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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8025P15.3
        

               
Conread position:
               
171-366
               

               
Cow position:
               
chr3:7365483-7365669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 13
               

               
Conread position:
               
190-352
               

               
Cow position:
               
chr3:61914168-61914008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
193-393
               

               
Cow position:
               
chr3:34315650-34315847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
190, 24
               

               
Conread position:
               
193-463
               

               
Cow position:
               
chr3:48271499-48271237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
31, 22
               

               
Conread position:
               
193-494
               

               
Cow position:
               
chr3:15221343-15221648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 27
               

               
Conread position:
               
193-501
               

               
Cow position:
               
chr3:20993988-20993679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
193-632
               

               
Cow position:
               
chr3:15051759-15052211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
84, 11
               

               
Conread position:
               
193-638
               

               
Cow position:
               
chr3:45648298-45647857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 34
               

               
Conread position:
               
197-631
               

               
Cow position:
               
chr3:525516-525081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
65, 53
               

               
Conread position:
               
197-646
               

               
Cow position:
               
chr3:54435158-54434686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 194
               

               
Conread position:
               
198-621
               

               
Cow position:
               
chr3:59474310-59473850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 229
               

               
Conread position:
               
199-646
               

               
Cow position:
               
chr3:48371313-48370843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
82, 18
               

               
Conread position:
               
199-659
               

               
Cow position:
               
chr3:42480783-42480323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 98
               

               
Conread position:
               
200-346
               

               
Cow position:
               
chr3:18865868-18866011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
200-418
               

               
Cow position:
               
chr3:891432-891215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
200-459
               

               
Cow position:
               
chr3:26088829-26089094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 17
               

               
Conread position:
               
200-632
               

               
Cow position:
               
chr3:37485631-37486057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
18, 47
               

               
Conread position:
               
200-639
               

               
Cow position:
               
chr3:26493071-26493505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 15
               

               
Conread position:
               
201-547
               

               
Cow position:
               
chr3:34669577-34669916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
105, 52
               

               
Conread position:
               
201-548
               

               
Cow position:
               
chr3:61323004-61322659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 47
               

               
Conread position:
               
201-648
               

               
Cow position:
               
chr3:20471200-20471646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 21
               

               
Conread position:
               
201-656
               

               
Cow position:
               
chr3:23471277-23471766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 261
               

               
Conread position:
               
202-419
               

               
Cow position:
               
chr3:30839408-30839194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
81, 58
               

               
Conread position:
               
202-613
               

               
Cow position:
               
chr3:18725477-18725888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
202-639
               

               
Cow position:
               
chr3:4050361-4049932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
64, 23
               

               
Conread position:
               
202-642
               

               
Cow position:
               
chr3:24353025-24352597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
125, 71
               

               
Conread position:
               
202-652
               

               
Cow position:
               
chr3:54739715-54740165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
202-657
               

               
Cow position:
               
chr3:67744456-67744927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 40
               

               
Conread position:
               
202-660
               

               
Cow position:
               
chr3:58131157-58130698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 116
               

               
Conread position:
               
202-685
               

               
Cow position:
               
chr3:74611730-74611240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 232
               

               
Conread position:
               
203-449
               

               
Cow position:
               
chr3:41550210-41550458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 101
               

               
Conread position:
               
203-632
               

               
Cow position:
               
chr3:68342095-68342528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 94
               

               
Conread position:
               
203-646
               

               
Cow position:
               
chr3:54340257-54340704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 219
               

               
Conread position:
               
203-656
               

               
Cow position:
               
chr3:55373401-55373888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 234
               

               
Conread position:
               
204-361
               

               
Cow position:
               
chr3:40100546-40100711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 102
               

               
Conread position:
               
204-363
               

               
Cow position:
               
chr3:26740876-26741027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 40
               

               
Conread position:
               
204-367
               

               
Cow position:
               
chr3:84112417-84112580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
60, 14
               

               
Conread position:
               
204-406
               

               
Cow position:
               
chr3:25076002-25076209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
204-408
               

               
Cow position:
               
chr3:24300530-24300317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
43, 203
               

               
Conread position:
               
204-419
               

               
Cow position:
               
chr3:17633881-17634098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
73, 61
               

               
Conread position:
               
204-422
               

               
Cow position:
               
chr3:51780832-51781050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
204-435
               

               
Cow position:
               
chr3:63449166-63448942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 98
               

               
Conread position:
               
204-457
               

               
Cow position:
               
chr3:11309976-11310231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
204-473
               

               
Cow position:
               
chr3:64319348-64319084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
80, 50
               

               
Conread position:
               
204-482
               

               
Cow position:
               
chr3:9630045-9629770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 107
               

               
Conread position:
               
204-521
               

               
Cow position:
               
chr3:58764903-58765239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
69, 103
               

               
Conread position:
               
204-544
               

               
Cow position:
               
chr3:57634429-57634088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
71, 96
               

               
Conread position:
               
204-616
               

               
Cow position:
               
chr3:13577036-13577443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
81, 99
               

               
Conread position:
               
204-617
               

               
Cow position:
               
chr3:54881939-54881498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 244
               

               
Conread position:
               
204-631
               

               
Cow position:
               
chr3:6873088-6873518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
48, 37
               

               
Conread position:
               
204-632
               

               
Cow position:
               
chr3:73764032-73764467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 98
               

               
Conread position:
               
204-640
               

               
Cow position:
               
chr3:5419704-5420148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 38
               

               
Conread position:
               
204-642
               

               
Cow position:
               
chr3:69750552-69750985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
79, 63
               

               
Conread position:
               
204-646
               

               
Cow position:
               
chr3:27532497-27532950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 34
               

               
Conread position:
               
204-646
               

               
Cow position:
               
chr3:71247196-71246749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
41, 55
               

               
Conread position:
               
204-648
               

               
Cow position:
               
chr3:3985499-3985040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
72, 175
               

               
Conread position:
               
204-656
               

               
Cow position:
               
chr3:56637816-56637368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 102
               

               
Conread position:
               
204-659
               

               
Cow position:
               
chr3:82074899-82075349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
76, 102
               

               
Conread position:
               
204-661
               

               
Cow position:
               
chr3:23091814-23092287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 107
               

               
Conread position:
               
204-662
               

               
Cow position:
               
chr3:62291962-62292420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 152
               

               
Conread position:
               
204-671
               

               
Cow position:
               
chr3:73467809-73467305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
38, 298
               

               
Conread position:
               
204-686
               

               
Cow position:
               
chr3:64172605-64172120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 98
               

               
Conread position:
               
204-697
               

               
Cow position:
               
chr3:64280755-64281274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
71, 231
               

               
Conread position:
               
205-363
               

               
Cow position:
               
chr3:43591058-43590896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
205-367
               

               
Cow position:
               
chr3:76913178-76913015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
105, 146
               

               
Conread position:
               
205-445
               

               
Cow position:
               
chr3:3036759-3037005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
71, 235
               

               
Conread position:
               
205-538
               

               
Cow position:
               
chr3:11919875-11920210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 62
               

               
Conread position:
               
205-559
               

               
Cow position:
               
chr3:74205645-74206010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 231
               

               
Conread position:
               
205-581
               

               
Cow position:
               
chr3:2199046-2198660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 119
               

               
Conread position:
               
205-598
               

               
Cow position:
               
chr3:22232486-22232882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
64, 36
               

               
Conread position:
               
205-628
               

               
Cow position:
               
chr3:15654988-15655421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
205-632
               

               
Cow position:
               
chr3:41718553-41718117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 44
               

               
Conread position:
               
205-645
               

               
Cow position:
               
chr3:36100993-36100541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 40
               

               
Conread position:
               
205-645
               

               
Cow position:
               
chr3:58175063-58174624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 93
               

               
Conread position:
               
205-646
               

               
Cow position:
               
chr3:26904281-26903827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 230
               

               
Conread position:
               
205-646
               

               
Cow position:
               
chr3:37186990-37186548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 209
               

               
Conread position:
               
205-646
               

               
Cow position:
               
chr3:51146515-51146954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 34
               

               
Conread position:
               
205-648
               

               
Cow position:
               
chr3:83491262-83490786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
74, 232
               

               
Conread position:
               
205-674
               

               
Cow position:
               
chr3:15057460-15057913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
85, 71
               

               
Conread position:
               
206-347
               

               
Cow position:
               
chr3:60145377-60145236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
78, 96
               

               
Conread position:
               
206-480
               

               
Cow position:
               
chr3:51492946-51492670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
78, 89
               

               
Conread position:
               
206-642
               

               
Cow position:
               
chr3:64536408-64536826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 17
               

               
Conread position:
               
206-644
               

               
Cow position:
               
chr3:65771174-65771600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 73
               

               
Conread position:
               
206-646
               

               
Cow position:
               
chr3:29887259-29887712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
206-650
               

               
Cow position:
               
chr3:53588226-53588682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 25
               

               
Conread position:
               
206-651
               

               
Cow position:
               
chr3:68707841-68708294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
69, 170
               

               
Conread position:
               
206-651
               

               
Cow position:
               
chr3:70896220-70895753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
46, 51
               

               
Conread position:
               
206-656
               

               
Cow position:
               
chr3:9641736-9641266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 101
               

               
Conread position:
               
206-660
               

               
Cow position:
               
chr3:68880950-68881411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
69, 169
               

               
Conread position:
               
207-377
               

               
Cow position:
               
chr3:31247823-31247654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
207-385
               

               
Cow position:
               
chr3:75142427-75142598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
207-388
               

               
Cow position:
               
chr3:43653956-43654134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
51, 104
               

               
Conread position:
               
207-424
               

               
Cow position:
               
chr3:77297156-77297368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
168, 134
               

               
Conread position:
               
207-545
               

               
Cow position:
               
chr3:50281591-50281944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 46
               

               
Conread position:
               
207-611
               

               
Cow position:
               
chr3:18216615-18217017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 30
               

               
Conread position:
               
207-617
               

               
Cow position:
               
chr3:20092364-20092763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 208
               

               
Conread position:
               
207-632
               

               
Cow position:
               
chr3:5374489-5374061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
69, 39
               

               
Conread position:
               
207-638
               

               
Cow position:
               
chr3:65058879-65058422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 238
               

               
Conread position:
               
207-648
               

               
Cow position:
               
chr3:5365845-5365396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
66, 223
               

               
Conread position:
               
207-661
               

               
Cow position:
               
chr3:48629432-48629889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
208-363
               

               
Cow position:
               
chr3:8746074-8746227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
208-372
               

               
Cow position:
               
chr3:62628106-62628268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
76, 41
               

               
Conread position:
               
208-387
               

               
Cow position:
               
chr3:25027561-25027383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
43, 34
               

               
Conread position:
               
208-425
               

               
Cow position:
               
chr3:5601008-5601228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
120, 41
               

               
Conread position:
               
208-434
               

               
Cow position:
               
chr3:64484409-64484174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
208-480
               

               
Cow position:
               
chr3:61116692-61116968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
208-505
               

               
Cow position:
               
chr3:20158549-20158264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
149, 72
               

               
Conread position:
               
208-567
               

               
Cow position:
               
chr3:70354077-70354447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 111
               

               
Conread position:
               
208-579
               

               
Cow position:
               
chr3:63039259-63038916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
76, 41
               

               
Conread position:
               
208-600
               

               
Cow position:
               
chr3:55991709-55992112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 42
               

               
Conread position:
               
208-615
               

               
Cow position:
               
chr3:9074185-9074579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 215
               

               
Conread position:
               
208-615
               

               
Cow position:
               
chr3:18687080-18686660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
67, 107
               

               
Conread position:
               
208-628
               

               
Cow position:
               
chr3:8924201-8923775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 109
               

               
Conread position:
               
208-630
               

               
Cow position:
               
chr3:70900053-70899628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
208-638
               

               
Cow position:
               
chr3:26066166-26065721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
41, 69
               

               
Conread position:
               
208-639
               

               
Cow position:
               
chr3:16343770-16343335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 58
               

               
Conread position:
               
208-640
               

               
Cow position:
               
chr3:12711757-12712205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
98, 31
               

               
Conread position:
               
208-640
               

               
Cow position:
               
chr3:38347340-38346919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
98, 63
               

               
Conread position:
               
208-641
               

               
Cow position:
               
chr3:62884357-62883919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 65
               

               
Conread position:
               
209-518
               

               
Cow position:
               
chr3:73741710-73742014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
68, 201
               

               
Conread position:
               
209-620
               

               
Cow position:
               
chr3:51233926-51234357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
61, 100
               

               
Conread position:
               
209-640
               

               
Cow position:
               
chr3:8752944-8752517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 46
               

               
Conread position:
               
209-656
               

               
Cow position:
               
chr3:39171331-39171782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
105, 19
               

               
Conread position:
               
210-388
               

               
Cow position:
               
chr3:54126101-54126276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
210-415
               

               
Cow position:
               
chr3:77490729-77490528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
210-418
               

               
Cow position:
               
chr3:61411279-61411073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
72, 150
               

               
Conread position:
               
210-426
               

               
Cow position:
               
chr3:1004793-1004583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
162, 86
               

               
Conread position:
               
210-431
               

               
Cow position:
               
chr3:24539031-24538809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
210-449
               

               
Cow position:
               
chr3:58447909-58448142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
210-463
               

               
Cow position:
               
chr3:73436282-73436538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
74, 214
               

               
Conread position:
               
210-567
               

               
Cow position:
               
chr3:49131904-49132258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
67, 32
               

               
Conread position:
               
210-617
               

               
Cow position:
               
chr3:25091189-25090801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 24
               

               
Conread position:
               
210-621
               

               
Cow position:
               
chr3:50614800-50614377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 228
               

               
Conread position:
               
210-640
               

               
Cow position:
               
chr3:12255630-12255198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 36
               

               
Conread position:
               
210-644
               

               
Cow position:
               
chr3:77225271-77224834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 102
               

               
Conread position:
               
210-646
               

               
Cow position:
               
chr3:23111356-23111792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 36
               

               
Conread position:
               
210-646
               

               
Cow position:
               
chr3:59608655-59608219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 33
               

               
Conread position:
               
210-648
               

               
Cow position:
               
chr3:53428741-53429181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
66, 91
               

               
Conread position:
               
210-649
               

               
Cow position:
               
chr3:13329616-13330063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
66, 136
               

               
Conread position:
               
210-661
               

               
Cow position:
               
chr3:63146998-63147449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 35
               

               
Conread position:
               
210-692
               

               
Cow position:
               
chr3:23945277-23944766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 245
               

               
Conread position:
               
211-377
               

               
Cow position:
               
chr3:9127277-9127440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 123
               

               
Conread position:
               
211-454
               

               
Cow position:
               
chr3:18213981-18214228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
211-610
               

               
Cow position:
               
chr3:42584695-42584291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 86
               

               
Conread position:
               
211-628
               

               
Cow position:
               
chr3:51578147-51578591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
6, 238
               

               
Conread position:
               
211-632
               

               
Cow position:
               
chr3:22953728-22954124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
211-640
               

               
Cow position:
               
chr3:80565127-80564681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
211-643
               

               
Cow position:
               
chr3:29507739-29507311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 95
               

               
Conread position:
               
211-646
               

               
Cow position:
               
chr3:18393224-18393670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
12, 216
               

               
Conread position:
               
211-649
               

               
Cow position:
               
chr3:18459361-18459811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
62, 30
               

               
Conread position:
               
211-652
               

               
Cow position:
               
chr3:15228665-15229113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
69, 91
               

               
Conread position:
               
212-457
               

               
Cow position:
               
chr3:58291736-58291981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
72, 218
               

               
Conread position:
               
212-648
               

               
Cow position:
               
chr3:54862265-54862714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 43
               

               
Conread position:
               
212-682
               

               
Cow position:
               
chr3:17936672-17937162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 238
               

               
Conread position:
               
212-700
               

               
Cow position:
               
chr3:22271300-22271777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 55
               

               
Conread position:
               
213-640
               

               
Cow position:
               
chr3:20802466-20802911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
60, 154
               

               
Conread position:
               
213-661
               

               
Cow position:
               
chr3:54771155-54770706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
215-448
               

               
Cow position:
               
chr3:56483673-56483432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
62, 227
               

               
Conread position:
               
215-457
               

               
Cow position:
               
chr3:14505761-14506004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
69, 210
               

               
Conread position:
               
215-646
               

               
Cow position:
               
chr3:74533506-74533060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
55, 90
               

               
Conread position:
               
215-648
               

               
Cow position:
               
chr3:60597709-60597263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
47, 206
               

               
Conread position:
               
216-647
               

               
Cow position:
               
chr3:26835676-26836079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 51
               

               
Conread position:
               
216-647
               

               
Cow position:
               
chr3:30463005-30463455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
59, 41
               

               
Conread position:
               
216-656
               

               
Cow position:
               
chr3:31932953-31933400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
216-681
               

               
Cow position:
               
chr3:53509543-53510007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 37
               

               
Conread position:
               
217-659
               

               
Cow position:
               
chr3:45647836-45647376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 89
               

               
Conread position:
               
219-584
               

               
Cow position:
               
chr3:3736449-3736062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 211
               

               
Conread position:
               
220-507
               

               
Cow position:
               
chr3:25251053-25250760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
60, 171
               

               
Conread position:
               
221-594
               

               
Cow position:
               
chr3:11712107-11711718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
221-646
               

               
Cow position:
               
chr3:34085911-34086350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
222-649
               

               
Cow position:
               
chr3:26921057-26920606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
224-347
               

               
Cow position:
               
chr3:44643661-44643542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
224-414
               

               
Cow position:
               
chr3:10431744-10431554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
60, 136
               

               
Conread position:
               
224-459
               

               
Cow position:
               
chr3:34675867-34675630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
60, 199
               

               
Conread position:
               
224-459
               

               
Cow position:
               
chr3:39910915-39911147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
224-542
               

               
Cow position:
               
chr3:35278715-35278387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
53, 74
               

               
Conread position:
               
224-592
               

               
Cow position:
               
chr3:61009297-61009669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 43
               

               
Conread position:
               
225-429
               

               
Cow position:
               
chr3:6690394-6690191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
55, 145
               

               
Conread position:
               
225-618
               

               
Cow position:
               
chr3:45308066-45307675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
30, 40
               

               
Conread position:
               
225-661
               

               
Cow position:
               
chr3:52835737-52836205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 428
               

               
Conread position:
               
226-661
               

               
Cow position:
               
chr3:8394084-8393636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
228-378
               

               
Cow position:
               
chr3:74701205-74701353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
56, 126
               

               
Conread position:
               
228-547
               

               
Cow position:
               
chr3:53091619-53091312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
137, 20
               

               
Conread position:
               
228-646
               

               
Cow position:
               
chr3:4329461-4329048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 183
               

               
Conread position:
               
228-655
               

               
Cow position:
               
chr3:18458528-18458951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 18
               

               
Conread position:
               
229-381
               

               
Cow position:
               
chr3:22171513-22171367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
229-666
               

               
Cow position:
               
chr3:28898088-28898531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
99, 35
               

               
Conread position:
               
230-648
               

               
Cow position:
               
chr3:58767401-58766999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
13, 27
               

               
Conread position:
               
238-621
               

               
Cow position:
               
chr3:68262893-68262518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 35
               

               
Conread position:
               
239-475
               

               
Cow position:
               
chr3:58632691-58632463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
45, 116
               

               
Conread position:
               
240-648
               

               
Cow position:
               
chr3:53150458-53150037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
88, 13
               

               
Conread position:
               
241-640
               

               
Cow position:
               
chr3:61279033-61278624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 12
               

               
Conread position:
               
241-648
               

               
Cow position:
               
chr3:5100645-5101050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
242-366
               

               
Cow position:
               
chr3:74912980-74912855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
242-623
               

               
Cow position:
               
chr3:36204679-36204287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 164
               

               
Conread position:
               
242-656
               

               
Cow position:
               
chr3:78945713-78946137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
243-640
               

               
Cow position:
               
chr3:46094947-46094555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 92
               

               
Conread position:
               
246-558
               

               
Cow position:
               
chr3:50348076-50347771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
103, 84
               

               
Conread position:
               
247-599
               

               
Cow position:
               
chr3:78092390-78092746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
248-646
               

               
Cow position:
               
chr3:23477111-23476711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 152
               

               
Conread position:
               
248-648
               

               
Cow position:
               
chr3:23168953-23169360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
68, 16
               

               
Conread position:
               
249-632
               

               
Cow position:
               
chr3:47284949-47284564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
249-644
               

               
Cow position:
               
chr3:37452184-37451783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 29
               

               
Conread position:
               
249-648
               

               
Cow position:
               
chr3:58285789-58286188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 86
               

               
Conread position:
               
250-648
               

               
Cow position:
               
chr3:17222023-17222433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
14, 7
               

               
Conread position:
               
250-648
               

               
Cow position:
               
chr3:19711226-19711605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
106, 14
               

               
Conread position:
               
250-648
               

               
Cow position:
               
chr3:53270943-53270536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
250-660
               

               
Cow position:
               
chr3:8457773-8457354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 155
               

               
Conread position:
               
250-678
               

               
Cow position:
               
chr3:66707951-66708395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 19
               

               
Conread position:
               
251-639
               

               
Cow position:
               
chr3:59692004-59691623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
253-628
               

               
Cow position:
               
chr3:68627574-68627945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
253-646
               

               
Cow position:
               
chr3:37041534-37041141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
33, 11
               

               
Conread position:
               
256-388
               

               
Cow position:
               
chr3:5845031-5844899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
256-611
               

               
Cow position:
               
chr3:25755128-25754784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
256-674
               

               
Cow position:
               
chr3:33327822-33327391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 178
               

               
Conread position:
               
258-648
               

               
Cow position:
               
chr3:14465596-14465994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
6, 47
               

               
Conread position:
               
259-388
               

               
Cow position:
               
chr3:31750378-31750251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 52
               

               
Conread position:
               
259-639
               

               
Cow position:
               
chr3:23496471-23496837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 14
               

               
Conread position:
               
259-646
               

               
Cow position:
               
chr3:82474150-82473763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 97
               

               
Conread position:
               
259-650
               

               
Cow position:
               
chr3:1830466-1830855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
5, 27
               

               
Conread position:
               
260-567
               

               
Cow position:
               
chr3:55778140-55777825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
113, 25
               

               
Conread position:
               
260-628
               

               
Cow position:
               
chr3:1300324-1299963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 179
               

               
Conread position:
               
260-632
               

               
Cow position:
               
chr3:50462445-50462068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 165
               

               
Conread position:
               
261-659
               

               
Cow position:
               
chr3:51255887-51255483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 75
               

               
Conread position:
               
262-649
               

               
Cow position:
               
chr3:14552981-14552587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
44, 39
               

               
Conread position:
               
263-594
               

               
Cow position:
               
chr3:17447510-17447843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
45, 38
               

               
Conread position:
               
263-632
               

               
Cow position:
               
chr3:2506376-2506753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
43, 24
               

               
Conread position:
               
263-644
               

               
Cow position:
               
chr3:52863076-52863469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
18, 153
               

               
Conread position:
               
263-646
               

               
Cow position:
               
chr3:67704651-67704252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
45, 38
               

               
Conread position:
               
263-649
               

               
Cow position:
               
chr3:59630408-59630791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
43, 38
               

               
Conread position:
               
263-656
               

               
Cow position:
               
chr3:63179959-63179570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
37, 99
               

               
Conread position:
               
264-574
               

               
Cow position:
               
chr3:4319816-4319495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
268-638
               

               
Cow position:
               
chr3:16077973-16077618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 66
               

               
Conread position:
               
271-646
               

               
Cow position:
               
chr3:56059906-56059519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
37, 16
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr3:6690095-6689701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 33
               

               
Conread position:
               
273-567
               

               
Cow position:
               
chr3:15977268-15976960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
136, 12
               

               
Conread position:
               
273-646
               

               
Cow position:
               
chr3:35852376-35852755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 28
               

               
Conread position:
               
274-379
               

               
Cow position:
               
chr3:61116311-61116415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
274-585
               

               
Cow position:
               
chr3:15506542-15506221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
54, 74
               

               
Conread position:
               
274-648
               

               
Cow position:
               
chr3:4223394-4223025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 82
               

               
Conread position:
               
275-457
               

               
Cow position:
               
chr3:47679866-47680044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 129
               

               
Conread position:
               
275-632
               

               
Cow position:
               
chr3:38864219-38863839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
275-638
               

               
Cow position:
               
chr3:75158447-75158085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 10
               

               
Conread position:
               
275-648
               

               
Cow position:
               
chr3:31771778-31771410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
29, 152
               

               
Conread position:
               
275-666
               

               
Cow position:
               
chr3:83815696-83816101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
33, 9
               

               
Conread position:
               
276-611
               

               
Cow position:
               
chr3:74234278-74233943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
276-626
               

               
Cow position:
               
chr3:63237670-63238011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
276-642
               

               
Cow position:
               
chr3:82461271-82460899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 134
               

               
Conread position:
               
276-645
               

               
Cow position:
               
chr3:27785358-27784994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 58
               

               
Conread position:
               
277-402
               

               
Cow position:
               
chr3:49427893-49428019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
277-408
               

               
Cow position:
               
chr3:66145991-66145861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
277-545
               

               
Cow position:
               
chr3:4082009-4082281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 81
               

               
Conread position:
               
277-579
               

               
Cow position:
               
chr3:8790509-8790816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
182, 78
               

               
Conread position:
               
277-625
               

               
Cow position:
               
chr3:33632817-33633154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 46
               

               
Conread position:
               
277-632
               

               
Cow position:
               
chr3:17742581-17742235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 78
               

               
Conread position:
               
277-639
               

               
Cow position:
               
chr3:32596853-32597209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 59
               

               
Conread position:
               
277-640
               

               
Cow position:
               
chr3:59206327-59205959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
47, 8
               

               
Conread position:
               
277-645
               

               
Cow position:
               
chr3:46332070-46332409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
260, 8
               

               
Conread position:
               
277-646
               

               
Cow position:
               
chr3:66738849-66738485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 78
               

               
Conread position:
               
277-661
               

               
Cow position:
               
chr3:70129739-70130116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 78
               

               
Conread position:
               
277-661
               

               
Cow position:
               
chr3:73957106-73956723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 56
               

               
Conread position:
               
278-632
               

               
Cow position:
               
chr3:2392878-2393240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
60, 90
               

               
Conread position:
               
278-632
               

               
Cow position:
               
chr3:49328035-49327670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
278-640
               

               
Cow position:
               
chr3:17934848-17935205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
28, 23
               

               
Conread position:
               
278-646
               

               
Cow position:
               
chr3:59610628-59611004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
30, 23
               

               
Conread position:
               
278-656
               

               
Cow position:
               
chr3:17895938-17895556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
278-661
               

               
Cow position:
               
chr3:14601614-14602016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
28, 23
               

               
Conread position:
               
279-505
               

               
Cow position:
               
chr3:74035453-74035667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
279-517
               

               
Cow position:
               
chr3:15153780-15153534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
279-547
               

               
Cow position:
               
chr3:67930097-67930370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
279-563
               

               
Cow position:
               
chr3:11063454-11063174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 23
               

               
Conread position:
               
279-582
               

               
Cow position:
               
chr3:74561335-74561629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
199, 76
               

               
Conread position:
               
279-584
               

               
Cow position:
               
chr3:74134793-74134480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
279-596
               

               
Cow position:
               
chr3:27940054-27940365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
49, 95
               

               
Conread position:
               
279-597
               

               
Cow position:
               
chr3:71135875-71135550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
182, 82
               

               
Conread position:
               
279-609
               

               
Cow position:
               
chr3:15752547-15752878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
49, 95
               

               
Conread position:
               
279-610
               

               
Cow position:
               
chr3:52651991-52652325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
279-616
               

               
Cow position:
               
chr3:56476771-56476425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-617
               

               
Cow position:
               
chr3:8061215-8060874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-618
               

               
Cow position:
               
chr3:7337695-7338033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-618
               

               
Cow position:
               
chr3:52608271-52607924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-618
               

               
Cow position:
               
chr3:82019750-82020103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
56, 131
               

               
Conread position:
               
279-621
               

               
Cow position:
               
chr3:73395205-73394854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
49, 105
               

               
Conread position:
               
279-632
               

               
Cow position:
               
chr3:32585239-32584884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-632
               

               
Cow position:
               
chr3:54946220-54945851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
56, 150
               

               
Conread position:
               
279-632
               

               
Cow position:
               
chr3:81471007-81471374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
56, 135
               

               
Conread position:
               
279-637
               

               
Cow position:
               
chr3:82056030-82056396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
49, 91
               

               
Conread position:
               
279-638
               

               
Cow position:
               
chr3:17284916-17284556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 76
               

               
Conread position:
               
279-638
               

               
Cow position:
               
chr3:53046574-53046937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 154
               

               
Conread position:
               
279-638
               

               
Cow position:
               
chr3:57764306-57763943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
279-640
               

               
Cow position:
               
chr3:8393434-8393064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
279-640
               

               
Cow position:
               
chr3:48296787-48296429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
28, 22
               

               
Conread position:
               
279-640
               

               
Cow position:
               
chr3:66900644-66901024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
279-640
               

               
Cow position:
               
chr3:73709135-73708772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
279-645
               

               
Cow position:
               
chr3:53538600-53538236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 24
               

               
Conread position:
               
279-645
               

               
Cow position:
               
chr3:65237113-65236738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 23
               

               
Conread position:
               
279-645
               

               
Cow position:
               
chr3:73443007-73443374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
279-646
               

               
Cow position:
               
chr3:27274617-27274252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
84, 55
               

               
Conread position:
               
279-646
               

               
Cow position:
               
chr3:45690789-45691153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 44
               

               
Conread position:
               
279-646
               

               
Cow position:
               
chr3:45881987-45881621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-646
               

               
Cow position:
               
chr3:65969256-65968867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
56, 166
               

               
Conread position:
               
279-646
               

               
Cow position:
               
chr3:70401985-70401615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
279-647
               

               
Cow position:
               
chr3:59588599-59588230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-647
               

               
Cow position:
               
chr3:70565650-70566027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
49, 6
               

               
Conread position:
               
279-647
               

               
Cow position:
               
chr3:71497049-71497435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
279-647
               

               
Cow position:
               
chr3:80072218-80071828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr3:2008339-2007984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
176, 28
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr3:7566328-7566709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr3:11949287-11949643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 24
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr3:16752170-16752537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr3:31309265-31309644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
49, 149
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr3:48363161-48362793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
49, 127
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr3:55271956-55272330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr3:73777359-73776990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 77
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr3:83474834-83474459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-649
               

               
Cow position:
               
chr3:14263481-14263101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 23
               

               
Conread position:
               
279-650
               

               
Cow position:
               
chr3:59000668-59001037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 55
               

               
Conread position:
               
279-656
               

               
Cow position:
               
chr3:39969773-39970170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-656
               

               
Cow position:
               
chr3:58540433-58540828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
279-656
               

               
Cow position:
               
chr3:80581744-80581373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
279-660
               

               
Cow position:
               
chr3:58350661-58350286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 50
               

               
Conread position:
               
279-661
               

               
Cow position:
               
chr3:3738570-3738189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-682
               

               
Cow position:
               
chr3:58865385-58865783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 54
               

               
Conread position:
               
279-697
               

               
Cow position:
               
chr3:34271003-34270591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
18, 26
               

               
Conread position:
               
280-637
               

               
Cow position:
               
chr3:53222101-53221740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
48, 79
               

               
Conread position:
               
280-639
               

               
Cow position:
               
chr3:77365201-77365575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
280-642
               

               
Cow position:
               
chr3:75480087-75479728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 65
               

               
Conread position:
               
280-645
               

               
Cow position:
               
chr3:66292088-66292465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 85
               

               
Conread position:
               
280-646
               

               
Cow position:
               
chr3:42563540-42563162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 69
               

               
Conread position:
               
280-648
               

               
Cow position:
               
chr3:10958151-10958518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
6, 137
               

               
Conread position:
               
280-648
               

               
Cow position:
               
chr3:77271190-77271558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
26, 21
               

               
Conread position:
               
280-649
               

               
Cow position:
               
chr3:48241702-48241330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
27, 21
               

               
Conread position:
               
280-661
               

               
Cow position:
               
chr3:38691318-38691706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
48, 124
               

               
Conread position:
               
281-640
               

               
Cow position:
               
chr3:71231482-71231124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
25, 20
               

               
Conread position:
               
281-645
               

               
Cow position:
               
chr3:18067219-18066847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
281-648
               

               
Cow position:
               
chr3:210406-210032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
281-648
               

               
Cow position:
               
chr3:14626063-14626440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
17, 24
               

               
Conread position:
               
281-693
               

               
Cow position:
               
chr3:51598457-51598046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
175, 12
               

               
Conread position:
               
283-648
               

               
Cow position:
               
chr3:72676176-72675797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
23, 18
               

               
Conread position:
               
283-660
               

               
Cow position:
               
chr3:4032048-4031666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
27, 18
               

               
Conread position:
               
284-642
               

               
Cow position:
               
chr3:80740646-80740294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
45, 77
               

               
Conread position:
               
285-629
               

               
Cow position:
               
chr3:57624547-57624192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
285-650
               

               
Cow position:
               
chr3:76387526-76387904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
286-640
               

               
Cow position:
               
chr3:61840357-61840007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 15
               

               
Conread position:
               
288-627
               

               
Cow position:
               
chr3:14632908-14633255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
288-643
               

               
Cow position:
               
chr3:49139967-49140332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
13, 80
               

               
Conread position:
               
288-647
               

               
Cow position:
               
chr3:29596469-29596106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
288-648
               

               
Cow position:
               
chr3:72131218-72131590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 139
               

               
Conread position:
               
288-660
               

               
Cow position:
               
chr3:19006737-19006365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
41, 91
               

               
Conread position:
               
289-366
               

               
Cow position:
               
chr3:19564472-19564395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
78
               

               
Alignm identity:
               
72
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
289-641
               

               
Cow position:
               
chr3:27545740-27546116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
39, 210
               

               
Conread position:
               
289-648
               

               
Cow position:
               
chr3:63203512-63203155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
290-566
               

               
Cow position:
               
chr3:79376345-79376051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
143, 232
               

               
Conread position:
               
290-648
               

               
Cow position:
               
chr3:15684844-15685200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 147
               

               
Conread position:
               
290-658
               

               
Cow position:
               
chr3:44861234-44861606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 124
               

               
Conread position:
               
292-645
               

               
Cow position:
               
chr3:31907068-31907431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 128
               

               
Conread position:
               
292-666
               

               
Cow position:
               
chr3:38497997-38497644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
181, 39
               

               
Conread position:
               
293-560
               

               
Cow position:
               
chr3:7940482-7940757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
34, 104
               

               
Conread position:
               
293-640
               

               
Cow position:
               
chr3:39554259-39554599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
25, 118
               

               
Conread position:
               
293-648
               

               
Cow position:
               
chr3:61539876-61539506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
35, 59
               

               
Conread position:
               
294-566
               

               
Cow position:
               
chr3:10896897-10896621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 134
               

               
Conread position:
               
294-601
               

               
Cow position:
               
chr3:55835747-55836071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 7
               

               
Conread position:
               
294-617
               

               
Cow position:
               
chr3:71238226-71237899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 10
               

               
Conread position:
               
294-628
               

               
Cow position:
               
chr3:13301777-13302126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
34, 10
               

               
Conread position:
               
294-640
               

               
Cow position:
               
chr3:4461410-4461771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
41, 150
               

               
Conread position:
               
294-646
               

               
Cow position:
               
chr3:53739111-53739479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 7
               

               
Conread position:
               
294-646
               

               
Cow position:
               
chr3:79292902-79292546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
14, 7
               

               
Conread position:
               
294-648
               

               
Cow position:
               
chr3:58968829-58969182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 7
               

               
Conread position:
               
294-648
               

               
Cow position:
               
chr3:59101901-59101545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 7
               

               
Conread position:
               
294-656
               

               
Cow position:
               
chr3:56303-56667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
34, 128
               

               
Conread position:
               
294-656
               

               
Cow position:
               
chr3:5097281-5096905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
34, 122
               

               
Conread position:
               
294-656
               

               
Cow position:
               
chr3:15159105-15158743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
14, 7
               

               
Conread position:
               
294-659
               

               
Cow position:
               
chr3:45534222-45534600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
34, 119
               

               
Conread position:
               
294-660
               

               
Cow position:
               
chr3:65413204-65413577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
12, 7
               

               
Conread position:
               
295-604
               

               
Cow position:
               
chr3:32151963-32152266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
23, 113
               

               
Conread position:
               
295-621
               

               
Cow position:
               
chr3:49337793-49337468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
23, 45
               

               
Conread position:
               
295-632
               

               
Cow position:
               
chr3:74848977-74849312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
23, 128
               

               
Conread position:
               
295-638
               

               
Cow position:
               
chr3:23478300-23477955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 106
               

               
Conread position:
               
295-645
               

               
Cow position:
               
chr3:49650460-49650093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
33, 9
               

               
Conread position:
               
295-646
               

               
Cow position:
               
chr3:2025270-2024896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
33, 9
               

               
Conread position:
               
295-646
               

               
Cow position:
               
chr3:58206377-58206739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
23, 8
               

               
Conread position:
               
295-647
               

               
Cow position:
               
chr3:72473987-72473618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 9
               

               
Conread position:
               
295-648
               

               
Cow position:
               
chr3:2216440-2216070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
33, 9
               

               
Conread position:
               
295-648
               

               
Cow position:
               
chr3:3032479-3032108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 10
               

               
Conread position:
               
295-648
               

               
Cow position:
               
chr3:53113247-53112878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
33, 9
               

               
Conread position:
               
295-648
               

               
Cow position:
               
chr3:84153391-84153035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 87
               

               
Conread position:
               
295-652
               

               
Cow position:
               
chr3:42489228-42489600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
23, 154
               

               
Conread position:
               
295-656
               

               
Cow position:
               
chr3:73417588-73417224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
23, 45
               

               
Conread position:
               
295-659
               

               
Cow position:
               
chr3:42594579-42594957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
23, 148
               

               
Conread position:
               
295-666
               

               
Cow position:
               
chr3:60174413-60174779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
23, 100
               

               
Conread position:
               
296-603
               

               
Cow position:
               
chr3:80928870-80929195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
51, 104
               

               
Conread position:
               
296-646
               

               
Cow position:
               
chr3:12287295-12286947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
10, 43
               

               
Conread position:
               
296-648
               

               
Cow position:
               
chr3:53384209-53384573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
297-644
               

               
Cow position:
               
chr3:40345480-40345114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
22, 133
               

               
Conread position:
               
297-657
               

               
Cow position:
               
chr3:52721938-52722294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 60
               

               
Conread position:
               
299-538
               

               
Cow position:
               
chr3:70762053-70762302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
299-601
               

               
Cow position:
               
chr3:23444818-23445132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
9, 266
               

               
Conread position:
               
299-623
               

               
Cow position:
               
chr3:75080831-75080502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
299-638
               

               
Cow position:
               
chr3:55124212-55124558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 5
               

               
Conread position:
               
299-646
               

               
Cow position:
               
chr3:46901268-46900907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 103
               

               
Conread position:
               
299-646
               

               
Cow position:
               
chr3:55189683-55190038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
7, 132
               

               
Conread position:
               
299-648
               

               
Cow position:
               
chr3:50768749-50768389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
9, 111
               

               
Conread position:
               
300-640
               

               
Cow position:
               
chr3:34038129-34038470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
145, 5
               

               
Conread position:
               
300-646
               

               
Cow position:
               
chr3:54781934-54782300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 257
               

               
Conread position:
               
300-656
               

               
Cow position:
               
chr3:66649367-66649738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 138
               

               
Conread position:
               
301-386
               

               
Cow position:
               
chr3:77191123-77191038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
302-640
               

               
Cow position:
               
chr3:38253039-38252713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
47, 16
               

               
Conread position:
               
302-666
               

               
Cow position:
               
chr3:36174002-36174376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 133
               

               
Conread position:
               
303-613
               

               
Cow position:
               
chr3:80084113-80084430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
303-655
               

               
Cow position:
               
chr3:20437591-20437944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
303-677
               

               
Cow position:
               
chr3:44254374-44254749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
14, 131
               

               
Conread position:
               
304-640
               

               
Cow position:
               
chr3:26553651-26553990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
24, 91
               

               
Conread position:
               
304-646
               

               
Cow position:
               
chr3:30180150-30179794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
22, 120
               

               
Conread position:
               
304-648
               

               
Cow position:
               
chr3:70754422-70754075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
14, 99
               

               
Conread position:
               
305-618
               

               
Cow position:
               
chr3:26669053-26669365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
60, 37
               

               
Conread position:
               
305-638
               

               
Cow position:
               
chr3:78530605-78530256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 40
               

               
Conread position:
               
305-646
               

               
Cow position:
               
chr3:66375384-66375033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 106
               

               
Conread position:
               
305-648
               

               
Cow position:
               
chr3:59799311-59798964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 104
               

               
Conread position:
               
305-682
               

               
Cow position:
               
chr3:73759454-73759852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
23, 139
               

               
Conread position:
               
306-588
               

               
Cow position:
               
chr3:31287054-31287328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
306-648
               

               
Cow position:
               
chr3:2675091-2674739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
22, 104
               

               
Conread position:
               
307-632
               

               
Cow position:
               
chr3:56125794-56125473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
307-640
               

               
Cow position:
               
chr3:49383010-49382670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
307-646
               

               
Cow position:
               
chr3:54790021-54789687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
308-648
               

               
Cow position:
               
chr3:57577757-57577409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 117
               

               
Conread position:
               
309-647
               

               
Cow position:
               
chr3:72019175-72018834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 102
               

               
Conread position:
               
310-472
               

               
Cow position:
               
chr3:37873516-37873364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
310-555
               

               
Cow position:
               
chr3:77981259-77981501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 127
               

               
Conread position:
               
310-640
               

               
Cow position:
               
chr3:49460868-49461219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
310-677
               

               
Cow position:
               
chr3:15558015-15557647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
8, 123
               

               
Conread position:
               
311-660
               

               
Cow position:
               
chr3:74699326-74699697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 294
               

               
Conread position:
               
313-639
               

               
Cow position:
               
chr3:55460444-55460782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
48, 91
               

               
Conread position:
               
313-656
               

               
Cow position:
               
chr3:43007354-43007704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
20, 112
               

               
Conread position:
               
314-640
               

               
Cow position:
               
chr3:31206930-31206590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 129
               

               
Conread position:
               
314-647
               

               
Cow position:
               
chr3:25690847-25690499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 120
               

               
Conread position:
               
314-647
               

               
Cow position:
               
chr3:57754422-57754769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
14, 99
               

               
Conread position:
               
314-648
               

               
Cow position:
               
chr3:15954031-15954367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
14, 124
               

               
Conread position:
               
314-648
               

               
Cow position:
               
chr3:56582902-56582553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
14, 71
               

               
Conread position:
               
314-648
               

               
Cow position:
               
chr3:67929206-67929556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 119
               

               
Conread position:
               
315-648
               

               
Cow position:
               
chr3:13353414-13353070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 92
               

               
Conread position:
               
315-649
               

               
Cow position:
               
chr3:53790484-53790835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
13, 98
               

               
Conread position:
               
315-649
               

               
Cow position:
               
chr3:66609791-66610129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
13, 108
               

               
Conread position:
               
316-601
               

               
Cow position:
               
chr3:4555622-4555894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
43, 93
               

               
Conread position:
               
316-616
               

               
Cow position:
               
chr3:3690672-3690980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
33, 89
               

               
Conread position:
               
316-625
               

               
Cow position:
               
chr3:80818769-80818462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
12, 117
               

               
Conread position:
               
316-645
               

               
Cow position:
               
chr3:2628352-2628031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
149, 41
               

               
Conread position:
               
316-646
               

               
Cow position:
               
chr3:65800637-65800307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 42
               

               
Conread position:
               
316-647
               

               
Cow position:
               
chr3:69961668-69962000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
316-648
               

               
Cow position:
               
chr3:58954337-58954010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 93
               

               
Conread position:
               
316-653
               

               
Cow position:
               
chr3:7786641-7786975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 109
               

               
Conread position:
               
319-638
               

               
Cow position:
               
chr3:10347400-10347074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
323-646
               

               
Cow position:
               
chr3:68291601-68291278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
23, 86
               

               
Conread position:
               
325-646
               

               
Cow position:
               
chr3:67044055-67044383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
327-640
               

               
Cow position:
               
chr3:19708068-19708381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
93, 106
               

               
Conread position:
               
327-645
               

               
Cow position:
               
chr3:42178193-42177873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 59
               

               
Conread position:
               
327-646
               

               
Cow position:
               
chr3:53592649-53592988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
28, 115
               

               
Conread position:
               
327-646
               

               
Cow position:
               
chr3:60933457-60933126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
36, 88
               

               
Conread position:
               
327-647
               

               
Cow position:
               
chr3:79220898-79220560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
36, 78
               

               
Conread position:
               
327-649
               

               
Cow position:
               
chr3:73961657-73961970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 88
               

               
Conread position:
               
333-632
               

               
Cow position:
               
chr3:75057100-75057388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
140, 98
               

               
Conread position:
               
333-676
               

               
Cow position:
               
chr3:48269891-48269550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
82, 23
               

               
Conread position:
               
334-648
               

               
Cow position:
               
chr3:15571675-15571367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
184, 84
               

               
Conread position:
               
339-646
               

               
Cow position:
               
chr3:29807491-29807174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
130, 64
               

               
Conread position:
               
339-648
               

               
Cow position:
               
chr3:80081792-80082107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
340-648
               

               
Cow position:
               
chr3:69849484-69849792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
46, 66
               

               
Conread position:
               
342-646
               

               
Cow position:
               
chr3:46226481-46226181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 113
               

               
Conread position:
               
343-648
               

               
Cow position:
               
chr3:49218293-49218597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
349-639
               

               
Cow position:
               
chr3:22171205-22170908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 86
               

               
Conread position:
               
349-645
               

               
Cow position:
               
chr3:77227338-77227031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 25
               

               
Conread position:
               
352-616
               

               
Cow position:
               
chr3:22820582-22820312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
60, 7
               

               
Conread position:
               
355-618
               

               
Cow position:
               
chr3:7365880-7366134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
118, 54
               

               
Conread position:
               
358-614
               

               
Cow position:
               
chr3:52650523-52650788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
118, 51
               

               
Conread position:
               
358-627
               

               
Cow position:
               
chr3:17450934-17451203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
358-632
               

               
Cow position:
               
chr3:56703844-56704128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
7, 78
               

               
Conread position:
               
358-647
               

               
Cow position:
               
chr3:17952660-17952367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 26
               

               
Conread position:
               
358-647
               

               
Cow position:
               
chr3:55445366-55445078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
101, 47
               

               
Conread position:
               
359-580
               

               
Cow position:
               
chr3:6963747-6963523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 119
               

               
Conread position:
               
359-584
               

               
Cow position:
               
chr3:61913595-61913375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
109, 36
               

               
Conread position:
               
359-618
               

               
Cow position:
               
chr3:14625386-14625647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
94, 58
               

               
Conread position:
               
359-629
               

               
Cow position:
               
chr3:84000617-84000341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
114, 50
               

               
Conread position:
               
359-632
               

               
Cow position:
               
chr3:39066336-39066059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
109, 45
               

               
Conread position:
               
359-640
               

               
Cow position:
               
chr3:1498876-1498588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 76
               

               
Conread position:
               
359-640
               

               
Cow position:
               
chr3:60892629-60892351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
8, 55
               

               
Conread position:
               
359-646
               

               
Cow position:
               
chr3:16622029-16622316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
51, 74
               

               
Conread position:
               
359-648
               

               
Cow position:
               
chr3:5850925-5851217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
104, 45
               

               
Conread position:
               
359-648
               

               
Cow position:
               
chr3:54960193-54959901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
359-648
               

               
Cow position:
               
chr3:59451598-59451305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
101, 77
               

               
Conread position:
               
359-648
               

               
Cow position:
               
chr3:59515108-59514821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 54
               

               
Conread position:
               
359-650
               

               
Cow position:
               
chr3:9843591-9843292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
359-656
               

               
Cow position:
               
chr3:13478515-13478223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
118, 43
               

               
Conread position:
               
360-601
               

               
Cow position:
               
chr3:44932519-44932266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
23, 50
               

               
Conread position:
               
360-631
               

               
Cow position:
               
chr3:79207983-79208276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
360-639
               

               
Cow position:
               
chr3:68583001-68583283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
96, 23
               

               
Conread position:
               
360-639
               

               
Cow position:
               
chr3:81277695-81277985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
360-649
               

               
Cow position:
               
chr3:18763893-18763603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 49
               

               
Conread position:
               
360-656
               

               
Cow position:
               
chr3:17957470-17957169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
39, 69
               

               
Conread position:
               
361-620
               

               
Cow position:
               
chr3:67165921-67165651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
68, 6
               

               
Conread position:
               
361-638
               

               
Cow position:
               
chr3:5416218-5416511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
53, 73
               

               
Conread position:
               
361-649
               

               
Cow position:
               
chr3:7763658-7763372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
122, 43
               

               
Conread position:
               
364-611
               

               
Cow position:
               
chr3:47524507-47524759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
369-614
               

               
Cow position:
               
chr3:48578836-48578586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
10, 81
               

               
Conread position:
               
369-632
               

               
Cow position:
               
chr3:83442660-83442919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
113, 26
               

               
Conread position:
               
370-546
               

               
Cow position:
               
chr3:78647499-78647317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 35
               

               
Conread position:
               
373-640
               

               
Cow position:
               
chr3:51228148-51227873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
63, 37
               

               
Conread position:
               
373-648
               

               
Cow position:
               
chr3:57553858-57554137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
23, 29
               

               
Conread position:
               
374-632
               

               
Cow position:
               
chr3:43528247-43528511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
374-656
               

               
Cow position:
               
chr3:77467929-77467634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
85, 58
               

               
Conread position:
               
376-656
               

               
Cow position:
               
chr3:45744689-45744415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 52
               

               
Conread position:
               
378-630
               

               
Cow position:
               
chr3:2903308-2903562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
71, 31
               

               
Conread position:
               
384-638
               

               
Cow position:
               
chr3:42461679-42461420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
69, 17
               

               
Conread position:
               
385-640
               

               
Cow position:
               
chr3:81473992-81473722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
74, 47
               

               
Conread position:
               
390-646
               

               
Cow position:
               
chr3:22020998-22021261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
69, 45
               

               
Conread position:
               
390-648
               

               
Cow position:
               
chr3:24276672-24276417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
155, 13
               

               
Conread position:
               
391-646
               

               
Cow position:
               
chr3:34315982-34316252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
71, 48
               

               
Conread position:
               
393-656
               

               
Cow position:
               
chr3:32870121-32869851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 24
               

               
Conread position:
               
401-646
               

               
Cow position:
               
chr3:70467860-70468091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
102, 24
               

               
Conread position:
               
406-614
               

               
Cow position:
               
chr3:26970792-26970570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
408-656
               

               
Cow position:
               
chr3:42914403-42914155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
409-640
               

               
Cow position:
               
chr3:19789155-19789401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
409-647
               

               
Cow position:
               
chr3:4457117-4457365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
51, 11
               

               
Conread position:
               
409-648
               

               
Cow position:
               
chr3:34953603-34953364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
409-654
               

               
Cow position:
               
chr3:4332323-4332068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
410-643
               

               
Cow position:
               
chr3:2396821-2397068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
58, 46
               

               
Conread position:
               
410-646
               

               
Cow position:
               
chr3:41367027-41367271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
410-647
               

               
Cow position:
               
chr3:19198632-19198392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
30, 69
               

               
Conread position:
               
410-648
               

               
Cow position:
               
chr3:49793349-49793125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
410-666
               

               
Cow position:
               
chr3:78546145-78546402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
411-648
               

               
Cow position:
               
chr3:78077151-78076899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
7, 178
               

               
Conread position:
               
412-647
               

               
Cow position:
               
chr3:13899488-13899742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
412-648
               

               
Cow position:
               
chr3:27289894-27289647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
413-622
               

               
Cow position:
               
chr3:82043143-82043355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
127, 66
               

               
Conread position:
               
413-646
               

               
Cow position:
               
chr3:76188640-76188404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 23
               

               
Conread position:
               
413-656
               

               
Cow position:
               
chr3:54050070-54050317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
414-601
               

               
Cow position:
               
chr3:77006445-77006263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
59, 11
               

               
Conread position:
               
414-660
               

               
Cow position:
               
chr3:42603785-42603528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
48, 111
               

               
Conread position:
               
414-682
               

               
Cow position:
               
chr3:82359997-82359722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 130
               

               
Conread position:
               
415-632
               

               
Cow position:
               
chr3:36927191-36927400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
415-649
               

               
Cow position:
               
chr3:8753413-8753173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
415-682
               

               
Cow position:
               
chr3:30701260-30700998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
151, 48
               

               
Conread position:
               
421-640
               

               
Cow position:
               
chr3:24783720-24783499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 181
               

               
Conread position:
               
421-647
               

               
Cow position:
               
chr3:66116165-66116401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
38, 14
               

               
Conread position:
               
421-648
               

               
Cow position:
               
chr3:11020068-11019828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 5
               

               
Conread position:
               
421-658
               

               
Cow position:
               
chr3:71514876-71515114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
424-640
               

               
Cow position:
               
chr3:14801685-14801469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
58, 15
               

               
Conread position:
               
425-646
               

               
Cow position:
               
chr3:45312993-45312766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 55
               

               
Conread position:
               
426-597
               

               
Cow position:
               
chr3:4861625-4861451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
28, 10
               

               
Conread position:
               
434-646
               

               
Cow position:
               
chr3:83921132-83920910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
47, 41
               

               
Conread position:
               
434-648
               

               
Cow position:
               
chr3:66978771-66978553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
435-646
               

               
Cow position:
               
chr3:13118275-13118061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
435-648
               

               
Cow position:
               
chr3:37599493-37599706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 82
               

               
Conread position:
               
437-660
               

               
Cow position:
               
chr3:80655382-80655156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
22, 42
               

               
Conread position:
               
438-638
               

               
Cow position:
               
chr3:15746536-15746734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 25
               

               
Conread position:
               
438-648
               

               
Cow position:
               
chr3:27553470-27553261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 23
               

               
Conread position:
               
439-583
               

               
Cow position:
               
chr3:49428027-49428176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
439-617
               

               
Cow position:
               
chr3:3457849-3457655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 177
               

               
Conread position:
               
439-646
               

               
Cow position:
               
chr3:16115480-16115285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
439-646
               

               
Cow position:
               
chr3:48433880-48433656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
439-671
               

               
Cow position:
               
chr3:66885111-66885352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
31, 140
               

               
Conread position:
               
439-693
               

               
Cow position:
               
chr3:36032608-36032344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
30, 181
               

               
Conread position:
               
440-661
               

               
Cow position:
               
chr3:66964378-66964598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 7
               

               
Conread position:
               
442-647
               

               
Cow position:
               
chr3:15080819-15081028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
42, 105
               

               
Conread position:
               
446-646
               

               
Cow position:
               
chr3:53904102-53903898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
27, 106
               

               
Conread position:
               
448-661
               

               
Cow position:
               
chr3:48093979-48094195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 97
               

               
Conread position:
               
451-621
               

               
Cow position:
               
chr3:890746-890581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 91
               

               
Conread position:
               
451-646
               

               
Cow position:
               
chr3:76927469-76927283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
172, 20
               

               
Conread position:
               
453-628
               

               
Cow position:
               
chr3:35283184-35283367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 22
               

               
Conread position:
               
453-674
               

               
Cow position:
               
chr3:83698036-83698253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
197, 14
               

               
Conread position:
               
454-631
               

               
Cow position:
               
chr3:32399346-32399528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
455-616
               

               
Cow position:
               
chr3:74088262-74088431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
455-623
               

               
Cow position:
               
chr3:23270006-23269838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
455-626
               

               
Cow position:
               
chr3:70913169-70913347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
455-629
               

               
Cow position:
               
chr3:81940164-81939980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
17, 127
               

               
Conread position:
               
455-631
               

               
Cow position:
               
chr3:49731733-49731910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
455-632
               

               
Cow position:
               
chr3:16809877-16810065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
455-636
               

               
Cow position:
               
chr3:11422651-11422470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
87, 38
               

               
Conread position:
               
455-638
               

               
Cow position:
               
chr3:21302531-21302711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
159, 27
               

               
Conread position:
               
455-638
               

               
Cow position:
               
chr3:34392189-34392376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 92
               

               
Conread position:
               
455-638
               

               
Cow position:
               
chr3:46013038-46013235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
455-640
               

               
Cow position:
               
chr3:59208722-59208532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
455-642
               

               
Cow position:
               
chr3:75711219-75711035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
34, 104
               

               
Conread position:
               
455-644
               

               
Cow position:
               
chr3:23678483-23678675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
87, 53
               

               
Conread position:
               
455-645
               

               
Cow position:
               
chr3:79902414-79902216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
455-646
               

               
Cow position:
               
chr3:16004082-16004274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 111
               

               
Conread position:
               
455-646
               

               
Cow position:
               
chr3:25691662-25691461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
455-646
               

               
Cow position:
               
chr3:56704636-56704825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
455-648
               

               
Cow position:
               
chr3:16547586-16547386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
455-648
               

               
Cow position:
               
chr3:79591974-79592179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
455-650
               

               
Cow position:
               
chr3:11640341-11640142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
455-656
               

               
Cow position:
               
chr3:65581107-65581314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
19, 142
               

               
Conread position:
               
455-661
               

               
Cow position:
               
chr3:71430299-71430514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
455-682
               

               
Cow position:
               
chr3:19717184-19717401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 31
               

               
Conread position:
               
456-656
               

               
Cow position:
               
chr3:55815245-55815046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
28, 19
               

               
Conread position:
               
457-656
               

               
Cow position:
               
chr3:56102342-56102140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
24, 18
               

               
Conread position:
               
459-648
               

               
Cow position:
               
chr3:53572850-53573040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
23, 15
               

               
Conread position:
               
459-649
               

               
Cow position:
               
chr3:58158563-58158755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
23, 8
               

               
Conread position:
               
460-652
               

               
Cow position:
               
chr3:470522-470720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
461-631
               

               
Cow position:
               
chr3:76411143-76411322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 124
               

               
Conread position:
               
461-632
               

               
Cow position:
               
chr3:31559383-31559215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
461-640
               

               
Cow position:
               
chr3:55300854-55301032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
42, 7
               

               
Conread position:
               
461-661
               

               
Cow position:
               
chr3:52484520-52484318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
9, 34
               

               
Conread position:
               
463-620
               

               
Cow position:
               
chr3:45862902-45863061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
464-638
               

               
Cow position:
               
chr3:18607268-18607088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
464-640
               

               
Cow position:
               
chr3:23876891-23876716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 79
               

               
Conread position:
               
464-651
               

               
Cow position:
               
chr3:14445210-14445017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
19, 176
               

               
Conread position:
               
464-652
               

               
Cow position:
               
chr3:28928214-28928408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
464-656
               

               
Cow position:
               
chr3:60854945-60855136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
159, 15
               

               
Conread position:
               
465-640
               

               
Cow position:
               
chr3:6799118-6799282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
157, 20
               

               
Conread position:
               
465-648
               

               
Cow position:
               
chr3:77276512-77276694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
18, 38
               

               
Conread position:
               
467-647
               

               
Cow position:
               
chr3:79691139-79690963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 14
               

               
Conread position:
               
467-648
               

               
Cow position:
               
chr3:46160952-46161135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
22, 15
               

               
Conread position:
               
467-649
               

               
Cow position:
               
chr3:51033240-51033054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
468-632
               

               
Cow position:
               
chr3:37007213-37007373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
468-645
               

               
Cow position:
               
chr3:19560233-19560407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
74, 11
               

               
Conread position:
               
468-646
               

               
Cow position:
               
chr3:72604245-72604062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
469-632
               

               
Cow position:
               
chr3:7562027-7562185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
151, 13
               

               
Conread position:
               
469-645
               

               
Cow position:
               
chr3:43105461-43105289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
153, 12
               

               
Conread position:
               
469-661
               

               
Cow position:
               
chr3:63199391-63199200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
471-631
               

               
Cow position:
               
chr3:40754041-40753881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
5, 12
               

               
Conread position:
               
471-646
               

               
Cow position:
               
chr3:65020225-65020046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
471-648
               

               
Cow position:
               
chr3:72777136-72776950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
471-660
               

               
Cow position:
               
chr3:33693539-33693347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
472-648
               

               
Cow position:
               
chr3:51491353-51491174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
69, 106
               

               
Conread position:
               
474-616
               

               
Cow position:
               
chr3:44534882-44535022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
94, 104
               

               
Conread position:
               
474-640
               

               
Cow position:
               
chr3:40100787-40100956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 19
               

               
Conread position:
               
474-642
               

               
Cow position:
               
chr3:55107221-55107394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 10
               

               
Conread position:
               
474-648
               

               
Cow position:
               
chr3:52147791-52147966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
73, 155
               

               
Conread position:
               
475-636
               

               
Cow position:
               
chr3:75164028-75164188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
70, 18
               

               
Conread position:
               
475-644
               

               
Cow position:
               
chr3:3096467-3096633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
92, 15
               

               
Conread position:
               
475-646
               

               
Cow position:
               
chr3:60618505-60618338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
138, 41
               

               
Conread position:
               
475-648
               

               
Cow position:
               
chr3:57982918-57982743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
475-649
               

               
Cow position:
               
chr3:45333713-45333891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
478-648
               

               
Cow position:
               
chr3:14280725-14280554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
5, 78
               

               
Conread position:
               
479-646
               

               
Cow position:
               
chr3:40231814-40231641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
479-661
               

               
Cow position:
               
chr3:16885996-16886182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
19, 139
               

               
Conread position:
               
479-661
               

               
Cow position:
               
chr3:49307816-49307999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
44, 7
               

               
Conread position:
               
480-640
               

               
Cow position:
               
chr3:62611783-62611630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
142, 15
               

               
Conread position:
               
481-630
               

               
Cow position:
               
chr3:5899699-5899554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
481-632
               

               
Cow position:
               
chr3:61262681-61262529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
481-637
               

               
Cow position:
               
chr3:42483779-42483621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
481-645
               

               
Cow position:
               
chr3:8901297-8901134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
141, 74
               

               
Conread position:
               
481-646
               

               
Cow position:
               
chr3:24639471-24639302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
17, 100
               

               
Conread position:
               
481-647
               

               
Cow position:
               
chr3:31501229-31501064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
60, 95
               

               
Conread position:
               
481-648
               

               
Cow position:
               
chr3:22907953-22908124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 48
               

               
Conread position:
               
481-648
               

               
Cow position:
               
chr3:62826741-62826913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
481-648
               

               
Cow position:
               
chr3:78201149-78200977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
481-648
               

               
Cow position:
               
chr3:81371525-81371366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
141, 73
               

               
Conread position:
               
481-649
               

               
Cow position:
               
chr3:8147790-8147954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
481-658
               

               
Cow position:
               
chr3:29813122-29812944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
481-661
               

               
Cow position:
               
chr3:49388718-49388539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
481-661
               

               
Cow position:
               
chr3:51609699-51609513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
481-661
               

               
Cow position:
               
chr3:58383846-58383664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
482-617
               

               
Cow position:
               
chr3:4087291-4087424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
482-640
               

               
Cow position:
               
chr3:22872174-22872334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 91
               

               
Conread position:
               
482-641
               

               
Cow position:
               
chr3:27347427-27347584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
140, 11
               

               
Conread position:
               
482-648
               

               
Cow position:
               
chr3:17695126-17695296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
482-648
               

               
Cow position:
               
chr3:62999124-62999291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 145
               

               
Conread position:
               
482-650
               

               
Cow position:
               
chr3:51813616-51813785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
482-656
               

               
Cow position:
               
chr3:76285297-76285471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
24, 139
               

               
Conread position:
               
483-600
               

               
Cow position:
               
chr3:27453522-27453643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
483-628
               

               
Cow position:
               
chr3:64318932-64318792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 64
               

               
Conread position:
               
483-648
               

               
Cow position:
               
chr3:75143156-75143322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
484-663
               

               
Cow position:
               
chr3:45343020-45342840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
485-632
               

               
Cow position:
               
chr3:36729564-36729414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 77
               

               
Conread position:
               
485-644
               

               
Cow position:
               
chr3:50358849-50359013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
485-654
               

               
Cow position:
               
chr3:73936020-73936185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
136, 8
               

               
Conread position:
               
485-661
               

               
Cow position:
               
chr3:20405472-20405303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
486-632
               

               
Cow position:
               
chr3:74500101-74499950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 91
               

               
Conread position:
               
486-640
               

               
Cow position:
               
chr3:36656896-36657052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
486-642
               

               
Cow position:
               
chr3:41947246-41947405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
59, 15
               

               
Conread position:
               
486-645
               

               
Cow position:
               
chr3:72287-72128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
136, 69
               

               
Conread position:
               
486-645
               

               
Cow position:
               
chr3:54909438-54909277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
486-646
               

               
Cow position:
               
chr3:16157559-16157393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 95
               

               
Conread position:
               
486-648
               

               
Cow position:
               
chr3:48530510-48530348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
137, 148
               

               
Conread position:
               
486-648
               

               
Cow position:
               
chr3:68648038-68647870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
486-649
               

               
Cow position:
               
chr3:73305984-73305819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 51
               

               
Conread position:
               
486-657
               

               
Cow position:
               
chr3:22716407-22716576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
486-686
               

               
Cow position:
               
chr3:76092159-76091957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
487-612
               

               
Cow position:
               
chr3:12563350-12563226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
487-615
               

               
Cow position:
               
chr3:42050031-42050163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
487-645
               

               
Cow position:
               
chr3:61467481-61467322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
54, 140
               

               
Conread position:
               
487-646
               

               
Cow position:
               
chr3:19109608-19109452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
136, 112
               

               
Conread position:
               
487-647
               

               
Cow position:
               
chr3:62824611-62824772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
487-656
               

               
Cow position:
               
chr3:71104717-71104545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
54, 130
               

               
Conread position:
               
488-646
               

               
Cow position:
               
chr3:60389506-60389356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
488-693
               

               
Cow position:
               
chr3:24823849-24823636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 91
               

               
Conread position:
               
490-628
               

               
Cow position:
               
chr3:69207253-69207395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
490-632
               

               
Cow position:
               
chr3:82657217-82657359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
7, 35
               

               
Conread position:
               
490-637
               

               
Cow position:
               
chr3:42588219-42588070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
490-638
               

               
Cow position:
               
chr3:63861027-63861181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
490-643
               

               
Cow position:
               
chr3:41316155-41315999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
490-648
               

               
Cow position:
               
chr3:70333612-70333763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 25
               

               
Conread position:
               
490-656
               

               
Cow position:
               
chr3:15079199-15079366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
21, 38
               

               
Conread position:
               
492-618
               

               
Cow position:
               
chr3:9003074-9002946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
43, 61
               

               
Conread position:
               
493-616
               

               
Cow position:
               
chr3:31309023-31309146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
94, 117
               

               
Conread position:
               
493-617
               

               
Cow position:
               
chr3:5536040-5536168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
494-640
               

               
Cow position:
               
chr3:54570512-54570367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
129, 57
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr3:20659635-20659773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
495-633
               

               
Cow position:
               
chr3:58077588-58077723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
127, 35
               

               
Conread position:
               
495-638
               

               
Cow position:
               
chr3:41818228-41818370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
495-639
               

               
Cow position:
               
chr3:62233398-62233544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
495-645
               

               
Cow position:
               
chr3:36672135-36672292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
495-645
               

               
Cow position:
               
chr3:67161804-67161645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
495-646
               

               
Cow position:
               
chr3:15388079-15387922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
495-646
               

               
Cow position:
               
chr3:33253017-33253168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
119, 140
               

               
Conread position:
               
495-646
               

               
Cow position:
               
chr3:40827722-40827566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
495-646
               

               
Cow position:
               
chr3:47737025-47737174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
495-646
               

               
Cow position:
               
chr3:50329211-50329363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 79
               

               
Conread position:
               
495-647
               

               
Cow position:
               
chr3:6853644-6853791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
138, 33
               

               
Conread position:
               
495-647
               

               
Cow position:
               
chr3:51012669-51012822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
495-648
               

               
Cow position:
               
chr3:3164632-3164786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
495-648
               

               
Cow position:
               
chr3:3776902-3776744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
495-648
               

               
Cow position:
               
chr3:33698589-33698431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
495-648
               

               
Cow position:
               
chr3:38870598-38870444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
495-648
               

               
Cow position:
               
chr3:49119163-49119322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
51, 84
               

               
Conread position:
               
495-648
               

               
Cow position:
               
chr3:72926894-72927047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
144, 119
               

               
Conread position:
               
495-648
               

               
Cow position:
               
chr3:79884623-79884776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
70, 77
               

               
Conread position:
               
495-649
               

               
Cow position:
               
chr3:58951485-58951330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
495-655
               

               
Cow position:
               
chr3:49252640-49252801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
495-656
               

               
Cow position:
               
chr3:19822108-19822264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 34
               

               
Conread position:
               
495-693
               

               
Cow position:
               
chr3:202567-202766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 111
               

               
Conread position:
               
495-704
               

               
Cow position:
               
chr3:15661839-15662046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
121, 29
               

               
Conread position:
               
496-625
               

               
Cow position:
               
chr3:37580451-37580584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
496-639
               

               
Cow position:
               
chr3:20155692-20155549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
496-639
               

               
Cow position:
               
chr3:62272022-62272167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
496-644
               

               
Cow position:
               
chr3:364352-364505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
496-644
               

               
Cow position:
               
chr3:10215150-10215297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
126, 46
               

               
Conread position:
               
496-645
               

               
Cow position:
               
chr3:78242207-78242053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
496-646
               

               
Cow position:
               
chr3:35029232-35029387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 81
               

               
Conread position:
               
496-646
               

               
Cow position:
               
chr3:48900639-48900790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
62, 90
               

               
Conread position:
               
496-646
               

               
Cow position:
               
chr3:65276093-65276246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 17
               

               
Conread position:
               
496-647
               

               
Cow position:
               
chr3:59392243-59392396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 121
               

               
Conread position:
               
496-648
               

               
Cow position:
               
chr3:6403159-6403007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
126, 48
               

               
Conread position:
               
496-648
               

               
Cow position:
               
chr3:20129805-20129651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
496-648
               

               
Cow position:
               
chr3:45524126-45523974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 54
               

               
Conread position:
               
496-648
               

               
Cow position:
               
chr3:48852101-48852256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
43, 110
               

               
Conread position:
               
496-648
               

               
Cow position:
               
chr3:61857363-61857206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
496-649
               

               
Cow position:
               
chr3:31298293-31298451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
496-649
               

               
Cow position:
               
chr3:79148409-79148567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
496-700
               

               
Cow position:
               
chr3:18854955-18854753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
126, 48
               

               
Conread position:
               
496-706
               

               
Cow position:
               
chr3:27286092-27285879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
46, 159
               

               
Conread position:
               
497-632
               

               
Cow position:
               
chr3:84368512-84368643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
71, 51
               

               
Conread position:
               
497-641
               

               
Cow position:
               
chr3:77496683-77496534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
497-642
               

               
Cow position:
               
chr3:83369180-83369038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
125, 52
               

               
Conread position:
               
497-648
               

               
Cow position:
               
chr3:51604741-51604897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
497-651
               

               
Cow position:
               
chr3:9420090-9420237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
497-656
               

               
Cow position:
               
chr3:52816609-52816453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
124, 54
               

               
Conread position:
               
497-656
               

               
Cow position:
               
chr3:69420025-69420190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
497-661
               

               
Cow position:
               
chr3:72018776-72018608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
497-666
               

               
Cow position:
               
chr3:31419562-31419393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
125, 46
               

               
Conread position:
               
497-666
               

               
Cow position:
               
chr3:53222780-53222951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
498-647
               

               
Cow position:
               
chr3:55117107-55117261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
499-640
               

               
Cow position:
               
chr3:10088646-10088784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
124, 33
               

               
Conread position:
               
499-640
               

               
Cow position:
               
chr3:40687533-40687392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
499-648
               

               
Cow position:
               
chr3:83988340-83988191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 54
               

               
Conread position:
               
501-621
               

               
Cow position:
               
chr3:9638736-9638855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
501-633
               

               
Cow position:
               
chr3:7136575-7136708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
501-648
               

               
Cow position:
               
chr3:57022428-57022285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
501-648
               

               
Cow position:
               
chr3:61678547-61678401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
501-650
               

               
Cow position:
               
chr3:18887443-18887289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 144
               

               
Conread position:
               
502-631
               

               
Cow position:
               
chr3:30907778-30907908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
112, 85
               

               
Conread position:
               
502-666
               

               
Cow position:
               
chr3:55085326-55085490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 138
               

               
Conread position:
               
502-682
               

               
Cow position:
               
chr3:44623045-44623223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
161, 17
               

               
Conread position:
               
503-632
               

               
Cow position:
               
chr3:23887903-23887773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
503-648
               

               
Cow position:
               
chr3:45183992-45184135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
504-632
               

               
Cow position:
               
chr3:13350771-13350637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
505-640
               

               
Cow position:
               
chr3:2335140-2335002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
41, 113
               

               
Conread position:
               
506-652
               

               
Cow position:
               
chr3:31812613-31812464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
33, 89
               

               
Conread position:
               
508-677
               

               
Cow position:
               
chr3:17681017-17680844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
37, 134
               

               
Conread position:
               
513-648
               

               
Cow position:
               
chr3:29172226-29172093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
109, 15
               

               
Conread position:
               
513-656
               

               
Cow position:
               
chr3:49784157-49784013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
513-682
               

               
Cow position:
               
chr3:53508227-53508060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 102
               

               
Conread position:
               
530-654
               

               
Cow position:
               
chr3:27544500-27544625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
530-656
               

               
Cow position:
               
chr3:78894490-78894612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
531-661
               

               
Cow position:
               
chr3:51506828-51506697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               
Show alignments to all cow chromosomes.