cow position:
               
chr10:42123960-42124088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
122, 45
               

               
Conread position:
               
502-644
               

               
Cow position:
               
chr10:17983039-17982902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
503-648
               

               
Cow position:
               
chr10:34906564-34906418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
503-660
               

               
Cow position:
               
chr10:29010159-29010313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
505-648
               

               
Cow position:
               
chr10:33573345-33573494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
506-646
               

               
Cow position:
               
chr10:60932204-60932059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
42, 88
               

               
Conread position:
               
508-656
               

               
Cow position:
               
chr10:48369754-48369909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
513-645
               

               
Cow position:
               
chr10:46377918-46378049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
98, 55
               

               
Conread position:
               
517-659
               

               
Cow position:
               
chr10:60237275-60237415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
529-640
               

               
Cow position:
               
chr10:24497073-24497184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
536-661
               

               
Cow position:
               
chr10:11059618-11059493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
537-632
               

               
Cow position:
               
chr10:23134923-23134827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               
Show alignments to all cow chromosomes.